FFCP PHASE1:Hg19::chr1:209925409..209925446,+: Difference between revisions
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|id=chr1:209925409..209925446,+
|short_description=p@chr1:209925409..209925446,+
|description=CAGE_peak_at_chr1:209925409..209925446,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:209925409..209925446,+ | |||
|coexpression_cluster_id=C343 | |||
|description=CAGE_peak_at_chr1:209925409..209925446,+ | |||
|id=chr1:209925409..209925446,+ | |||
|ontology_enrichment_celltype=CL:0000080!1.58e-13!6;CL:0000945!9.75e-12!24;CL:0000826!9.75e-12!24;CL:0000838!1.91e-11!52;CL:0000542!3.33e-11!53;CL:0000051!3.33e-11!53;CL:0000946!2.08e-09!1;CL:0000786!2.08e-09!1;CL:0000980!2.08e-09!1;CL:0002127!2.26e-09!1;CL:0000914!2.26e-09!1;CL:0000911!2.26e-09!1;CL:0000814!2.26e-09!1;CL:0002042!2.26e-09!1;CL:0002039!2.26e-09!1;CL:0002040!2.26e-09!1;CL:0002041!2.26e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!5.79e-10!1;DOID:0060061!5.79e-10!1;DOID:8691!5.79e-10!1;DOID:4960!1.06e-09!1;DOID:0070004!1.06e-09!1;DOID:2355!2.46e-09!1;DOID:0060058!4.54e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:0060060;7.06e-34;1!DOID:0060061;7.06e-34;1!DOID:8691;7.06e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,9.85e-34,1;DOID:0060061,9.85e-34,1;DOID:8691,9.85e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0002331!2.58e-08!10;UBERON:0000358!2.58e-08!10;UBERON:0000307!2.58e-08!10;UBERON:0000091!2.58e-08!10;UBERON:0000087!2.58e-08!10;UBERON:0007806!2.58e-08!10;UBERON:0008780!2.58e-08!10;UBERON:0005728!2.58e-08!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.97e-14;10!UBERON:0000178;9.24e-10;15!UBERON:0000179;9.24e-10;15!UBERON:0000463;9.24e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.71e-14,10;UBERON:0000358,3.71e-14,10;UBERON:0000307,3.71e-14,10;UBERON:0000091,3.71e-14,10;UBERON:0000087,3.71e-14,10;UBERON:0007010,3.71e-14,10;UBERON:0007806,3.71e-14,10;UBERON:0008780,3.71e-14,10;UBERON:0005728,3.71e-14,10;UBERON:0000178,8.85e-10,15;UBERON:0000179,8.85e-10,15;UBERON:0000463,8.85e-10,15 | |||
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|short_description=p@chr1:209925409..209925446,+ | |||
}} | }} |
Latest revision as of 03:26, 28 July 2015
Short description: | p@chr1:209925409..209925446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:209925409..209925446, + |
Coexpression cluster: | C343_CD4_mycosis_kidney_signet_hairy_b_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.71e-14 | 10 |
blastocyst | 3.71e-14 | 10 |
blastula | 3.71e-14 | 10 |
bilaminar disc | 3.71e-14 | 10 |
inner cell mass | 3.71e-14 | 10 |
cleaving embryo | 3.71e-14 | 10 |
connecting stalk | 3.71e-14 | 10 |
inner cell mass derived epiblast | 3.71e-14 | 10 |
extraembryonic mesoderm | 3.71e-14 | 10 |
blood | 8.85e-10 | 15 |
haemolymphatic fluid | 8.85e-10 | 15 |
organism substance | 8.85e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 9.85e-34 | 1 |
cutaneous T cell lymphoma | 9.85e-34 | 1 |
mycosis fungoides | 9.85e-34 | 1 |