FFCP PHASE1:Hg19::chr6:10521618..10521627,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2651 | |EntrezGene=2651 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4204 | |HGNC=4204 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_ENST00000489819,uc003mza.2_5end | |association_with_transcript=-25bp_to_ENST00000489819,uc003mza.2_5end | ||
|cluster_id=chr6:10521618..10521627,+ | |||
|description=CAGE_peak_16_at_GCNT2_5end | |description=CAGE_peak_16_at_GCNT2_5end | ||
|id=chr6:10521618..10521627,+ | |id=chr6:10521618..10521627,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.72e-15!254;CL:0000039!2.43e-09!7;CL:0000586!2.43e-09!7;CL:0000223!6.21e-08!59;CL:0000083!7.78e-07!4 | |ontology_enrichment_celltype=CL:0000066!1.72e-15!254;CL:0000039!2.43e-09!7;CL:0000586!2.43e-09!7;CL:0000223!6.21e-08!59;CL:0000083!7.78e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.79e-20;7!CL:0000586;3.79e-20;7!CL:0002253;6.17e-09;2 | |ontology_enrichment_celltype_v019=CL:0000039;3.79e-20;7!CL:0000586;3.79e-20;7!CL:0002253;6.17e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.10e-20,7;CL:0000586,5.10e-20,7;CL:0002253,7.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.97e-17;1!UBERON:0010226;1.53e-16;1!UBERON:0009117;5.11e-07;10!UBERON:0005564;5.11e-07;10 | |ontology_enrichment_development_v019=UBERON:0004140;5.97e-17;1!UBERON:0010226;1.53e-16;1!UBERON:0009117;5.11e-07;10!UBERON:0005564;5.11e-07;10 | ||
|ontology_enrichment_disease=DOID:305!7.33e-11!106;DOID:0050687!6.23e-08!143;DOID:1793!7.78e-07!4 | |ontology_enrichment_disease=DOID:305!7.33e-11!106;DOID:0050687!6.23e-08!143;DOID:1793!7.78e-07!4 | ||
|ontology_enrichment_disease_v019=DOID:178;1.53e-16;1!DOID:326;1.53e-16;1!DOID:3978;1.53e-16;1!DOID:3394;1.53e-16;1!DOID:5844;1.53e-16;1!DOID:114;6.17e-09;2!DOID:3095;8.18e-07;22!DOID:2994;8.18e-07;22 | |ontology_enrichment_disease_v019=DOID:178;1.53e-16;1!DOID:326;1.53e-16;1!DOID:3978;1.53e-16;1!DOID:3394;1.53e-16;1!DOID:5844;1.53e-16;1!DOID:114;6.17e-09;2!DOID:3095;8.18e-07;22!DOID:2994;8.18e-07;22 | ||
|ontology_enrichment_disease_v019_2=DOID:178,1.04e-16,1;DOID:326,1.04e-16,1;DOID:3978,1.04e-16,1;DOID:3394,1.04e-16,1;DOID:5844,1.04e-16,1;DOID:114,5.08e-09,2;DOID:3095,8.96e-07,22;DOID:2994,8.96e-07,22 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002146;5.97e-17;1!UBERON:0005623;5.97e-17;1!UBERON:0002084;1.53e-16;1!UBERON:0002082;1.53e-16;1!UBERON:0007100;3.64e-10;25!UBERON:0000473;1.47e-08;8!UBERON:0000948;6.41e-07;22!UBERON:0003101;8.18e-07;22!UBERON:0000079;8.18e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002146;5.97e-17;1!UBERON:0005623;5.97e-17;1!UBERON:0002084;1.53e-16;1!UBERON:0002082;1.53e-16;1!UBERON:0007100;3.64e-10;25!UBERON:0000473;1.47e-08;8!UBERON:0000948;6.41e-07;22!UBERON:0003101;8.18e-07;22!UBERON:0000079;8.18e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,5.53e-17,1;UBERON:0005623,5.53e-17,1;UBERON:0002084,1.41e-16,1;UBERON:0002082,1.41e-16,1;UBERON:0010226,1.41e-16,1;UBERON:0007100,1.85e-09,27;UBERON:0000473,1.47e-08,8;UBERON:0003101,8.27e-07,22;UBERON:0000079,8.27e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0.175669571386252,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0.337834441449967,0,0.949265659568129,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0.232387885739037,0.10366105501537,0.756962552626885,0,0,0,0,0,0,0,0,0.241011029883482,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.219500570817251,0,0.201057944823262,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20859449591622,0.200506470303285,0.368323955743585,0,0,0,0,0,0,0,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0.522870902049801,0.512900250232778,0.656029291399411,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.495854746082934,0,0.382838137483752,0.2023155617111,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0.490080431962063,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0.69169171316418,0.538545866458633,1.08647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0.163232808159148,1.13082457147153,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0.19566461893209,0.971121518136371,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0,0.347119476670262,0.195984794828755,0,0,0.171986032471617,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0.391102765469606,0,0,0,0,0,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,2.29160424011684,0,1.79711100449092,0.429226048136571,0.89268582976749,2.08268764708851,0,0,0,0.164831716762333,0.0674035438541849,0.295282444544246,0.0846733320657845,0,0,0,0,0.83088067605837,0,0,0,0,0.236417121897595,0.367182116944987,0,0.179287339332845,0,0,1.32418394073086,0.5085370753095,0,0,0,1.19730191562487,0.082092520749339,0,0,0,0,0,0,0.342173675768659,0,0.640724475406168,1.88645166119599,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,4.32322026025361,0.219284049578707,0,0.192914038270915,0,0,0,0.303859956177382,0,0.389720617678777,0,0.163565394255844,0,0,0.845248493434508,0,0,0,0,0,0.979156554036111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0.236664001461131,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0.546327859818478,0,1.83579893535567,0,1.10273879441814,0.50141507858475,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,0,0,0,0,0.179650404213174,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p16@GCNT2 | |short_description=p16@GCNT2 | ||
}} | }} |
Latest revision as of 13:32, 19 September 2015
Short description: | p16@GCNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_GCNT2_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_ENST00000489819, uc003mza.2_5end |
EntrezGene: | GCNT2 |
HGNC: | 4204 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.10e-20 | 7 |
germ cell | 5.10e-20 | 7 |
epithelial cell of large intestine | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 5.53e-17 | 1 |
semi-lunar valve | 5.53e-17 | 1 |
heart left ventricle | 1.41e-16 | 1 |
cardiac ventricle | 1.41e-16 | 1 |
future cardiac ventricle | 1.41e-16 | 1 |
primary circulatory organ | 1.85e-09 | 27 |
testis | 1.47e-08 | 8 |
male organism | 8.27e-07 | 22 |
male reproductive system | 8.27e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.04e-16 | 1 |
ischemia | 1.04e-16 | 1 |
extrinsic cardiomyopathy | 1.04e-16 | 1 |
myocardial ischemia | 1.04e-16 | 1 |
myocardial infarction | 1.04e-16 | 1 |
heart disease | 5.08e-09 | 2 |
germ cell and embryonal cancer | 8.96e-07 | 22 |
germ cell cancer | 8.96e-07 | 22 |