FFCP PHASE1:Hg19::chr1:28503788..28503795,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:28503788..28503795,-
|short_description=p14@PTAFR
|description=CAGE_peak_14_at_PTAFR_5end
|association_with_transcript=-89bp_to_ENST00000373857_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5724 | |EntrezGene=5724 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9582 | |HGNC=9582 | ||
|TSSclassifier=strong | |||
|UniProt=P25105 | |UniProt=P25105 | ||
|association_with_transcript=-89bp_to_ENST00000373857_5end | |||
|cluster_id=chr1:28503788..28503795,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_14_at_PTAFR_5end | |||
|id=chr1:28503788..28503795,- | |||
|ontology_enrichment_celltype=CL:0000945!7.90e-18!24;CL:0000826!7.90e-18!24;CL:0000738!1.44e-17!140;CL:0000037!4.07e-17!172;CL:0000566!4.07e-17!172;CL:0002032!1.01e-16!165;CL:0000837!1.01e-16!165;CL:0000988!8.31e-16!182;CL:0002031!1.16e-15!124;CL:0002274!3.38e-15!5;CL:0000457!3.38e-15!5;CL:0002191!3.38e-15!5;CL:0000097!3.38e-15!5;CL:0000831!3.38e-15!5;CL:0002028!3.38e-15!5;CL:0002087!5.68e-12!119;CL:0000766!1.58e-11!76;CL:0000785!3.86e-10!2;CL:0000955!3.86e-10!2;CL:0000818!3.86e-10!2;CL:0000954!3.86e-10!2;CL:0000816!3.86e-10!2;CL:0000763!4.01e-10!112;CL:0000049!4.01e-10!112;CL:0000839!1.60e-09!70;CL:0000557!2.39e-09!71;CL:0000163!1.80e-08!9;CL:0000838!3.49e-07!52;CL:0000817!5.00e-07!3;CL:0000542!5.17e-07!53;CL:0000051!5.17e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.04e-20;5!CL:0000945;4.71e-17;24!CL:0000163;5.67e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.93e-21,5;CL:0002028,9.93e-21,5;CL:0000945,4.43e-17,24;CL:0000826,4.43e-17,24;CL:0000163,5.52e-12,9;CL:0000838,4.06e-08,52;CL:0000542,5.69e-08,53;CL:0000051,5.69e-08,53;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0002031,1.73e-07,120;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:74!4.04e-10!2;DOID:0060058!1.50e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:2355;8.64e-26;1!DOID:74;1.29e-13;2!DOID:1287;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2355,5.93e-26,1;DOID:74,1.07e-13,2;DOID:1287,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.22e-10!102;UBERON:0003061!4.22e-10!102;UBERON:0002193!7.39e-09!112;UBERON:0001474!2.13e-08!86;UBERON:0002371!5.52e-08!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p14@PTAFR | |||
}} | }} |
Latest revision as of 09:59, 17 September 2015
Short description: | p14@PTAFR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_PTAFR_5end |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | -89bp_to_ENST00000373857_5end |
EntrezGene: | PTAFR |
HGNC: | 9582 |
UniProt: | P25105 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.93e-21 | 5 |
basophil mast progenitor cell | 9.93e-21 | 5 |
lymphocyte of B lineage | 4.43e-17 | 24 |
pro-B cell | 4.43e-17 | 24 |
endocrine cell | 5.52e-12 | 9 |
lymphoid lineage restricted progenitor cell | 4.06e-08 | 52 |
lymphocyte | 5.69e-08 | 53 |
common lymphoid progenitor | 5.69e-08 | 53 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.73e-07 | 120 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
anemia | 5.93e-26 | 1 |
hematopoietic system disease | 1.07e-13 | 2 |
cardiovascular system disease | 1.69e-07 | 4 |