FFCP PHASE1:Hg19::chr11:2923619..2923628,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5002 | |EntrezGene=5002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10964 | |HGNC=10964 | ||
|TSSclassifier=strong | |||
|UniProt=Q96BI1 | |UniProt=Q96BI1 | ||
|association_with_transcript=-21bp_to_ENST00000380574_5end | |association_with_transcript=-21bp_to_ENST00000380574_5end | ||
|cluster_id=chr11:2923619..2923628,+ | |||
|description=CAGE_peak_7_at_SLC22A18_5end | |description=CAGE_peak_7_at_SLC22A18_5end | ||
|id=chr11:2923619..2923628,+ | |id=chr11:2923619..2923628,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.53e-12!254 | |ontology_enrichment_celltype=CL:0000066!3.53e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:0002567;9.76e-11;3!CL:0002573;1.96e-10;2!CL:0000167;1.90e-08;1!CL:0000164;1.90e-08;1!CL:0000502;1.90e-08;1!CL:0000172;1.90e-08;1!CL:0000173;1.90e-08;1 | |ontology_enrichment_celltype_v019=CL:0002567;9.76e-11;3!CL:0002573;1.96e-10;2!CL:0000167;1.90e-08;1!CL:0000164;1.90e-08;1!CL:0000502;1.90e-08;1!CL:0000172;1.90e-08;1!CL:0000173;1.90e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.41e-10,2;CL:0002567,1.41e-10,3;CL:0000167,2.84e-08,1;CL:0000164,2.84e-08,1;CL:0000502,2.84e-08,1;CL:0000172,2.84e-08,1;CL:0000173,2.84e-08,1;CL:0002351,2.84e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.90e-08;1!UBERON:0008425;1.90e-08;1 | |ontology_enrichment_development_v019=CL:0002351;1.90e-08;1!UBERON:0008425;1.90e-08;1 | ||
|ontology_enrichment_disease=DOID:305!5.71e-09!106;DOID:0050687!2.35e-08!143 | |ontology_enrichment_disease=DOID:305!5.71e-09!106;DOID:0050687!2.35e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.96e-10;3!DOID:127;1.96e-10;3!DOID:4430;1.90e-08;1!DOID:0060072;4.87e-08;4 | |ontology_enrichment_disease_v019=DOID:0060084;1.96e-10;3!DOID:127;1.96e-10;3!DOID:4430;1.90e-08;1!DOID:0060072;4.87e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.05e-10,3;DOID:127,1.05e-10,3;DOID:4430,2.84e-08,1;DOID:0060072,3.06e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001007!8.46e-13!155;UBERON:0001555!8.46e-13!155;UBERON:0007026!8.46e-13!155;UBERON:0004119!4.86e-12!169;UBERON:0000925!4.86e-12!169;UBERON:0006595!4.86e-12!169;UBERON:0004921!2.17e-08!129;UBERON:0004185!2.17e-08!129;UBERON:0005911!7.08e-07!82;UBERON:0000466!8.84e-07!126 | |ontology_enrichment_uberon=UBERON:0001007!8.46e-13!155;UBERON:0001555!8.46e-13!155;UBERON:0007026!8.46e-13!155;UBERON:0004119!4.86e-12!169;UBERON:0000925!4.86e-12!169;UBERON:0006595!4.86e-12!169;UBERON:0004921!2.17e-08!129;UBERON:0004185!2.17e-08!129;UBERON:0005911!7.08e-07!82;UBERON:0000466!8.84e-07!126 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.10e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0002423;4.10e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,3.22e-08,22;UBERON:0003894,3.22e-08,22;UBERON:0009854,7.51e-08,23;UBERON:0007499,3.34e-07,25;UBERON:0009497,3.34e-07,25;UBERON:0000015,3.34e-07,25;UBERON:0002423,3.34e-07,25;UBERON:0006235,3.34e-07,25;UBERON:0004161,3.34e-07,25;UBERON:0009856,6.46e-07,26 | |||
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| ||
|short_description=p7@SLC22A18 | |short_description=p7@SLC22A18 | ||
}} | }} |
Latest revision as of 13:14, 17 September 2015
Short description: | p7@SLC22A18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC22A18_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000380574_5end |
EntrezGene: | SLC22A18 |
HGNC: | 10964 |
UniProt: | Q96BI1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.41e-10 | 2 |
light melanocyte | 1.41e-10 | 3 |
peptide hormone secreting cell | 2.84e-08 | 1 |
enteroendocrine cell | 2.84e-08 | 1 |
type D enteroendocrine cell | 2.84e-08 | 1 |
somatostatin secreting cell | 2.84e-08 | 1 |
pancreatic D cell | 2.84e-08 | 1 |
progenitor cell of endocrine pancreas | 2.84e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 3.22e-08 | 22 |
liver primordium | 3.22e-08 | 22 |
digestive tract diverticulum | 7.51e-08 | 23 |
epithelial sac | 3.34e-07 | 25 |
epithelium of foregut-midgut junction | 3.34e-07 | 25 |
anatomical boundary | 3.34e-07 | 25 |
hepatobiliary system | 3.34e-07 | 25 |
foregut-midgut junction | 3.34e-07 | 25 |
septum transversum | 3.34e-07 | 25 |
sac | 6.46e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.05e-10 | 3 |
leiomyoma | 1.05e-10 | 3 |
somatostatinoma | 2.84e-08 | 1 |
benign neoplasm | 3.06e-08 | 4 |