FFCP PHASE1:Hg19::chr1:53527864..53527891,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:53527864..53527891,+
|short_description=p1@PODN
|description=CAGE_peak_1_at_PODN_5end
|association_with_transcript=0bp_to_ENST00000312553,NM_001199081,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=127435 | |EntrezGene=127435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23174 | |HGNC=23174 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z5L7 | |UniProt=Q7Z5L7 | ||
|association_with_transcript=0bp_to_ENST00000312553,NM_001199081,uc001cuv.2,uc001cuw.2,uc010onr.1,uc010ons.1_5end | |||
|cluster_id=chr1:53527864..53527891,+ | |||
|description=CAGE_peak_1_at_PODN_5end | |||
|id=chr1:53527864..53527891,+ | |||
|ontology_enrichment_celltype=CL:0000055!6.13e-15!180;CL:0000057!7.30e-13!75;CL:0000187!1.98e-09!54;CL:0000136!2.61e-09!15;CL:0000192!2.90e-09!42;CL:0000514!2.90e-09!42;CL:0000680!5.69e-09!57;CL:0000056!5.69e-09!57;CL:0000355!5.69e-09!57;CL:0000183!1.01e-08!59;CL:0000393!1.81e-07!60;CL:0000211!1.81e-07!60;CL:0000359!9.07e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.29e-09;13!CL:0000192;2.75e-08;43!CL:0000359;2.67e-07;32!CL:0002334;8.28e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.44e-14,76;CL:0000192,6.36e-11,43;CL:0000514,6.36e-11,43;CL:0000136,2.41e-10,15;CL:0000187,2.67e-09,55;CL:0000680,1.35e-08,58;CL:0000056,1.35e-08,58;CL:0000355,1.35e-08,58;CL:0000359,1.43e-07,32;CL:0000393,4.17e-07,61;CL:0000211,4.17e-07,61;CL:0002334,7.64e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;2.75e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.34e-28!115;UBERON:0002385!2.87e-11!63;UBERON:0001015!2.87e-11!63;UBERON:0000383!2.87e-11!63;UBERON:0000475!3.70e-11!365;UBERON:0001134!2.13e-10!61;UBERON:0002036!2.13e-10!61;UBERON:0003082!2.13e-10!61;UBERON:0007100!1.55e-09!27;UBERON:0004872!2.78e-09!84;UBERON:0000948!2.21e-08!24;UBERON:0005498!2.21e-08!24;UBERON:0004140!2.21e-08!24;UBERON:0009881!2.21e-08!24;UBERON:0004141!2.21e-08!24;UBERON:0003084!2.21e-08!24;UBERON:0007005!2.21e-08!24;UBERON:0004139!2.21e-08!24;UBERON:0004291!2.21e-08!24;UBERON:0000477!2.67e-08!286;UBERON:0004290!2.97e-08!70;UBERON:0000481!8.55e-08!347;UBERON:0000914!1.21e-07!83;UBERON:0002329!1.21e-07!83;UBERON:0003077!1.21e-07!83;UBERON:0003059!1.21e-07!83;UBERON:0007282!1.21e-07!83;UBERON:0009618!1.21e-07!83;UBERON:0007285!1.21e-07!83;UBERON:0001009!1.27e-07!113;UBERON:0004111!1.74e-07!241;UBERON:0000468!3.16e-07!659;UBERON:0000025!4.12e-07!194;UBERON:0003075!4.53e-07!86;UBERON:0007284!4.53e-07!86;UBERON:0000483!5.50e-07!309;UBERON:0004535!7.17e-07!110;UBERON:0001637!8.61e-07!42;UBERON:0003509!8.61e-07!42;UBERON:0004572!8.61e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.24e-10;25!UBERON:0000948;6.55e-09;22!UBERON:0007023;8.98e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.82e-30,114;UBERON:0002385,4.69e-11,64;UBERON:0001015,4.69e-11,64;UBERON:0000383,4.69e-11,64;UBERON:0007100,1.34e-10,27;UBERON:0001134,4.03e-10,62;UBERON:0002036,4.03e-10,62;UBERON:0003082,4.03e-10,62;UBERON:0000948,2.72e-09,24;UBERON:0005498,2.72e-09,24;UBERON:0004140,2.72e-09,24;UBERON:0009881,2.72e-09,24;UBERON:0004141,2.72e-09,24;UBERON:0003084,2.72e-09,24;UBERON:0007005,2.72e-09,24;UBERON:0004139,2.72e-09,24;UBERON:0004291,2.72e-09,24;UBERON:0004111,3.35e-08,240;UBERON:0004872,3.56e-08,83;UBERON:0000479,5.82e-08,773;UBERON:0007524,8.82e-08,73;UBERON:0010314,1.20e-07,132;UBERON:0003077,1.45e-07,72;UBERON:0007285,1.45e-07,72;UBERON:0002329,1.69e-07,71;UBERON:0003059,1.69e-07,71;UBERON:0007282,1.69e-07,71;UBERON:0004290,1.69e-07,71;UBERON:0009618,1.69e-07,71;UBERON:0000025,7.62e-07,192;UBERON:0005256,8.44e-07,122 | |||
|phase1_expression=135.532070935835,128.032113286808,149.552622745825,136.099685760257,112.634195795677,119.510377801751,27.8629865985142,24.0053551902196,41.5285148837743,0,0,0,0,0.123766352960047,0.994192127183747,5.3786011716142,6.02694528023977,13.1455816269727,8.78279037822912,0.369363174230364,0.408001382488506,4.38836610069323,0,0.136874425072884,0,0,0,0,0.393364276848904,1.91914699048606,1.23852898652861,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44859552370032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0.318565414324097,1.30216690771284,0,1.05402583354441,1.02389288923535,0,0.236777252044017,1.64225599384209,1.61285394579786,1.33720097891754,1.30341963494519,43.8852359365131,1.34140171940727,6.13740296848946,27.8308147336116,14.0374614978049,19.9888196165937,0,17.0322204605923,0.189069634328136,0,1.05401742831751,32.0898734969396,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.549605231791222,0,0,0,32.3031768601957,10.1304409331664,115.063578126687,207.669713422141,28.0188021936702,35.8833664091077,1.06748995729705,2.22000793575444,20.5399283363846,8.21735099625097,2.7788523529288,2.8757911252537,1.72852777344,3.51482147750695,0.624320153660641,0.570471821544449,0,0,0.323745888736263,0,0.204154171254893,0,0,19.0080457165129,18.5450196958918,1.82032272387605,2.15585442544872,0.505008341862199,0.125118519871964,0,3.5118209670467,15.63087758575,33.5030871361711,1.70148274740032,26.011497174885,112.971858685022,27.9750109530622,53.1161240069392,45.8583755111053,27.0522567047911,35.1760858466705,11.3080142601648,5.16416127354353,21.7093045849938,81.9244097916464,94.2396511253673,32.3058729190119,18.9413944667964,17.6343016002907,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,4.5026865673502,0,4.64367928031979,9.38443326170461,0,0,0,0,0,0,0,0,0,0,4.20725321410337,16.0513864419246,19.1111324801205,0,0,6.49868897349544,0,0.245976877086227,0.686271241194102,0,0,0,0,1.3032332212413,4.15973914111831,0,1.15930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,1.29707958075265,1.64115163454294,0.063497894292169,0,0,3.4214489204541,0,0,0,0,0.87192013766656,0,7.23921608243556,3.57656445851882,0,14.6265964121679,4.16029747645464,0,0,0,72.2038867973645,6.51145926469732,0.823240336780769,0.325736184293735,65.747510517371,0.791951872933429,0.904318131178758,4.35766729300147,0.99972991182057,0,0,0,3.59437283237374,3.44585807502342,0,2.17171960001369,0,0.537182889719687,0,2.36436912242313,1.94064817373566,4.10697716095195,0.76228387266739,0,0,0.502548796003046,0,0,0,0,1.2269149171914,0.500170521059677,0.271265023699736,25.5804159682893,9.63516539504674,12.6161932027148,14.6426768740891,19.260550382574,77.3185513790349,69.3269577659783,0,1.29058417979192,43.0942727761691,2.54541504701563,4.46086450954113,0.82707210449155,1.07857100409308,0.426910231213777,0,0,0.907170879989041,51.110208410668,105.735299595475,92.3371710684812,104.561545792652,120.251203530675,39.8917724436147,87.5666592025447,2.31314540703983,6.39222211127257,5.99528238900807,5.71179872101983,1.74315567689939,0,0,0,58.7849974602787,9.10455840033585,20.8487819785484,0,0,0,0,0,0,0,0,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,24.2146377372147,0,0,0,0,99.6240365033789,2.80345083047154,0.154048617114644,0.614014698904518,0.689182862422653,0.751941714077915,1.45016693914229,0.596586391912706,9.5264278142009,0,0,0,0.10115778085555,1.85938219718914,36.8330445791849,2.7881490806424,25.2587535744393,3.19383618190213,6.08953094452551,1.11194531462352,2.14687330112987,1.86079184679834,6.01120906965579,47.84817867488,4.86205803491534,41.5100818392903,8.27328444607436,3.92474320099615,5.93579110024939,7.41249980287348,2.82749765629647,4.04364963146632,3.17020642346017,2.94880919367287,6.33923860816467,6.82397770967596,3.16950440270266,21.5669860024617,121.467266048239,22.6016233240486,7.16774946609961,11.2784625791007,5.69986150829892,1.73632660280006,13.7737897929793,1.82619339266434,3.40805847909725,2.53526042279017,0,1.17898849215745,3.5667105148125,6.03093808920016,94.7873282486512,267.38745308344,16.3173464719257,8.04849856563461,0,0,0,22.0296493817663,0,0,0,0,0,0.764637207142375,1.13929437434833,0.476463550915578,0.411362273086194,1.29694662238543,0,2.37937552888281,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.180986162612,0,0,0,0,0,0,1.9882952955326,5.76744607283102,0.779160935160341,0,0,102.014969984548,48.3496852179508,0,0.20453736500431,0,181.647119194496,0,0,0,147.175961210305,0,0,0.969332746095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| |phase1_expression=135.532070935835,128.032113286808,149.552622745825,136.099685760257,112.634195795677,119.510377801751,27.8629865985142,24.0053551902196,41.5285148837743,0,0,0,0,0.123766352960047,0.994192127183747,5.3786011716142,6.02694528023977,13.1455816269727,8.78279037822912,0.369363174230364,0.408001382488506,4.38836610069323,0,0.136874425072884,0,0,0,0,0.393364276848904,1.91914699048606,1.23852898652861,0,0,0,0,0,0,1.10799081706375,0.401088894940283,0.434021741431704,0,0.32389366601898,0,0,0,0,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44859552370032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0.226618685395132,0,0,0.253019692019503,0.318565414324097,1.30216690771284,0,1.05402583354441,1.02389288923535,0,0.236777252044017,1.64225599384209,1.61285394579786,1.33720097891754,1.30341963494519,43.8852359365131,1.34140171940727,6.13740296848946,27.8308147336116,14.0374614978049,19.9888196165937,0,17.0322204605923,0.189069634328136,0,1.05401742831751,32.0898734969396,0,0,0,0,0.132957960518865,0,0,0,0,0,0.347140501607594,0.56530794192401,0.419499436209906,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0.81014194788176,0.267899184852239,0,0.112611480483322,0,0,0.549605231791222,0,0,0,32.3031768601957,10.1304409331664,115.063578126687,207.669713422141,28.0188021936702,35.8833664091077,1.06748995729705,2.22000793575444,20.5399283363846,8.21735099625097,2.7788523529288,2.8757911252537,1.72852777344,3.51482147750695,0.624320153660641,0.570471821544449,0,0,0.323745888736263,0,0.204154171254893,0,0,19.0080457165129,18.5450196958918,1.82032272387605,2.15585442544872,0.505008341862199,0.125118519871964,0,3.5118209670467,15.63087758575,33.5030871361711,1.70148274740032,26.011497174885,112.971858685022,27.9750109530622,53.1161240069392,45.8583755111053,27.0522567047911,35.1760858466705,11.3080142601648,5.16416127354353,21.7093045849938,81.9244097916464,94.2396511253673,32.3058729190119,18.9413944667964,17.6343016002907,0,0,0,0.121973706129595,0,0.348581828608555,0.10366105501537,0.252320850875628,0,0,4.5026865673502,0,4.64367928031979,9.38443326170461,0,0,0,0,0,0,0,0,0,0,4.20725321410337,16.0513864419246,19.1111324801205,0,0,6.49868897349544,0,0.245976877086227,0.686271241194102,0,0,0,0,1.3032332212413,4.15973914111831,0,1.15930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,1.29707958075265,1.64115163454294,0.063497894292169,0,0,3.4214489204541,0,0,0,0,0.87192013766656,0,7.23921608243556,3.57656445851882,0,14.6265964121679,4.16029747645464,0,0,0,72.2038867973645,6.51145926469732,0.823240336780769,0.325736184293735,65.747510517371,0.791951872933429,0.904318131178758,4.35766729300147,0.99972991182057,0,0,0,3.59437283237374,3.44585807502342,0,2.17171960001369,0,0.537182889719687,0,2.36436912242313,1.94064817373566,4.10697716095195,0.76228387266739,0,0,0.502548796003046,0,0,0,0,1.2269149171914,0.500170521059677,0.271265023699736,25.5804159682893,9.63516539504674,12.6161932027148,14.6426768740891,19.260550382574,77.3185513790349,69.3269577659783,0,1.29058417979192,43.0942727761691,2.54541504701563,4.46086450954113,0.82707210449155,1.07857100409308,0.426910231213777,0,0,0.907170879989041,51.110208410668,105.735299595475,92.3371710684812,104.561545792652,120.251203530675,39.8917724436147,87.5666592025447,2.31314540703983,6.39222211127257,5.99528238900807,5.71179872101983,1.74315567689939,0,0,0,58.7849974602787,9.10455840033585,20.8487819785484,0,0,0,0,0,0,0,0,4.62681758070868,0,0.501689773854853,0,0,0,0,0,0.256450125116389,0.656029291399411,0.325378394664303,24.2146377372147,0,0,0,0,99.6240365033789,2.80345083047154,0.154048617114644,0.614014698904518,0.689182862422653,0.751941714077915,1.45016693914229,0.596586391912706,9.5264278142009,0,0,0,0.10115778085555,1.85938219718914,36.8330445791849,2.7881490806424,25.2587535744393,3.19383618190213,6.08953094452551,1.11194531462352,2.14687330112987,1.86079184679834,6.01120906965579,47.84817867488,4.86205803491534,41.5100818392903,8.27328444607436,3.92474320099615,5.93579110024939,7.41249980287348,2.82749765629647,4.04364963146632,3.17020642346017,2.94880919367287,6.33923860816467,6.82397770967596,3.16950440270266,21.5669860024617,121.467266048239,22.6016233240486,7.16774946609961,11.2784625791007,5.69986150829892,1.73632660280006,13.7737897929793,1.82619339266434,3.40805847909725,2.53526042279017,0,1.17898849215745,3.5667105148125,6.03093808920016,94.7873282486512,267.38745308344,16.3173464719257,8.04849856563461,0,0,0,22.0296493817663,0,0,0,0,0,0.764637207142375,1.13929437434833,0.476463550915578,0.411362273086194,1.29694662238543,0,2.37937552888281,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.180986162612,0,0,0,0,0,0,1.9882952955326,5.76744607283102,0.779160935160341,0,0,102.014969984548,48.3496852179508,0,0.20453736500431,0,181.647119194496,0,0,0,147.175961210305,0,0,0.969332746095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| ||
|short_description=p1@PODN | |||
}} | }} |
Latest revision as of 13:26, 18 September 2015
Short description: | p1@PODN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PODN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000312553, NM_001199081, uc001cuv.2, uc001cuw.2, uc010onr.1, uc010ons.1_5end |
EntrezGene: | PODN |
HGNC: | 23174 |
UniProt: | Q7Z5L7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.44e-14 | 76 |
smooth muscle cell | 6.36e-11 | 43 |
smooth muscle myoblast | 6.36e-11 | 43 |
fat cell | 2.41e-10 | 15 |
muscle cell | 2.67e-09 | 55 |
muscle precursor cell | 1.35e-08 | 58 |
myoblast | 1.35e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.35e-08 | 58 |
vascular associated smooth muscle cell | 1.43e-07 | 32 |
electrically responsive cell | 4.17e-07 | 61 |
electrically active cell | 4.17e-07 | 61 |
preadipocyte | 7.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.82e-30 | 114 |
muscle tissue | 4.69e-11 | 64 |
musculature | 4.69e-11 | 64 |
musculature of body | 4.69e-11 | 64 |
primary circulatory organ | 1.34e-10 | 27 |
skeletal muscle tissue | 4.03e-10 | 62 |
striated muscle tissue | 4.03e-10 | 62 |
myotome | 4.03e-10 | 62 |
heart | 2.72e-09 | 24 |
primitive heart tube | 2.72e-09 | 24 |
primary heart field | 2.72e-09 | 24 |
anterior lateral plate mesoderm | 2.72e-09 | 24 |
heart tube | 2.72e-09 | 24 |
heart primordium | 2.72e-09 | 24 |
cardiac mesoderm | 2.72e-09 | 24 |
cardiogenic plate | 2.72e-09 | 24 |
heart rudiment | 2.72e-09 | 24 |
anatomical conduit | 3.35e-08 | 240 |
splanchnic layer of lateral plate mesoderm | 3.56e-08 | 83 |
tissue | 5.82e-08 | 773 |
dense mesenchyme tissue | 8.82e-08 | 73 |
structure with developmental contribution from neural crest | 1.20e-07 | 132 |
paraxial mesoderm | 1.45e-07 | 72 |
presumptive paraxial mesoderm | 1.45e-07 | 72 |
somite | 1.69e-07 | 71 |
presomitic mesoderm | 1.69e-07 | 71 |
presumptive segmental plate | 1.69e-07 | 71 |
dermomyotome | 1.69e-07 | 71 |
trunk paraxial mesoderm | 1.69e-07 | 71 |
tube | 7.62e-07 | 192 |
trunk mesenchyme | 8.44e-07 | 122 |