FFCP PHASE1:Hg19::chr3:119500941..119500961,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8856 | |EntrezGene=8856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7968 | |HGNC=7968 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=59bp_to_ENST00000474090_5end | |association_with_transcript=59bp_to_ENST00000474090_5end | ||
|cluster_id=chr3:119500941..119500961,+ | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_NR1I2_5end | |description=CAGE_peak_1_at_NR1I2_5end | ||
|id=chr3:119500941..119500961,+ | |id=chr3:119500941..119500961,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.69e-19!12;CL:0000417!5.69e-19!12;CL:0000668!5.69e-19!12;CL:0000414!5.69e-19!12;CL:0000412!5.69e-19!12;CL:0000182!5.69e-19!12;CL:0000223!1.42e-10!59 | |ontology_enrichment_celltype=CL:0000181!5.69e-19!12;CL:0000417!5.69e-19!12;CL:0000668!5.69e-19!12;CL:0000414!5.69e-19!12;CL:0000412!5.69e-19!12;CL:0000182!5.69e-19!12;CL:0000223!1.42e-10!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;3.86e-34;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.67e-34,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.70e-37;11!UBERON:0009497;1.81e-31;13!UBERON:0003104;1.43e-12;31!UBERON:0006242;2.84e-10;1!UBERON:0001045;7.89e-10;1!UBERON:0001041;8.61e-10;30 | |||
|ontology_enrichment_disease=DOID:4929!3.50e-10!2;DOID:3119!7.41e-08!14 | |ontology_enrichment_disease=DOID:4929!3.50e-10!2;DOID:3119!7.41e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p1@NR1I2 | |short_description=p1@NR1I2 | ||
}} | }} |
Latest revision as of 21:18, 19 September 2015
Short description: | p1@NR1I2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NR1I2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 59bp_to_ENST00000474090_5end |
EntrezGene: | NR1I2 |
HGNC: | 7968 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.67e-34 | 12 |