FFCP PHASE1:Hg19::chr7:84122033..84122049,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10371 | |EntrezGene=10371 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10723 | |HGNC=10723 | ||
|TSSclassifier=strong | |||
|UniProt=C9JD25 | |UniProt=C9JD25 | ||
|association_with_transcript=0bp_to_ENST00000424555_5end | |association_with_transcript=0bp_to_ENST00000424555_5end | ||
|cluster_id=chr7:84122033..84122049,- | |||
|description=CAGE_peak_9_at_SEMA3A_5end | |description=CAGE_peak_9_at_SEMA3A_5end | ||
|id=chr7:84122033..84122049,- | |id=chr7:84122033..84122049,- | ||
|ontology_enrichment_celltype=CL:0002620!1.08e-25!23;CL:0000057!2.82e-17!75;CL:0000055!1.14e-08!180;CL:0000667!2.08e-07!6;CL:0000058!2.08e-07!6;CL:0000138!2.08e-07!6;CL:0000153!9.00e-07!9;CL:0000447!9.00e-07!9 | |ontology_enrichment_celltype=CL:0002620!1.08e-25!23;CL:0000057!2.82e-17!75;CL:0000055!1.14e-08!180;CL:0000667!2.08e-07!6;CL:0000058!2.08e-07!6;CL:0000138!2.08e-07!6;CL:0000153!9.00e-07!9;CL:0000447!9.00e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.25e-27;23!CL:0000153;7.26e-10;9!CL:0000447;7.26e-10;9!CL:0000138;1.04e-09;6!CL:0000057;5.09e-09;73 | |ontology_enrichment_celltype_v019=CL:0002620;1.25e-27;23!CL:0000153;7.26e-10;9!CL:0000447;7.26e-10;9!CL:0000138;1.04e-09;6!CL:0000057;5.09e-09;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.04e-27,23;CL:0000057,5.43e-15,76;CL:0000153,6.87e-10,9;CL:0000447,6.87e-10,9;CL:0000058,9.72e-10,6;CL:0000138,9.72e-10,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!3.79e-09!5;DOID:450!3.79e-09!5;DOID:66!3.79e-09!5;DOID:423!3.79e-09!5;DOID:0080000!3.79e-09!5;DOID:11722!3.79e-09!5 | |ontology_enrichment_disease=DOID:17!3.79e-09!5;DOID:450!3.79e-09!5;DOID:66!3.79e-09!5;DOID:423!3.79e-09!5;DOID:0080000!3.79e-09!5;DOID:11722!3.79e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;5.58e-12;5!DOID:450;5.58e-12;5!DOID:66;5.58e-12;5!DOID:423;5.58e-12;5!DOID:0080000;5.58e-12;5!DOID:11722;5.58e-12;5 | |ontology_enrichment_disease_v019=DOID:17;5.58e-12;5!DOID:450;5.58e-12;5!DOID:66;5.58e-12;5!DOID:423;5.58e-12;5!DOID:0080000;5.58e-12;5!DOID:11722;5.58e-12;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,4.53e-12,5;DOID:450,4.53e-12,5;DOID:66,4.53e-12,5;DOID:423,4.53e-12,5;DOID:0080000,4.53e-12,5;DOID:11722,4.53e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.32e-20!45;UBERON:0002416!3.32e-20!45;UBERON:0002097!4.15e-20!40;UBERON:0003102!3.97e-18!95;UBERON:0002067!7.95e-08!9;UBERON:0004016!7.95e-08!9;UBERON:0010083!7.95e-08!9 | |ontology_enrichment_uberon=UBERON:0002199!3.32e-20!45;UBERON:0002416!3.32e-20!45;UBERON:0002097!4.15e-20!40;UBERON:0003102!3.97e-18!95;UBERON:0002067!7.95e-08!9;UBERON:0004016!7.95e-08!9;UBERON:0010083!7.95e-08!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002097;6.10e-16;41!UBERON:0002199;3.18e-14;46!UBERON:0002416;3.18e-14;46!UBERON:0003102;8.66e-13;50!UBERON:0000007;1.04e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0002097;6.10e-16;41!UBERON:0002199;3.18e-14;46!UBERON:0002416;3.18e-14;46!UBERON:0003102;8.66e-13;50!UBERON:0000007;1.04e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.63e-21,41;UBERON:0002199,1.55e-20,46;UBERON:0002416,1.55e-20,46;UBERON:0003102,8.82e-13,99;UBERON:0000007,7.92e-08,2;UBERON:0002384,2.67e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,0,0,0,0,1.36142988256051,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,0.50133791063589,6.22840031531542,2.3858578411533,2.43317435151318,0.0945348171640679,1.33037638477538,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,1.15235184896,0.468642863667593,0,0.570471821544449,0.298897361103602,0.469737994575059,1.13311061057692,0.702254033511242,2.85815839756851,0.122834317311768,0.826606249406124,0,0,0,0,1.85169725349473,0.750711119231785,1.93944880838928,0,0,0,0,0.358779271377724,1.92201649936711,8.68920794754204,4.80145753735044,9.78999027765169,6.69865404118636,8.18914167858995,6.91982962189192,1.94874010322397,7.06814567883521,12.9790357085642,14.3864990568743,1.77504796258307,2.21654616100809,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,10.7968512712843,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,1.97105174433142,0,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,3.15537356548735,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,2.01546198283421,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87101043758728,1.09917112082235,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32819215231533,0,0,0,0,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,0,0,0,0,0,2.29073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,4.89616023032527,6.2672473505675,3.36980134439808,3.60659893780785,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.672567444437648,1.82089681270989,2.95960848756687,1.86274977341542,0,0,0.135939465953663,0,0,0,0.078493092850514,0,3.64353812307926,1.82631744101899,0,0,0.214429632529969,0,0.348724276104376,1.56472445072321,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,1.60374807980835,0,0,0,0,0,0.647428837187895,0,1.1598144313382,3.88568794447312,0,0.198950775161368,0.475680363110274,0,0.219881033490858,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,8.2041212340456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,0,0,0.435433495793923,0,0.336760265072938,0.143444410785353,0.665320713092027,0,0,7.7228912914776,0,2.34640942403454,0,3.66206560484165,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,1.04474251279935,0,0,0,0,1.36142988256051,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53007406669196,0.50133791063589,6.22840031531542,2.3858578411533,2.43317435151318,0.0945348171640679,1.33037638477538,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756787138224657,1.15235184896,0.468642863667593,0,0.570471821544449,0.298897361103602,0.469737994575059,1.13311061057692,0.702254033511242,2.85815839756851,0.122834317311768,0.826606249406124,0,0,0,0,1.85169725349473,0.750711119231785,1.93944880838928,0,0,0,0,0.358779271377724,1.92201649936711,8.68920794754204,4.80145753735044,9.78999027765169,6.69865404118636,8.18914167858995,6.91982962189192,1.94874010322397,7.06814567883521,12.9790357085642,14.3864990568743,1.77504796258307,2.21654616100809,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,1.03993478527958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.531876233169741,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,10.7968512712843,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.695068915744663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0,1.97105174433142,0,0.929683027679674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0.214840489736547,0,0,0,0,0,0,0,0,0.94443704049192,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10222901961303,3.15537356548735,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,2.01546198283421,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87101043758728,1.09917112082235,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.32819215231533,0,0,0,0,0,0,0,0,0.290967049465258,0,0.677942222341597,0,0,0,0,0,0,0,0,2.29073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,4.89616023032527,6.2672473505675,3.36980134439808,3.60659893780785,0,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0,0,0,0.468334905806882,0,0,0,0,0.378806010550178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,1.05802783107205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0.672567444437648,1.82089681270989,2.95960848756687,1.86274977341542,0,0,0.135939465953663,0,0,0,0.078493092850514,0,3.64353812307926,1.82631744101899,0,0,0.214429632529969,0,0.348724276104376,1.56472445072321,0,0,0,0,0.430227358820278,0,0.0852134047591577,0,1.60374807980835,0,0,0,0,0,0.647428837187895,0,1.1598144313382,3.88568794447312,0,0.198950775161368,0.475680363110274,0,0.219881033490858,0,0,0,0,0.245148321753905,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,8.2041212340456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0.0620747142958579,0,0,0,0.435433495793923,0,0.336760265072938,0.143444410785353,0.665320713092027,0,0,7.7228912914776,0,2.34640942403454,0,3.66206560484165,0,0,0 | ||
|short_description=p9@SEMA3A | |short_description=p9@SEMA3A | ||
}} | }} |
Latest revision as of 19:49, 19 September 2015
Short description: | p9@SEMA3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SEMA3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000424555_5end |
EntrezGene: | SEMA3A |
HGNC: | 10723 |
UniProt: | C9JD25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.04e-27 | 23 |
fibroblast | 5.43e-15 | 76 |
GAG secreting cell | 6.87e-10 | 9 |
carbohydrate secreting cell | 6.87e-10 | 9 |
chondroblast | 9.72e-10 | 6 |
chondrocyte | 9.72e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.63e-21 | 41 |
integument | 1.55e-20 | 46 |
integumental system | 1.55e-20 | 46 |
surface structure | 8.82e-13 | 99 |
pituitary gland | 7.92e-08 | 2 |
connective tissue | 2.67e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.53e-12 | 5 |
myotonic disease | 4.53e-12 | 5 |
muscle tissue disease | 4.53e-12 | 5 |
myopathy | 4.53e-12 | 5 |
muscular disease | 4.53e-12 | 5 |
myotonic dystrophy | 4.53e-12 | 5 |