FFCP PHASE1:Hg19::chr8:32579321..32579340,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3084 | |EntrezGene=3084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7997 | |HGNC=7997 | ||
|TSSclassifier=strong | |||
|UniProt=E5RHP6 | |UniProt=E5RHP6 | ||
|association_with_transcript=0bp_to_ENST00000522402_5end | |association_with_transcript=0bp_to_ENST00000522402_5end | ||
|cluster_id=chr8:32579321..32579340,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_10_at_NRG1_5end | |description=CAGE_peak_10_at_NRG1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!5.33e-19!180;CL:0000057!1.16e-17!75;CL:0002334!5.88e-11!12;CL:0002620!1.49e-09!23;CL:1000306!8.64e-08!4;CL:0002547!8.64e-08!4;CL:0000359!4.61e-07!32;CL:0002580!9.97e-07!3 | |ontology_enrichment_celltype=CL:0000055!5.33e-19!180;CL:0000057!1.16e-17!75;CL:0002334!5.88e-11!12;CL:0002620!1.49e-09!23;CL:1000306!8.64e-08!4;CL:0002547!8.64e-08!4;CL:0000359!4.61e-07!32;CL:0002580!9.97e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.43e-12;23!CL:0000319;4.27e-08;1!CL:0000228;1.04e-07;1!CL:0002372;1.04e-07;1 | |ontology_enrichment_celltype_v019=CL:0002620;1.43e-12;23!CL:0000319;4.27e-08;1!CL:0000228;1.04e-07;1!CL:0002372;1.04e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.65e-12,23;CL:0000319,4.28e-08,1;CL:0000057,5.48e-08,76;CL:0000228,8.28e-08,1;CL:0002372,8.28e-08,1 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060084!6.79e-07!3;DOID:127!6.79e-07!3 | |ontology_enrichment_disease=DOID:0060084!6.79e-07!3;DOID:127!6.79e-07!3 | ||
|ontology_enrichment_disease_v019=DOID:0060084;2.99e-09;3!DOID:127;2.99e-09;3!DOID:3030;4.27e-08;1!DOID:6193;2.10e-07;1!DOID:0060072;3.83e-07;4 | |ontology_enrichment_disease_v019=DOID:0060084;2.99e-09;3!DOID:127;2.99e-09;3!DOID:3030;4.27e-08;1!DOID:6193;2.10e-07;1!DOID:0060072;3.83e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.33e-09,3;DOID:127,2.33e-09,3;DOID:3030,4.28e-08,1;DOID:6193,1.48e-07,1;DOID:0060072,3.18e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0004573!6.37e-08!33;UBERON:0004571!6.37e-08!33;UBERON:0003076!7.65e-08!15;UBERON:0003057!7.65e-08!15;UBERON:0000415!8.64e-08!4;UBERON:0007240!8.64e-08!4;UBERON:0005742!8.64e-08!4;UBERON:0005734!8.64e-08!4;UBERON:0004664!8.64e-08!4;UBERON:0004663!8.64e-08!4 | |ontology_enrichment_uberon=UBERON:0001637!1.12e-08!42;UBERON:0003509!1.12e-08!42;UBERON:0004572!1.12e-08!42;UBERON:0004573!6.37e-08!33;UBERON:0004571!6.37e-08!33;UBERON:0003076!7.65e-08!15;UBERON:0003057!7.65e-08!15;UBERON:0000415!8.64e-08!4;UBERON:0007240!8.64e-08!4;UBERON:0005742!8.64e-08!4;UBERON:0005734!8.64e-08!4;UBERON:0004664!8.64e-08!4;UBERON:0004663!8.64e-08!4 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p10@NRG1 | |short_description=p10@NRG1 | ||
}} | }} |
Latest revision as of 00:44, 18 September 2015
Short description: | p10@NRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NRG1_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | 0bp_to_ENST00000522402_5end |
EntrezGene: | NRG1 |
HGNC: | 7997 |
UniProt: | E5RHP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.65e-12 | 23 |
mucus secreting cell | 4.28e-08 | 1 |
fibroblast | 5.48e-08 | 76 |
multinucleate cell | 8.28e-08 | 1 |
myotube | 8.28e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.33e-09 | 3 |
leiomyoma | 2.33e-09 | 3 |
mucinous adenocarcinoma | 4.28e-08 | 1 |
epithelioid sarcoma | 1.48e-07 | 1 |
benign neoplasm | 3.18e-07 | 4 |