FFCP PHASE1:Hg19::chr11:1248582..1248591,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1248582..1248591,+ | |||
|coexpression_cluster_id=C251 | |coexpression_cluster_id=C251 | ||
|description=CAGE_peak_at_chr11:1248582..1248591,+ | |description=CAGE_peak_at_chr11:1248582..1248591,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.47e-30;1!UBERON:0008814;1.91e-15;2!UBERON:0010056;1.91e-15;2 | |ontology_enrichment_development_v019=UBERON:0006242;7.47e-30;1!UBERON:0008814;1.91e-15;2!UBERON:0010056;1.91e-15;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003127;6.35e-57;2!UBERON:0002372;2.05e-29;1!UBERON:0001961;2.05e-29;1!UBERON:0001744;2.05e-29;1!UBERON:0001042;2.05e-29;1!UBERON:0001735;2.05e-29;1!UBERON:0003126;4.02e-17;7!UBERON:0001005;4.02e-17;7!UBERON:0000341;1.91e-15;2!UBERON:0006562;1.91e-15;2!UBERON:0002110;6.73e-11;3!UBERON:0001723;9.43e-11;3!UBERON:0001033;9.43e-11;3!UBERON:0007196;1.59e-08;15!UBERON:0001558;1.59e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0003127;6.35e-57;2!UBERON:0002372;2.05e-29;1!UBERON:0001961;2.05e-29;1!UBERON:0001744;2.05e-29;1!UBERON:0001042;2.05e-29;1!UBERON:0001735;2.05e-29;1!UBERON:0003126;4.02e-17;7!UBERON:0001005;4.02e-17;7!UBERON:0000341;1.91e-15;2!UBERON:0006562;1.91e-15;2!UBERON:0002110;6.73e-11;3!UBERON:0001723;9.43e-11;3!UBERON:0001033;9.43e-11;3!UBERON:0007196;1.59e-08;15!UBERON:0001558;1.59e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,8.47e-57,2;UBERON:0002372,2.37e-29,1;UBERON:0001961,2.37e-29,1;UBERON:0001744,2.37e-29,1;UBERON:0001735,2.37e-29,1;UBERON:0003126,4.36e-17,7;UBERON:0001005,4.36e-17,7;UBERON:0000341,1.54e-15,2;UBERON:0001042,2.37e-12,10;UBERON:0009145,2.37e-12,10;UBERON:0006562,2.55e-11,11;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0001723,7.42e-11,3;UBERON:0001033,7.42e-11,3;UBERON:0010056,7.42e-11,3;UBERON:0000072,3.97e-10,47;UBERON:0000065,7.12e-09,54;UBERON:0007196,1.65e-08,15;UBERON:0001558,1.65e-08,15;UBERON:0001557,6.01e-07,19 | |||
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|short_description=p@chr11:1248582..1248591,+ | |short_description=p@chr11:1248582..1248591,+ | ||
}} | }} |
Latest revision as of 19:37, 23 July 2015
Short description: | p@chr11:1248582..1248591, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1248582..1248591, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 8.47e-57 | 2 |
tonsil | 2.37e-29 | 1 |
mucosa-associated lymphoid tissue | 2.37e-29 | 1 |
lymphoid tissue | 2.37e-29 | 1 |
tonsillar ring | 2.37e-29 | 1 |
trachea | 4.36e-17 | 7 |
respiratory airway | 4.36e-17 | 7 |
throat | 1.54e-15 | 2 |
chordate pharynx | 2.37e-12 | 10 |
pharyngeal region of foregut | 2.37e-12 | 10 |
pharynx | 2.55e-11 | 11 |
gallbladder | 6.73e-11 | 3 |
gall bladder primordium | 6.73e-11 | 3 |
tongue | 7.42e-11 | 3 |
gustatory system | 7.42e-11 | 3 |
future tongue | 7.42e-11 | 3 |
segment of respiratory tract | 3.97e-10 | 47 |
respiratory tract | 7.12e-09 | 54 |
tracheobronchial tree | 1.65e-08 | 15 |
lower respiratory tract | 1.65e-08 | 15 |
upper respiratory tract | 6.01e-07 | 19 |