FFCP PHASE1:Hg19::chr7:142498815..142498839,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=90bp_to_AJ568018_5end | |association_with_transcript=90bp_to_AJ568018_5end | ||
|cluster_id=chr7:142498815..142498839,+ | |||
|coexpression_cluster_id=C496 | |coexpression_cluster_id=C496 | ||
|description=CAGE_peak_1_at_AJ568018_5end | |description=CAGE_peak_1_at_AJ568018_5end | ||
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|ontology_enrichment_celltype=CL:0000542!5.60e-32!53;CL:0000051!5.60e-32!53;CL:0000838!5.68e-31!52;CL:0000084!7.03e-27!25;CL:0000827!7.03e-27!25;CL:0000791!1.62e-21!18;CL:0000789!1.62e-21!18;CL:0002420!1.62e-21!18;CL:0002419!1.62e-21!18;CL:0000790!1.62e-21!18;CL:0000738!7.61e-17!140;CL:0002087!1.95e-16!119;CL:0000625!4.73e-13!11;CL:0002031!1.62e-12!124;CL:0000988!6.76e-12!182;CL:0000037!1.04e-11!172;CL:0000566!1.04e-11!172;CL:0002032!4.40e-10!165;CL:0000837!4.40e-10!165;CL:0000624!3.60e-09!6 | |ontology_enrichment_celltype=CL:0000542!5.60e-32!53;CL:0000051!5.60e-32!53;CL:0000838!5.68e-31!52;CL:0000084!7.03e-27!25;CL:0000827!7.03e-27!25;CL:0000791!1.62e-21!18;CL:0000789!1.62e-21!18;CL:0002420!1.62e-21!18;CL:0002419!1.62e-21!18;CL:0000790!1.62e-21!18;CL:0000738!7.61e-17!140;CL:0002087!1.95e-16!119;CL:0000625!4.73e-13!11;CL:0002031!1.62e-12!124;CL:0000988!6.76e-12!182;CL:0000037!1.04e-11!172;CL:0000566!1.04e-11!172;CL:0002032!4.40e-10!165;CL:0000837!4.40e-10!165;CL:0000624!3.60e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.57e-45;25!CL:0000791;3.18e-40;18!CL:0000789;3.18e-40;18!CL:0002419;3.18e-40;18!CL:0000625;9.23e-27;11!CL:0000542;1.27e-26;53!CL:0000624;1.00e-17;6!CL:0000898;1.12e-09;3!CL:0000236;1.79e-09;13!CL:0000226;2.60e-09;3!CL:0000842;2.60e-09;3!CL:0000623;5.75e-09;3!CL:0000815;4.95e-07;2!CL:0000792;4.95e-07;2!CL:0002677;4.95e-07;2!CL:0002087;6.13e-07;104 | |ontology_enrichment_celltype_v019=CL:0000084;9.57e-45;25!CL:0000791;3.18e-40;18!CL:0000789;3.18e-40;18!CL:0002419;3.18e-40;18!CL:0000625;9.23e-27;11!CL:0000542;1.27e-26;53!CL:0000624;1.00e-17;6!CL:0000898;1.12e-09;3!CL:0000236;1.79e-09;13!CL:0000226;2.60e-09;3!CL:0000842;2.60e-09;3!CL:0000623;5.75e-09;3!CL:0000815;4.95e-07;2!CL:0000792;4.95e-07;2!CL:0002677;4.95e-07;2!CL:0002087;6.13e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000084,7.24e-45,25;CL:0000827,7.24e-45,25;CL:0000838,5.05e-44,52;CL:0000542,4.91e-43,53;CL:0000051,4.91e-43,53;CL:0000791,2.88e-40,18;CL:0000789,2.88e-40,18;CL:0002420,2.88e-40,18;CL:0002419,2.88e-40,18;CL:0000790,2.88e-40,18;CL:0000625,1.02e-26,11;CL:0002087,1.03e-20,115;CL:0000624,8.04e-18,6;CL:0000738,1.56e-17,136;CL:0002031,1.51e-15,120;CL:0000037,1.52e-12,168;CL:0000988,2.20e-12,177;CL:0000898,1.00e-09,3;CL:0002032,1.14e-09,161;CL:0000837,1.14e-09,161;CL:0000226,3.54e-09,3;CL:0000842,3.54e-09,3;CL:0000623,6.10e-09,3;CL:0000825,6.10e-09,3;CL:0000236,7.37e-09,14;CL:0000815,4.39e-07,2;CL:0000792,4.39e-07,2;CL:0002677,4.39e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;3.18e-40;18!CL:0000051;1.27e-26;53 | |ontology_enrichment_development_v019=CL:0000790;3.18e-40;18!CL:0000051;1.27e-26;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.98e-13!15;UBERON:0000179!6.98e-13!15;UBERON:0000463!6.98e-13!15;UBERON:0004177!6.25e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!6.98e-13!15;UBERON:0000179!6.98e-13!15;UBERON:0000463!6.98e-13!15;UBERON:0004177!6.25e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.84e-17;15!UBERON:0000179;6.84e-17;15!UBERON:0000463;6.84e-17;15!UBERON:0002390;1.00e-09;32!UBERON:0002370;1.08e-07;2!UBERON:0005058;1.08e-07;2!UBERON:0009113;1.08e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.84e-17;15!UBERON:0000179;6.84e-17;15!UBERON:0000463;6.84e-17;15!UBERON:0002390;1.00e-09;32!UBERON:0002370;1.08e-07;2!UBERON:0005058;1.08e-07;2!UBERON:0009113;1.08e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.04e-16,15;UBERON:0000179,1.04e-16,15;UBERON:0000463,1.04e-16,15;UBERON:0002370,7.44e-08,4;UBERON:0005058,7.44e-08,4;UBERON:0009113,7.44e-08,4;UBERON:0003295,7.44e-08,4;UBERON:0005562,7.44e-08,4 | |||
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|short_description=p1@AJ568018 | |short_description=p1@AJ568018 | ||
}} | }} |
Latest revision as of 06:58, 31 July 2015
Short description: | p1@AJ568018 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AJ568018_5end |
Coexpression cluster: | C496_thymus_CD4_CD8_hairy_vein_chronic_Peripheral |
Association with transcript: | 90bp_to_AJ568018_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 7.24e-45 | 25 |
pro-T cell | 7.24e-45 | 25 |
lymphoid lineage restricted progenitor cell | 5.05e-44 | 52 |
lymphocyte | 4.91e-43 | 53 |
common lymphoid progenitor | 4.91e-43 | 53 |
mature alpha-beta T cell | 2.88e-40 | 18 |
alpha-beta T cell | 2.88e-40 | 18 |
immature T cell | 2.88e-40 | 18 |
mature T cell | 2.88e-40 | 18 |
immature alpha-beta T cell | 2.88e-40 | 18 |
CD8-positive, alpha-beta T cell | 1.02e-26 | 11 |
nongranular leukocyte | 1.03e-20 | 115 |
CD4-positive, alpha-beta T cell | 8.04e-18 | 6 |
leukocyte | 1.56e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.51e-15 | 120 |
hematopoietic stem cell | 1.52e-12 | 168 |
hematopoietic cell | 2.20e-12 | 177 |
naive T cell | 1.00e-09 | 3 |
hematopoietic oligopotent progenitor cell | 1.14e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-09 | 161 |
single nucleate cell | 3.54e-09 | 3 |
mononuclear cell | 3.54e-09 | 3 |
natural killer cell | 6.10e-09 | 3 |
pro-NK cell | 6.10e-09 | 3 |
B cell | 7.37e-09 | 14 |
regulatory T cell | 4.39e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 4.39e-07 | 2 |
naive regulatory T cell | 4.39e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.04e-16 | 15 |
haemolymphatic fluid | 1.04e-16 | 15 |
organism substance | 1.04e-16 | 15 |
thymus | 7.44e-08 | 4 |
hemolymphoid system gland | 7.44e-08 | 4 |
thymic region | 7.44e-08 | 4 |
pharyngeal gland | 7.44e-08 | 4 |
thymus primordium | 7.44e-08 | 4 |