FFCP PHASE1:Hg19::chr10:126234575..126234586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64077 | |EntrezGene=64077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30042 | |HGNC=30042 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000482963_5end | |association_with_transcript=-7bp_to_ENST00000482963_5end | ||
|cluster_id=chr10:126234575..126234586,+ | |||
|coexpression_cluster_id=C1568 | |coexpression_cluster_id=C1568 | ||
|description=CAGE_peak_9_at_LHPP_5end | |description=CAGE_peak_9_at_LHPP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!7.65e-58!14;CL:0000945!8.79e-50!24;CL:0000826!8.79e-50!24;CL:0000838!9.93e-24!52;CL:0000542!3.31e-23!53;CL:0000051!3.31e-23!53;CL:0000785!1.32e-10!2;CL:0000955!1.32e-10!2;CL:0000818!1.32e-10!2;CL:0000954!1.32e-10!2;CL:0000816!1.32e-10!2;CL:0002087!1.67e-10!119;CL:0002031!6.69e-10!124;CL:0000738!2.15e-09!140;CL:0000817!2.41e-07!3;CL:0000037!7.35e-07!172;CL:0000566!7.35e-07!172 | |ontology_enrichment_celltype=CL:0000236!7.65e-58!14;CL:0000945!8.79e-50!24;CL:0000826!8.79e-50!24;CL:0000838!9.93e-24!52;CL:0000542!3.31e-23!53;CL:0000051!3.31e-23!53;CL:0000785!1.32e-10!2;CL:0000955!1.32e-10!2;CL:0000818!1.32e-10!2;CL:0000954!1.32e-10!2;CL:0000816!1.32e-10!2;CL:0002087!1.67e-10!119;CL:0002031!6.69e-10!124;CL:0000738!2.15e-09!140;CL:0000817!2.41e-07!3;CL:0000037!7.35e-07!172;CL:0000566!7.35e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.52e-75;13!CL:0000945;4.62e-68;24!CL:0000542;7.61e-23;53!CL:0000946;4.44e-11;1!CL:0000786;4.44e-11;1 | |ontology_enrichment_celltype_v019=CL:0000236;4.52e-75;13!CL:0000945;4.62e-68;24!CL:0000542;7.61e-23;53!CL:0000946;4.44e-11;1!CL:0000786;4.44e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.50e-84,14;CL:0000945,3.07e-68,24;CL:0000826,3.07e-68,24;CL:0000838,1.62e-30,52;CL:0000542,6.63e-30,53;CL:0000051,6.63e-30,53;CL:0002087,1.36e-12,115;CL:0002031,5.46e-12,120;CL:0000946,4.44e-11,1;CL:0000786,4.44e-11,1;CL:0000980,4.44e-11,1;CL:0000738,2.38e-10,136;CL:0002032,1.96e-08,161;CL:0000837,1.96e-08,161;CL:0000037,5.33e-08,168;CL:0000988,1.72e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;7.61e-23;53 | |ontology_enrichment_development_v019=CL:0000051;7.61e-23;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.27e-07!115 | |ontology_enrichment_uberon=UBERON:0007023!5.27e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.42e-11;1!UBERON:0001961;2.42e-11;1!UBERON:0001744;2.42e-11;1!UBERON:0001042;2.42e-11;1!UBERON:0001735;2.42e-11;1!UBERON:0000029;4.44e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0002372;2.42e-11;1!UBERON:0001961;2.42e-11;1!UBERON:0001744;2.42e-11;1!UBERON:0001042;2.42e-11;1!UBERON:0001735;2.42e-11;1!UBERON:0000029;4.44e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.42e-11,1;UBERON:0001961,2.42e-11,1;UBERON:0001744,2.42e-11,1;UBERON:0001735,2.42e-11,1;UBERON:0000029,4.01e-11,1 | |||
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|short_description=p9@LHPP | |short_description=p9@LHPP | ||
}} | }} |
Latest revision as of 22:20, 16 September 2015
Short description: | p9@LHPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LHPP_5end |
Coexpression cluster: | C1568_lymphoma_CD19_vein_tonsil_Burkitt_non_diffuse |
Association with transcript: | -7bp_to_ENST00000482963_5end |
EntrezGene: | LHPP |
HGNC: | 30042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.50e-84 | 14 |
lymphocyte of B lineage | 3.07e-68 | 24 |
pro-B cell | 3.07e-68 | 24 |
lymphoid lineage restricted progenitor cell | 1.62e-30 | 52 |
lymphocyte | 6.63e-30 | 53 |
common lymphoid progenitor | 6.63e-30 | 53 |
nongranular leukocyte | 1.36e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 5.46e-12 | 120 |
antibody secreting cell | 4.44e-11 | 1 |
plasma cell | 4.44e-11 | 1 |
plasmablast | 4.44e-11 | 1 |
leukocyte | 2.38e-10 | 136 |
hematopoietic oligopotent progenitor cell | 1.96e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-08 | 161 |
hematopoietic stem cell | 5.33e-08 | 168 |
hematopoietic cell | 1.72e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.42e-11 | 1 |
mucosa-associated lymphoid tissue | 2.42e-11 | 1 |
lymphoid tissue | 2.42e-11 | 1 |
tonsillar ring | 2.42e-11 | 1 |
lymph node | 4.01e-11 | 1 |