FFCP PHASE1:Hg19::chr11:1263559..1263572,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:1263559..1263572,+ | |||
|coexpression_cluster_id=C251 | |coexpression_cluster_id=C251 | ||
|description=CAGE_peak_at_chr11:1263559..1263572,+ | |description=CAGE_peak_at_chr11:1263559..1263572,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.82e-13;1!UBERON:0006595;3.14e-09;86!UBERON:0008814;3.38e-07;2!UBERON:0010056;3.38e-07;2!UBERON:0006965;3.93e-07;2 | |ontology_enrichment_development_v019=UBERON:0006242;1.82e-13;1!UBERON:0006595;3.14e-09;86!UBERON:0008814;3.38e-07;2!UBERON:0010056;3.38e-07;2!UBERON:0006965;3.93e-07;2 | ||
|ontology_enrichment_disease=DOID:3493!1.19e-09!2 | |ontology_enrichment_disease=DOID:3493!1.19e-09!2 | ||
|ontology_enrichment_disease_v019=DOID:3910;4.98e-07;2 | |ontology_enrichment_disease_v019=DOID:3910;4.98e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3910,4.69e-07,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003127;6.29e-25;2!UBERON:0002372;1.61e-13;1!UBERON:0001961;1.61e-13;1!UBERON:0001744;1.61e-13;1!UBERON:0001042;1.61e-13;1!UBERON:0001735;1.61e-13;1!UBERON:0002294;8.35e-08;7!UBERON:0001173;8.35e-08;7!UBERON:0003126;8.64e-08;7!UBERON:0001005;8.64e-08;7!UBERON:0007196;1.17e-07;15!UBERON:0001558;1.17e-07;15!UBERON:0006562;2.15e-07;2!UBERON:0000341;4.98e-07;2!UBERON:0004903;4.98e-07;2!UBERON:0002173;4.98e-07;2!UBERON:0002186;4.98e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0003127;6.29e-25;2!UBERON:0002372;1.61e-13;1!UBERON:0001961;1.61e-13;1!UBERON:0001744;1.61e-13;1!UBERON:0001042;1.61e-13;1!UBERON:0001735;1.61e-13;1!UBERON:0002294;8.35e-08;7!UBERON:0001173;8.35e-08;7!UBERON:0003126;8.64e-08;7!UBERON:0001005;8.64e-08;7!UBERON:0007196;1.17e-07;15!UBERON:0001558;1.17e-07;15!UBERON:0006562;2.15e-07;2!UBERON:0000341;4.98e-07;2!UBERON:0004903;4.98e-07;2!UBERON:0002173;4.98e-07;2!UBERON:0002186;4.98e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,5.58e-25,2;UBERON:0002372,1.61e-13,1;UBERON:0001961,1.61e-13,1;UBERON:0001744,1.61e-13,1;UBERON:0001735,1.61e-13,1;UBERON:0004921,1.65e-10,118;UBERON:0001007,5.12e-10,145;UBERON:0001555,5.12e-10,145;UBERON:0007026,5.12e-10,145;UBERON:0004119,6.29e-09,160;UBERON:0000925,6.29e-09,160;UBERON:0006595,6.29e-09,160;UBERON:0000072,1.04e-08,47;UBERON:0001041,7.54e-08,87;UBERON:0003126,8.35e-08,7;UBERON:0001005,8.35e-08,7;UBERON:0007196,1.12e-07,15;UBERON:0001558,1.12e-07,15;UBERON:0000065,1.58e-07,54;UBERON:0007023,2.55e-07,114;UBERON:0001004,3.23e-07,74;UBERON:0004903,4.69e-07,2;UBERON:0002173,4.69e-07,2;UBERON:0002186,4.69e-07,2;UBERON:0000341,4.98e-07,2 | |||
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| ||
|short_description=p@chr11:1263559..1263572,+ | |short_description=p@chr11:1263559..1263572,+ | ||
}} | }} |
Latest revision as of 19:46, 23 July 2015
Short description: | p@chr11:1263559..1263572, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:1263559..1263572, + |
Coexpression cluster: | C251_gall_tonsil_trachea_CD14_salivary_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 5.58e-25 | 2 |
tonsil | 1.61e-13 | 1 |
mucosa-associated lymphoid tissue | 1.61e-13 | 1 |
lymphoid tissue | 1.61e-13 | 1 |
tonsillar ring | 1.61e-13 | 1 |
subdivision of digestive tract | 1.65e-10 | 118 |
digestive system | 5.12e-10 | 145 |
digestive tract | 5.12e-10 | 145 |
primitive gut | 5.12e-10 | 145 |
endoderm-derived structure | 6.29e-09 | 160 |
endoderm | 6.29e-09 | 160 |
presumptive endoderm | 6.29e-09 | 160 |
segment of respiratory tract | 1.04e-08 | 47 |
foregut | 7.54e-08 | 87 |
trachea | 8.35e-08 | 7 |
respiratory airway | 8.35e-08 | 7 |
tracheobronchial tree | 1.12e-07 | 15 |
lower respiratory tract | 1.12e-07 | 15 |
respiratory tract | 1.58e-07 | 54 |
adult organism | 2.55e-07 | 114 |
respiratory system | 3.23e-07 | 74 |
bronchoalveolar duct junction | 4.69e-07 | 2 |
alveolar duct | 4.69e-07 | 2 |
bronchiole | 4.69e-07 | 2 |
throat | 4.98e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 4.69e-07 | 2 |