FFCP PHASE1:Hg19::chr1:52870063..52870102,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:52870063..52870102,-
|short_description=p1@ORC1
|description=CAGE_peak_1_at_ORC1_5end
|association_with_transcript=-4bp_to_ENST00000371566_5end
|EntrezGen...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4998 | |EntrezGene=4998 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8487 | |HGNC=8487 | ||
|TSSclassifier=strong | |||
|UniProt=Q13415 | |UniProt=Q13415 | ||
|association_with_transcript=-4bp_to_ENST00000371566_5end | |||
|cluster_id=chr1:52870063..52870102,- | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_ORC1_5end | |||
|id=chr1:52870063..52870102,- | |||
|ontology_enrichment_celltype=CL:0000012!4.70e-20!682;CL:0000548!9.99e-20!679;CL:0000004!9.99e-20!679;CL:0000255!9.99e-20!679;CL:0000066!2.78e-16!254;CL:0000003!1.64e-13!722;CL:0000063!6.67e-10!578;CL:0000144!1.72e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.97e-17,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!3.60e-48!235;DOID:14566!4.96e-46!239;DOID:2531!9.76e-26!51;DOID:0060083!9.76e-26!51;DOID:0050686!1.02e-23!137;DOID:0050687!2.20e-22!143;DOID:1240!6.17e-22!39;DOID:305!4.74e-20!106;DOID:8692!5.97e-18!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.51e-18;31!DOID:1240;4.89e-18;39!DOID:2531;1.70e-16;51!DOID:0060083;1.70e-16;51!DOID:305;7.08e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.96e-49,235;DOID:14566,2.93e-47,239;DOID:2531,6.06e-27,51;DOID:0060083,6.06e-27,51;DOID:0050686,3.90e-24,137;DOID:0050687,5.69e-23,143;DOID:1240,5.95e-23,39;DOID:305,1.10e-20,106;DOID:8692,9.12e-19,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.363356758541113,0.856402095563933,0.422863212287913,1.0007329835313,0,0,0,0.631719873426831,0,5.6518805395347,2.09340350391728,8.51921351307672,3.4289707169699,1.11389717664042,0.662794751455832,0,0,0.730310090387373,1.46379839637152,7.38726348460727,5.91602004608334,3.13454721478088,8.5870796139317,11.0868284309036,8.66244213204139,19.3325916542317,25.1227803716834,23.2196804875354,3.54027849164014,3.83829398097213,1.54816123316076,11.0330546937471,10.2410012384605,2.9580320813343,28.7403314152919,19.1928463858019,17.322425920756,0,0.802177789880567,0.434021741431704,0.447830948479849,0,0.515151135268373,0.436194716338694,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0.645484683583826,0,0.752969358170419,0,0.449446968890169,0.918251677112708,0.641858054152187,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0.422510572623884,0,0.419317291016752,1.12328631146495,0.150176892841506,0.32145117339416,0,0.59675003159727,0.365328307529268,1.75996244461323,0,0,0.426730222566507,0,1.72425731986345,0.661044872784862,0.954053754535364,0.569212969109448,1.17447437874188,0.382273228125229,0,3.92355994087075,17.3833495951551,0.786839080455332,0.393010762749165,1.43921049299656,2.00623794468814,0.977766799900771,0.473447805734733,0,4.2335973616366,1.17842362989935,0.664601683750863,0.270803863765016,6.02029202710673,6.24284868287415,7.07082989795807,4.14525026678773,6.0858648004361,0.444859689486181,0.802622484269139,1.04535523804977,8.7248193877126,1.14966148080576,1.71813722741315,0.253019692019503,0.637130828648193,0,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0.821127996921047,2.01606743224732,2.94184215361858,1.44824403882799,0,3.35350429851818,1.66221330396589,3.2529523714611,0,0.869079113764942,3.1811437882044,0.486634870302636,5.67208902984407,1.77383517970051,2.54720878510066,0.458426764241994,2.5500670180478,7.41568885568859,0.324547393654683,0.348259474598534,0.132957960518865,0.238490624305342,0,1.11437250398869,7.55297147993479,5.16140757063675,4.85996702250632,2.82653970962005,2.93649605346934,3.85165258716094,7.31482382878837,0.775250277507987,1.06729878806013,0.66944122552934,3.22263453687318,2.28081631715554,2.19655851793353,5.8826092855339,0,6.69747962130598,6.28682243353275,4.84229366078286,7.66583187329416,5.69559395740877,2.5648244150257,3.9534125230819,7.75560528296651,3.48875241714027,0,2.65924074495618,0.132409180813219,2.86836620748814,2.12801029319014,1.68203280042692,2.1349799145941,0.49333509683432,4.35695449559673,1.48181739276657,4.25000948094993,1.81628913173918,0,1.64025002283658,2.18512053781224,5.70471821544449,1.34503812496621,7.98554590777601,9.55050371771976,15.3091379305451,2.04154171254893,7.12439040408254,0.206651562351531,1.18800285728205,0.741800787835671,2.73048408581408,0.718618141816238,9.93183072328991,12.5118519871964,4.15596173226274,3.95079858792754,2.45190236639216,1.05166641234618,2.83580457900053,11.4809366840872,0.427114777637135,1.69545520927649,13.2040082277137,2.67936576019941,2.57640540045629,0,6.91982962189192,3.11798416515836,5.04867548488229,0.644349290496095,1.13152239773168,4.61512470271599,2.41805035746337,3.05209066158878,1.73934767846967,3.81844568827169,3.15485054927904,17.5642136826617,30.0842574089772,23.2387885739037,16.1711245823978,24.475122534936,23.3585509808531,0,1.92972281457866,4.14404764057442,0,0,15.7348044052992,14.4982833467167,13.014595613708,16.1029200189295,13.0727666455444,17.7952964333322,18.7415518342629,18.2485962566572,20.0068521612123,2.21446636387394,2.80483547606892,1.2347220339942,0,0,0,0,35.7585110525867,4.91953754172454,3.77449182656756,0.548751427043128,1.1240175325762,5.83068039987459,5.46271826435325,0.977424915930974,4.15973914111831,2.88662684050547,2.20267769452646,0.117408694235822,4.04226053731007,7.40776820122577,3.23432058798817,6.3216351836742,6.00940313466411,1.96973604869918,3.04205544681009,3.41851673264075,2.81201501960331,0,1.98485136139341,5.73174545298229,6.97521452433509,14.9519244874432,1.47798971368783,3.25779205848936,2.07328115540772,0.288239906833923,0.6312121671319,8.8262073066115,4.20187268114105,4.68869788840188,8.55362230113526,9.76861180681573,10.812350082381,0.571652865261156,13.9042544588247,6.10344096366592,16.0610845947881,0,0,12.67954128834,0.797814349754612,0,9.7738802219614,4.25547396069835,9.85762062359568,0.714889968290738,0,9.05564370458846,8.46914079163711,0.355391948742546,4.75171123760058,0,0,1.19967589418468,0,0,0,0.239624855491583,0,0,1.73737568001095,2.05476322550383,4.65558504423729,13.6743875672103,1.57624608161542,2.58753089831421,1.66845947163673,9.90969034467607,2.60279707715243,3.86644406388848,4.02039036802437,3.82763250991898,3.74503511973591,5.9832291840805,0.828831026872071,0.736148950314839,2.00068208423871,0.542530047399471,0.207970861530807,1.07057393278297,0,1.171414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| ||
|short_description=p1@ORC1 | |||
}} | }} |
Latest revision as of 12:44, 18 September 2015
Short description: | p1@ORC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ORC1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | -4bp_to_ENST00000371566_5end |
EntrezGene: | ORC1 |
HGNC: | 8487 |
UniProt: | Q13415 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.97e-17 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.96e-49 | 235 |
disease of cellular proliferation | 2.93e-47 | 239 |
hematologic cancer | 6.06e-27 | 51 |
immune system cancer | 6.06e-27 | 51 |
organ system cancer | 3.90e-24 | 137 |
cell type cancer | 5.69e-23 | 143 |
leukemia | 5.95e-23 | 39 |
carcinoma | 1.10e-20 | 106 |
myeloid leukemia | 9.12e-19 | 31 |