FFCP PHASE1:Hg19::chr10:8097468..8097478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2625 | |EntrezGene=2625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4172 | |HGNC=4172 | ||
|TSSclassifier=strong | |||
|UniProt=P23771 | |UniProt=P23771 | ||
|association_with_transcript=1bp_to_X58072_5end | |association_with_transcript=1bp_to_X58072_5end | ||
|cluster_id=chr10:8097468..8097478,+ | |||
|coexpression_cluster_id=C981 | |coexpression_cluster_id=C981 | ||
|description=CAGE_peak_16_at_GATA3_5end | |description=CAGE_peak_16_at_GATA3_5end | ||
|id=chr10:8097468..8097478,+ | |id=chr10:8097468..8097478,+ | ||
|ontology_enrichment_celltype=CL:0002541!9.07e-12!3;CL:0002231!3.66e-10!3;CL:0000039!8.20e-08!7;CL:0000586!8.20e-08!7;CL:0002537!9.47e-07!5 | |ontology_enrichment_celltype=CL:0002541!9.07e-12!3;CL:0002231!3.66e-10!3;CL:0000039!8.20e-08!7;CL:0000586!8.20e-08!7;CL:0002537!9.47e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;5.98e-34;3!CL:0000349;1.91e-12;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,6.51e-34,3;CL:0000349,1.77e-12,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5093!1.02e-14!4;DOID:1612!1.02e-14!4 | |ontology_enrichment_disease=DOID:5093!1.02e-14!4;DOID:1612!1.02e-14!4 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.07e-55;4!DOID:1612;1.07e-55;4!DOID:299;1.41e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,9.73e-56,4;DOID:1612,9.73e-56,4;DOID:299,1.39e-09,25 | |||
|ontology_enrichment_uberon=UBERON:0005631!7.48e-19!14;UBERON:0000158!7.48e-19!14;UBERON:0003124!5.84e-18!7;UBERON:0000476!9.07e-12!3;UBERON:0000920!9.07e-12!3;UBERON:0000478!3.08e-10!24;UBERON:0000310!9.42e-09!10;UBERON:0001987!2.20e-08!4;UBERON:0004340!2.20e-08!4;UBERON:0003101!3.18e-08!22;UBERON:0000079!3.18e-08!22;UBERON:0001443!6.43e-08!11;UBERON:0006554!9.21e-07!44 | |ontology_enrichment_uberon=UBERON:0005631!7.48e-19!14;UBERON:0000158!7.48e-19!14;UBERON:0003124!5.84e-18!7;UBERON:0000476!9.07e-12!3;UBERON:0000920!9.07e-12!3;UBERON:0000478!3.08e-10!24;UBERON:0000310!9.42e-09!10;UBERON:0001987!2.20e-08!4;UBERON:0004340!2.20e-08!4;UBERON:0003101!3.18e-08!22;UBERON:0000079!3.18e-08!22;UBERON:0001443!6.43e-08!11;UBERON:0006554!9.21e-07!44 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.98e-34;3!UBERON:0000920;5.98e-34;3!UBERON:0005631;5.96e-23;10!UBERON:0000158;5.96e-23;10!UBERON:0000310;7.74e-23;10!UBERON:0001443;7.74e-21;11!UBERON:0000478;5.40e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,6.51e-34,3;UBERON:0000310,7.46e-23,10;UBERON:0001443,7.49e-21,11;UBERON:0005631,1.14e-16,14;UBERON:0000158,1.14e-16,14;UBERON:0003124,3.53e-15,7;UBERON:0000478,5.07e-10,24 | |||
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| ||
|short_description=p16@GATA3 | |short_description=p16@GATA3 | ||
}} | }} |
Latest revision as of 12:07, 19 September 2015
Short description: | p16@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GATA3_5end |
Coexpression cluster: | C981_choriocarcinoma_chorionic_pancreatic_placenta_amniotic_vagina_MCF7 |
Association with transcript: | 1bp_to_X58072_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | P23771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 6.51e-34 | 3 |
extraembryonic cell | 1.77e-12 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 6.51e-34 | 3 |
breast | 7.46e-23 | 10 |
chest | 7.49e-21 | 11 |
extraembryonic membrane | 1.14e-16 | 14 |
membranous layer | 1.14e-16 | 14 |
chorion | 3.53e-15 | 7 |
extraembryonic structure | 5.07e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 9.73e-56 | 4 |
breast cancer | 9.73e-56 | 4 |
adenocarcinoma | 1.39e-09 | 25 |