FFCP PHASE1:Hg19::chr1:183622423..183622434,-: Difference between revisions
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|id=chr1:183622423..183622434,-
|short_description=p2@APOBEC4
|description=CAGE_peak_2_at_APOBEC4_5end
|association_with_transcript=13bp_to_ENST00000308641,NM_20345...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=403314 | |EntrezGene=403314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32152 | |HGNC=32152 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WW27 | |UniProt=Q8WW27 | ||
|association_with_transcript=13bp_to_ENST00000308641,NM_203454,uc001gqn.2_5end | |||
|cluster_id=chr1:183622423..183622434,- | |||
|coexpression_cluster_id=C111 | |||
|description=CAGE_peak_2_at_APOBEC4_5end | |||
|id=chr1:183622423..183622434,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.92e-26;10!UBERON:0005564;3.92e-26;10!UBERON:0007297;2.37e-15;2!UBERON:0008947;1.61e-09;29 | |||
|ontology_enrichment_disease=DOID:5409!1.17e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!2.65e-17!2;UBERON:0001301!1.12e-09!1;UBERON:0007023!1.50e-09!115;UBERON:0001154!2.55e-09!1;UBERON:0001153!2.55e-09!1;UBERON:0003135!2.19e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.16e-29;1!UBERON:0003135;7.72e-24;11!UBERON:0003127;1.15e-15;2!UBERON:0000473;3.06e-15;8!UBERON:0000991;7.13e-13;21!UBERON:0003101;2.54e-12;22!UBERON:0000079;2.54e-12;22!UBERON:0006947;1.09e-10;3!UBERON:0004054;1.09e-10;3!UBERON:0005904;2.43e-08;4!UBERON:0003133;1.11e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.37e-29,1;UBERON:0003135,7.14e-24,11;UBERON:0003127,1.15e-15,2;UBERON:0000473,3.06e-15,8;UBERON:0000991,7.43e-13,21;UBERON:0009196,7.43e-13,21;UBERON:0009117,7.43e-13,21;UBERON:0005564,7.43e-13,21;UBERON:0003101,2.44e-12,22;UBERON:0000079,2.44e-12,22;UBERON:0004176,2.64e-12,22;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0003133,6.31e-10,48;UBERON:0007023,3.60e-09,114;UBERON:0003886,7.12e-09,54;UBERON:0005904,2.26e-08,4;UBERON:0005178,3.24e-08,34;UBERON:0002224,3.24e-08,34;UBERON:0005156,3.70e-08,59;UBERON:0000990,3.70e-08,59;UBERON:0005181,5.33e-08,35;UBERON:0002553,6.64e-08,61;UBERON:0008947,2.04e-07,38;UBERON:0003258,2.04e-07,38 | |||
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|short_description=p2@APOBEC4 | |||
}} | }} |
Latest revision as of 04:00, 19 September 2015
Short description: | p2@APOBEC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_APOBEC4_5end |
Coexpression cluster: | C111_medulla_lung_trachea_testis_caudate_epididymis_throat |
Association with transcript: | 13bp_to_ENST00000308641, NM_203454, uc001gqn.2_5end |
EntrezGene: | APOBEC4 |
HGNC: | 32152 |
UniProt: | Q8WW27 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 2.37e-29 | 1 |
male reproductive organ | 7.14e-24 | 11 |
open tracheal system trachea | 1.15e-15 | 2 |
testis | 3.06e-15 | 8 |
gonad | 7.43e-13 | 21 |
indifferent external genitalia | 7.43e-13 | 21 |
indifferent gonad | 7.43e-13 | 21 |
gonad primordium | 7.43e-13 | 21 |
male organism | 2.44e-12 | 22 |
male reproductive system | 2.44e-12 | 22 |
external genitalia | 2.64e-12 | 22 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
reproductive organ | 6.31e-10 | 48 |
adult organism | 3.60e-09 | 114 |
body cavity precursor | 7.12e-09 | 54 |
duct of male reproductive system | 2.26e-08 | 4 |
thoracic cavity element | 3.24e-08 | 34 |
thoracic cavity | 3.24e-08 | 34 |
reproductive structure | 3.70e-08 | 59 |
reproductive system | 3.70e-08 | 59 |
thoracic segment organ | 5.33e-08 | 35 |
anatomical cavity | 6.64e-08 | 61 |
respiratory primordium | 2.04e-07 | 38 |
endoderm of foregut | 2.04e-07 | 38 |