FFCP PHASE1:Hg19::chr8:86376137..86376142,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=760 | |EntrezGene=760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1373 | |HGNC=1373 | ||
|TSSclassifier=strong | |||
|UniProt=P00918 | |UniProt=P00918 | ||
|association_with_transcript=6bp_to_NM_000067,uc003ydk.2_5end | |association_with_transcript=6bp_to_NM_000067,uc003ydk.2_5end | ||
|cluster_id=chr8:86376137..86376142,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_4_at_CA2_5end | |description=CAGE_peak_4_at_CA2_5end | ||
|id=chr8:86376137..86376142,+ | |id=chr8:86376137..86376142,+ | ||
|ontology_enrichment_celltype=CL:0002009!3.91e-13!65;CL:0002194!3.99e-12!63;CL:0000576!3.99e-12!63;CL:0000040!3.99e-12!63;CL:0000559!3.99e-12!63;CL:0000839!1.28e-11!70;CL:0000557!6.22e-11!71;CL:0002057!1.02e-09!42;CL:0000763!9.98e-09!112;CL:0000049!9.98e-09!112;CL:0000766!1.18e-08!76;CL:0000860!1.68e-08!45 | |ontology_enrichment_celltype=CL:0002009!3.91e-13!65;CL:0002194!3.99e-12!63;CL:0000576!3.99e-12!63;CL:0000040!3.99e-12!63;CL:0000559!3.99e-12!63;CL:0000839!1.28e-11!70;CL:0000557!6.22e-11!71;CL:0002057!1.02e-09!42;CL:0000763!9.98e-09!112;CL:0000049!9.98e-09!112;CL:0000766!1.18e-08!76;CL:0000860!1.68e-08!45 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.74e-15;6!CL:0000764;4.42e-09;2!CL:0000558;4.42e-09;2!CL:0000473;3.22e-08;39!CL:0000234;3.22e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.06e-15,6;CL:0000764,4.45e-09,2;CL:0000765,4.45e-09,2;CL:0000050,4.45e-09,2;CL:0000038,4.45e-09,2;CL:0000558,4.45e-09,2;CL:0000547,4.45e-09,2;CL:0000549,4.45e-09,2;CL:0000550,4.45e-09,2;CL:0000552,4.45e-09,2;CL:0000839,6.22e-08,66;CL:0002009,2.10e-07,61;CL:0000473,3.11e-07,48;CL:0000234,3.11e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.41e-33!115;UBERON:0002390!1.23e-13!102;UBERON:0003061!1.23e-13!102;UBERON:0001049!3.29e-12!57;UBERON:0005068!3.29e-12!57;UBERON:0006241!3.29e-12!57;UBERON:0007135!3.29e-12!57;UBERON:0002020!5.44e-12!34;UBERON:0003528!5.44e-12!34;UBERON:0001893!1.28e-11!34;UBERON:0002193!2.22e-11!112;UBERON:0002791!2.76e-11!33;UBERON:0002780!1.99e-10!41;UBERON:0001890!1.99e-10!41;UBERON:0006240!1.99e-10!41;UBERON:0001017!3.13e-10!82;UBERON:0001869!3.26e-10!32;UBERON:0003080!5.66e-10!42;UBERON:0005743!8.33e-10!86;UBERON:0002616!1.21e-09!59;UBERON:0000955!3.52e-09!69;UBERON:0006238!3.52e-09!69;UBERON:0000178!3.67e-09!15;UBERON:0000179!3.67e-09!15;UBERON:0000463!3.67e-09!15;UBERON:0002371!2.39e-08!80;UBERON:0000956!8.56e-08!25;UBERON:0000203!8.56e-08!25;UBERON:0000073!1.10e-07!94;UBERON:0001016!1.10e-07!94;UBERON:0003075!1.33e-07!86;UBERON:0007284!1.33e-07!86;UBERON:0002619!2.12e-07!22;UBERON:0001474!2.16e-07!86;UBERON:0000468!4.92e-07!659;UBERON:0000153!7.07e-07!129;UBERON:0007811!7.07e-07!129;UBERON:0000922!8.63e-07!612;UBERON:0002346!9.04e-07!90;UBERON:0000033!9.54e-07!123 | |ontology_enrichment_uberon=UBERON:0007023!4.41e-33!115;UBERON:0002390!1.23e-13!102;UBERON:0003061!1.23e-13!102;UBERON:0001049!3.29e-12!57;UBERON:0005068!3.29e-12!57;UBERON:0006241!3.29e-12!57;UBERON:0007135!3.29e-12!57;UBERON:0002020!5.44e-12!34;UBERON:0003528!5.44e-12!34;UBERON:0001893!1.28e-11!34;UBERON:0002193!2.22e-11!112;UBERON:0002791!2.76e-11!33;UBERON:0002780!1.99e-10!41;UBERON:0001890!1.99e-10!41;UBERON:0006240!1.99e-10!41;UBERON:0001017!3.13e-10!82;UBERON:0001869!3.26e-10!32;UBERON:0003080!5.66e-10!42;UBERON:0005743!8.33e-10!86;UBERON:0002616!1.21e-09!59;UBERON:0000955!3.52e-09!69;UBERON:0006238!3.52e-09!69;UBERON:0000178!3.67e-09!15;UBERON:0000179!3.67e-09!15;UBERON:0000463!3.67e-09!15;UBERON:0002371!2.39e-08!80;UBERON:0000956!8.56e-08!25;UBERON:0000203!8.56e-08!25;UBERON:0000073!1.10e-07!94;UBERON:0001016!1.10e-07!94;UBERON:0003075!1.33e-07!86;UBERON:0007284!1.33e-07!86;UBERON:0002619!2.12e-07!22;UBERON:0001474!2.16e-07!86;UBERON:0000468!4.92e-07!659;UBERON:0000153!7.07e-07!129;UBERON:0007811!7.07e-07!129;UBERON:0000922!8.63e-07!612;UBERON:0002346!9.04e-07!90;UBERON:0000033!9.54e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.44e-21;15!UBERON:0000179;7.44e-21;15!UBERON:0000463;7.44e-21;15!UBERON:0001829;8.92e-09;2!UBERON:0002390;3.82e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.17e-21,15;UBERON:0000179,7.17e-21,15;UBERON:0000463,7.17e-21,15;UBERON:0007023,6.85e-18,114;UBERON:0002390,1.36e-13,98;UBERON:0003061,1.36e-13,98;UBERON:0002193,7.42e-12,108;UBERON:0001829,7.69e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0,0,0.464858073811369,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,1.72372840368309,1.29096936716765,2.70852973188684,0,0.545812300115692,0,1.22433556948361,1.60464513538047,1.91801137739712,0.329851300186716,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0,0.633765858935825,0.637812899895131,0.838634582033504,0.561643155732475,0,0,0.570025487482497,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,2.24803506515239,0.603173834469785,0.462942225792648,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0.790204397959275,1.71697232418975,1.23108503043699,1.8720341211139,0.594524649154913,0,0.16798212819886,0.425325291727159,0,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,2.19259876645935,2.3529190592241,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0.376575203107117,0.43050537267123,1.68471475667626,0.886860307073351,0,6.5968189200182,6.88173486428138,9.68400218196076,4.52640373369799,2.46817363851717,11.0240462902762,11.3406601820004,9.51750211553125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0.425846237690326,1.03051603426729,0.307240764308458,0.671028323677248,1.66849141711908,0,0.556812347790485,0,0,0,0,1.30998378285754,0.439524537815682,0,0.66866030566487,0,0.71623345421307,0,0.614321404198464,0,0.844016498463076,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0.716084698702437,0,0,21.5534783112246,0,0.969332746095218,0.74214478529481,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0,0.658156191461918,0,0,0.0769502585037971,0,0,0.359030577639089,0.108647371922008,0,0.183195186803725,1.5991043280559,0,0.156980256395025,0.498635045700469,0,0,0,0,0.635746315921515,0,0,0,0,1.99052386215701,0.796118080530053,1.22206028986725,0,0,0,0.67401132980677,0,1.40558667435203,0,0,0,1.57833761139756,1.20990716048664,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0,0.173559738335131,0.587954384486266,0.174118413160805,0.17472666824203,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.379864775735272,0,0,0.85381197895741,0,0.432271251462318,0,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,1.22583065500418,0.321506296930038,0,0.415440338029185,0.2249738915515,1.5476039091159,0.121499113316049,0,0.86686278029118,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,1.02586563574658,1.32506888912221,0.646414781807753,1.05786081394152,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,0.366078794705889,0.876336514945499,0.573409195690071,1.22021956690538,0.496771223531068,0.415045904808692,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.691292180758654,0,0.132864840313363,0.327130788511688,0,0,0,0.79994958341972,0.533458648470704,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.957803154342908,1.23069818544453,0,0.207471757392654,0.484426936895553,0,1.47221577751538,0.353909170043221,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0.202612753855184,0,0.413373593002368,0.507326481551255,0,4.38606213485746,0.992422356778588,0,0,0,0,0,0,0,0,0,0.475788130837822,0.328863867814245,0.354581522651905,0,0,0.314231179832004,0,0,0.431855182437243,0.955503375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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0.257575567634187,0,0,0,0.464858073811369,0.822335776043652,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,1.72372840368309,1.29096936716765,2.70852973188684,0,0.545812300115692,0,1.22433556948361,1.60464513538047,1.91801137739712,0.329851300186716,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0,0.633765858935825,0.637812899895131,0.838634582033504,0.561643155732475,0,0,0.570025487482497,0.99458338599545,0.365328307529268,0,0,0,0,0,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0.364295288292542,0.741568885568859,0.324547393654683,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.348581828608555,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,2.24803506515239,0.603173834469785,0.462942225792648,0,0,0,0.463721619900307,0,0.144366447761074,0,0,0.790204397959275,1.71697232418975,1.23108503043699,1.8720341211139,0.594524649154913,0,0.16798212819886,0.425325291727159,0,0,0.766765358330422,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.197030760201927,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.276242966807689,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0.223874754722178,2.19259876645935,2.3529190592241,0,0,0,0.309123034943167,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0.376575203107117,0.43050537267123,1.68471475667626,0.886860307073351,0,6.5968189200182,6.88173486428138,9.68400218196076,4.52640373369799,2.46817363851717,11.0240462902762,11.3406601820004,9.51750211553125,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0,0,0,0.425846237690326,1.03051603426729,0.307240764308458,0.671028323677248,1.66849141711908,0,0.556812347790485,0,0,0,0,1.30998378285754,0.439524537815682,0,0.66866030566487,0,0.71623345421307,0,0.614321404198464,0,0.844016498463076,0,0,0,0.19924798825107,1.10513566212459,0,0,0,0,0,0.716084698702437,0,0,21.5534783112246,0,0.969332746095218,0.74214478529481,0,0.260427761085233,0,0,0.227586896570999,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0,0.658156191461918,0,0,0.0769502585037971,0,0,0.359030577639089,0.108647371922008,0,0.183195186803725,1.5991043280559,0,0.156980256395025,0.498635045700469,0,0,0,0,0.635746315921515,0,0,0,0,1.99052386215701,0.796118080530053,1.22206028986725,0,0,0,0.67401132980677,0,1.40558667435203,0,0,0,1.57833761139756,1.20990716048664,0,0.126373159256976,0.150323419414493,0.103688191397247,0,0.330991955875499,0,0,0,0,0.173559738335131,0.587954384486266,0.174118413160805,0.17472666824203,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.379864775735272,0,0,0.85381197895741,0,0.432271251462318,0,0,0,0,0,0,0,0,0,1.20084057741958,0.821432273351958,0,0,0,0,0,0,0.199679000498991,0,0.446342914883745,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,1.22583065500418,0.321506296930038,0,0.415440338029185,0.2249738915515,1.5476039091159,0.121499113316049,0,0.86686278029118,0.524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0.410462603746695,0,0,1.02586563574658,1.32506888912221,0.646414781807753,1.05786081394152,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0.886068179966986,0.366078794705889,0.876336514945499,0.573409195690071,1.22021956690538,0.496771223531068,0.415045904808692,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0.219284049578707,0,0,0,0.256241518587947,0,0,0.691292180758654,0,0.132864840313363,0.327130788511688,0,0,0,0.79994958341972,0.533458648470704,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385375350578757,0,0.957803154342908,1.23069818544453,0,0.207471757392654,0.484426936895553,0,1.47221577751538,0.353909170043221,0,0,0,0,0,0,0,0,0.523813388962845,0,0,0.202612753855184,0,0.413373593002368,0.507326481551255,0,4.38606213485746,0.992422356778588,0,0,0,0,0,0,0,0,0,0.475788130837822,0.328863867814245,0.354581522651905,0,0,0.314231179832004,0,0,0.431855182437243,0.955503375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| ||
|short_description=p4@CA2 | |short_description=p4@CA2 | ||
}} | }} |
Latest revision as of 07:55, 19 September 2015
Short description: | p4@CA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CA2_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 6bp_to_NM_000067, uc003ydk.2_5end |
EntrezGene: | CA2 |
HGNC: | 1373 |
UniProt: | P00918 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.06e-15 | 6 |
erythroid lineage cell | 4.45e-09 | 2 |
erythroblast | 4.45e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 4.45e-09 | 2 |
erythroid progenitor cell | 4.45e-09 | 2 |
reticulocyte | 4.45e-09 | 2 |
proerythroblast | 4.45e-09 | 2 |
basophilic erythroblast | 4.45e-09 | 2 |
polychromatophilic erythroblast | 4.45e-09 | 2 |
orthochromatic erythroblast | 4.45e-09 | 2 |
myeloid lineage restricted progenitor cell | 6.22e-08 | 66 |
macrophage dendritic cell progenitor | 2.10e-07 | 61 |
defensive cell | 3.11e-07 | 48 |
phagocyte | 3.11e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
blood | 7.17e-21 | 15 |
haemolymphatic fluid | 7.17e-21 | 15 |
organism substance | 7.17e-21 | 15 |
adult organism | 6.85e-18 | 114 |
hematopoietic system | 1.36e-13 | 98 |
blood island | 1.36e-13 | 98 |
hemolymphoid system | 7.42e-12 | 108 |
major salivary gland | 7.69e-09 | 2 |