FFCP PHASE1:Hg19::chr1:19803947..19803962,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:19803947..19803962,-
|short_description=p@chr1:19803947..19803962,-
|description=CAGE_peak_at_chr1:19803947..19803962,-
|association_with_transcript=NA
|E...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:19803947..19803962,- | |||
|coexpression_cluster_id=C694 | |||
|description=CAGE_peak_at_chr1:19803947..19803962,- | |||
|id=chr1:19803947..19803962,- | |||
|ontology_enrichment_celltype=CL:0000738!2.10e-37!140;CL:0000037!7.27e-32!172;CL:0000566!7.27e-32!172;CL:0000988!3.92e-31!182;CL:0002393!1.85e-30!9;CL:0002397!1.85e-30!9;CL:0002032!1.18e-26!165;CL:0000837!1.18e-26!165;CL:0002087!3.71e-26!119;CL:0002031!9.70e-25!124;CL:0000838!3.55e-16!52;CL:0000094!6.28e-16!8;CL:0000542!8.63e-16!53;CL:0000051!8.63e-16!53;CL:0000766!8.08e-15!76;CL:0000623!1.92e-12!3;CL:0000825!1.92e-12!3;CL:0000763!6.52e-12!112;CL:0000049!6.52e-12!112;CL:0000842!7.50e-12!3;CL:0000081!2.16e-11!11;CL:0000767!3.73e-11!3;CL:0002057!4.38e-11!42;CL:0000875!7.22e-11!3;CL:0002396!7.22e-11!3;CL:0000860!3.70e-10!45;CL:0000557!5.63e-10!71;CL:0000134!6.13e-10!358;CL:0002009!7.81e-10!65;CL:0000080!8.29e-10!6;CL:0002320!1.49e-09!365;CL:0000791!3.30e-09!18;CL:0000789!3.30e-09!18;CL:0002420!3.30e-09!18;CL:0002419!3.30e-09!18;CL:0000790!3.30e-09!18;CL:0000224!5.49e-09!4;CL:0000771!8.26e-09!2;CL:0001014!9.59e-09!2;CL:0001016!9.59e-09!2;CL:0000219!3.37e-08!390;CL:0000084!4.10e-08!25;CL:0000827!4.10e-08!25;CL:0000839!1.58e-07!70;CL:0002194!1.76e-07!63;CL:0000576!1.76e-07!63;CL:0000040!1.76e-07!63;CL:0000559!1.76e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000623;2.53e-31;3!CL:0000771;2.82e-21;2!CL:0001014;3.64e-21;2!CL:0001016;3.64e-21;2!CL:0000226;3.38e-14;3!CL:0000842;3.38e-14;3!CL:0000542;2.26e-13;53!CL:0000895;3.81e-11;1!CL:0000791;3.28e-09;18!CL:0000789;3.28e-09;18!CL:0002419;3.28e-09;18!CL:0000453;4.97e-09;5!CL:0000625;6.27e-09;11!CL:0000840;1.15e-07;5!CL:0002393;1.86e-07;6!CL:0002397;1.86e-07;6!CL:0000236;2.42e-07;13!CL:0000738;3.64e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,2.95e-31,3;CL:0000825,2.95e-31,3;CL:0000738,1.09e-23,136;CL:0000771,2.55e-21,2;CL:0001014,3.84e-21,2;CL:0001016,3.84e-21,2;CL:0000037,1.03e-18,168;CL:0000838,7.49e-18,52;CL:0000988,1.23e-17,177;CL:0000542,1.73e-17,53;CL:0000051,1.73e-17,53;CL:0002087,5.39e-17,115;CL:0002031,3.22e-16,120;CL:0002032,2.65e-15,161;CL:0000837,2.65e-15,161;CL:0000226,2.59e-14,3;CL:0000842,2.59e-14,3;CL:0000810,4.44e-11,1;CL:0000895,4.44e-11,1;CL:0002436,4.44e-11,1;CL:0002427,4.44e-11,1;CL:0002428,4.44e-11,1;CL:0002429,4.44e-11,1;CL:0002433,4.44e-11,1;CL:0002431,4.44e-11,1;CL:0002432,4.44e-11,1;CL:0002393,2.83e-10,9;CL:0002397,2.83e-10,9;CL:0000791,3.39e-09,18;CL:0000789,3.39e-09,18;CL:0002420,3.39e-09,18;CL:0002419,3.39e-09,18;CL:0000790,3.39e-09,18;CL:0000453,5.07e-09,5;CL:0000625,6.27e-09,11;CL:0000840,1.17e-07,5;CL:0001029,1.17e-07,5;CL:0000134,1.86e-07,354;CL:0002320,2.96e-07,361;CL:0000236,7.28e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.26e-13;53!CL:0002427;3.81e-11;1!CL:0000790;3.28e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.91e-15!102;UBERON:0003061!5.91e-15!102;UBERON:0002193!2.49e-14!112;UBERON:0002371!1.29e-09!80;UBERON:0002384!5.00e-09!375;UBERON:0001474!1.13e-08!86;UBERON:0002405!4.70e-08!115;UBERON:0004765!8.12e-07!101;UBERON:0001434!8.12e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.56e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0.293600439334847,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845021145247767,0.637812899895131,1.46761051855863,0.112328631146495,0,0.48217676009124,1.14005097496499,0.19891667719909,0.182664153764634,1.75996244461323,0,0,0,0,1.14950487990897,0,0,1.70763890732835,0.587237189370939,0.382273228125229,0,0,0,0.983548850569165,0,0.616804496998528,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,4.63695509416885,5.08136371988664,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,4.53170748464433,3.23441362289276,6.16046574142792,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,2.15714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,7.7380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.464448369948228,0,0,0,0,0,0.293600439334847,1.10799081706375,0.802177789880567,0.434021741431704,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845021145247767,0.637812899895131,1.46761051855863,0.112328631146495,0,0.48217676009124,1.14005097496499,0.19891667719909,0.182664153764634,1.75996244461323,0,0,0,0,1.14950487990897,0,0,1.70763890732835,0.587237189370939,0.382273228125229,0,0,0,0.983548850569165,0,0.616804496998528,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,1.14966148080576,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,4.63695509416885,5.08136371988664,2.02754165435919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,4.53170748464433,3.23441362289276,6.16046574142792,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,2.15714200818617,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99613798001194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,7.7380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:19803947..19803962,- | |||
}} | }} |
Latest revision as of 01:52, 28 July 2015
Short description: | p@chr1:19803947..19803962, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:19803947..19803962, - |
Coexpression cluster: | C694_immature_Natural_CD8_CD14_Eosinophils_Basophils_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.56e-07 | 371 |