FFCP PHASE1:Hg19::chr10:135267439..135267457,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q4G0T1 | |UniProt=Q4G0T1 | ||
|association_with_transcript=0bp_to_ENST00000333815,ENST00000463137_5end | |association_with_transcript=0bp_to_ENST00000333815,ENST00000463137_5end | ||
|cluster_id=chr10:135267439..135267457,+ | |||
|coexpression_cluster_id=C74 | |coexpression_cluster_id=C74 | ||
|description=CAGE_peak_1_at_ENST00000333815_5end,CAGE_peak_1_at_ENST00000463137_5end | |description=CAGE_peak_1_at_ENST00000333815_5end,CAGE_peak_1_at_ENST00000463137_5end | ||
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|ontology_enrichment_celltype=CL:0000838!1.35e-20!52;CL:0000542!4.77e-20!53;CL:0000051!4.77e-20!53;CL:0000037!7.95e-20!172;CL:0000566!7.95e-20!172;CL:0002032!2.97e-18!165;CL:0000837!2.97e-18!165;CL:0000988!7.03e-18!182;CL:0000791!2.67e-16!18;CL:0000789!2.67e-16!18;CL:0002420!2.67e-16!18;CL:0002419!2.67e-16!18;CL:0000790!2.67e-16!18;CL:0000084!7.87e-15!25;CL:0000827!7.87e-15!25;CL:0000738!1.64e-11!140;CL:0000625!9.97e-11!11;CL:0002087!3.05e-09!119;CL:0002031!2.03e-08!124 | |ontology_enrichment_celltype=CL:0000838!1.35e-20!52;CL:0000542!4.77e-20!53;CL:0000051!4.77e-20!53;CL:0000037!7.95e-20!172;CL:0000566!7.95e-20!172;CL:0002032!2.97e-18!165;CL:0000837!2.97e-18!165;CL:0000988!7.03e-18!182;CL:0000791!2.67e-16!18;CL:0000789!2.67e-16!18;CL:0002420!2.67e-16!18;CL:0002419!2.67e-16!18;CL:0000790!2.67e-16!18;CL:0000084!7.87e-15!25;CL:0000827!7.87e-15!25;CL:0000738!1.64e-11!140;CL:0000625!9.97e-11!11;CL:0002087!3.05e-09!119;CL:0002031!2.03e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.09e-22;25!CL:0000791;5.41e-21;18!CL:0000789;5.41e-21;18!CL:0002419;5.41e-21;18!CL:0000542;2.11e-11;53!CL:0000625;2.72e-11;11!CL:0000624;6.90e-08;6!CL:0000623;1.63e-07;3 | |ontology_enrichment_celltype_v019=CL:0000084;4.09e-22;25!CL:0000791;5.41e-21;18!CL:0000789;5.41e-21;18!CL:0002419;5.41e-21;18!CL:0000542;2.11e-11;53!CL:0000625;2.72e-11;11!CL:0000624;6.90e-08;6!CL:0000623;1.63e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.72e-24,52;CL:0000542,5.89e-24,53;CL:0000051,5.89e-24,53;CL:0000084,3.07e-22,25;CL:0000827,3.07e-22,25;CL:0000791,4.05e-21,18;CL:0000789,4.05e-21,18;CL:0002420,4.05e-21,18;CL:0002419,4.05e-21,18;CL:0000790,4.05e-21,18;CL:0000037,1.54e-17,168;CL:0002032,4.73e-17,161;CL:0000837,4.73e-17,161;CL:0000988,2.41e-16,177;CL:0000625,2.09e-11,11;CL:0000738,2.55e-10,136;CL:0002087,3.90e-10,115;CL:0002031,2.12e-08,120;CL:0000624,6.82e-08,6;CL:0000623,1.74e-07,3;CL:0000825,1.74e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.41e-21;18!CL:0000051;2.11e-11;53 | |ontology_enrichment_development_v019=CL:0000790;5.41e-21;18!CL:0000051;2.11e-11;53 | ||
|ontology_enrichment_disease=DOID:2531!1.68e-14!51;DOID:0060083!1.68e-14!51;DOID:1240!5.05e-12!39;DOID:8692!9.77e-11!31;DOID:1036!1.01e-08!8 | |ontology_enrichment_disease=DOID:2531!1.68e-14!51;DOID:0060083!1.68e-14!51;DOID:1240!5.05e-12!39;DOID:8692!9.77e-11!31;DOID:1036!1.01e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:1240;6.49e-12;39!DOID:2531;4.36e-11;51!DOID:0060083;4.36e-11;51!DOID:1036;2.56e-10;8!DOID:8692;4.97e-09;31!DOID:0060058;8.34e-09;10!DOID:630;8.57e-07;1!DOID:0050177;8.57e-07;1!DOID:0050427;8.57e-07;1!DOID:2355;9.29e-07;1 | |ontology_enrichment_disease_v019=DOID:1240;6.49e-12;39!DOID:2531;4.36e-11;51!DOID:0060083;4.36e-11;51!DOID:1036;2.56e-10;8!DOID:8692;4.97e-09;31!DOID:0060058;8.34e-09;10!DOID:630;8.57e-07;1!DOID:0050177;8.57e-07;1!DOID:0050427;8.57e-07;1!DOID:2355;9.29e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,7.42e-17,51;DOID:0060083,7.42e-17,51;DOID:1240,9.50e-14,39;DOID:1036,2.35e-10,8;DOID:8692,2.25e-09,31;DOID:0060058,8.35e-09,10;DOID:630,8.81e-07,1;DOID:0050177,8.81e-07,1;DOID:0050427,8.81e-07,1;DOID:2355,9.30e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@ENST00000333815,p1@ENST00000463137 | |short_description=p1@ENST00000333815,p1@ENST00000463137 | ||
}} | }} |
Latest revision as of 05:52, 17 September 2015
Short description: | p1@ENST00000333815, p1@ENST00000463137 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000333815_5end, CAGE_peak_1_at_ENST00000463137_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | 0bp_to_ENST00000333815, ENST00000463137_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.72e-24 | 52 |
lymphocyte | 5.89e-24 | 53 |
common lymphoid progenitor | 5.89e-24 | 53 |
T cell | 3.07e-22 | 25 |
pro-T cell | 3.07e-22 | 25 |
mature alpha-beta T cell | 4.05e-21 | 18 |
alpha-beta T cell | 4.05e-21 | 18 |
immature T cell | 4.05e-21 | 18 |
mature T cell | 4.05e-21 | 18 |
immature alpha-beta T cell | 4.05e-21 | 18 |
hematopoietic stem cell | 1.54e-17 | 168 |
hematopoietic oligopotent progenitor cell | 4.73e-17 | 161 |
hematopoietic multipotent progenitor cell | 4.73e-17 | 161 |
hematopoietic cell | 2.41e-16 | 177 |
CD8-positive, alpha-beta T cell | 2.09e-11 | 11 |
leukocyte | 2.55e-10 | 136 |
nongranular leukocyte | 3.90e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.12e-08 | 120 |
CD4-positive, alpha-beta T cell | 6.82e-08 | 6 |
natural killer cell | 1.74e-07 | 3 |
pro-NK cell | 1.74e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.42e-17 | 51 |
immune system cancer | 7.42e-17 | 51 |
leukemia | 9.50e-14 | 39 |
chronic leukemia | 2.35e-10 | 8 |
myeloid leukemia | 2.25e-09 | 31 |
lymphoma | 8.35e-09 | 10 |
genetic disease | 8.81e-07 | 1 |
monogenic disease | 8.81e-07 | 1 |
xeroderma pigmentosum | 8.81e-07 | 1 |
anemia | 9.30e-07 | 1 |