FFCP PHASE1:Hg19::chr1:11919679..11919705,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:11919679..11919705,- | |||
|description=CAGE_peak_at_chr1:11919679..11919705,- | |description=CAGE_peak_at_chr1:11919679..11919705,- | ||
|id=chr1:11919679..11919705,- | |id=chr1:11919679..11919705,- | ||
|ontology_enrichment_celltype=CL:0000077!4.87e-37!19;CL:0000039!2.75e-13!7;CL:0000586!2.75e-13!7;CL:0000222!2.20e-10!119;CL:0000213!3.79e-10!57;CL:0000215!3.79e-10!57;CL:0000076!4.45e-09!62;CL:0000220!3.89e-08!246;CL:0002321!5.16e-08!248 | |ontology_enrichment_celltype=CL:0000077!4.87e-37!19;CL:0000039!2.75e-13!7;CL:0000586!2.75e-13!7;CL:0000222!2.20e-10!119;CL:0000213!3.79e-10!57;CL:0000215!3.79e-10!57;CL:0000076!4.45e-09!62;CL:0000220!3.89e-08!246;CL:0002321!5.16e-08!248 | ||
|ontology_enrichment_celltype_v019=CL:0002591;5.92e-26;1!CL:0000077;2.58e-21;19!CL:0002097;1.07e-13;2!CL:0000174;1.41e-09;3 | |ontology_enrichment_celltype_v019=CL:0002591;5.92e-26;1!CL:0000077;2.58e-21;19!CL:0002097;1.07e-13;2!CL:0000174;1.41e-09;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.62e-26,1;CL:0000077,1.88e-21,19;CL:0002097,8.28e-14,2;CL:0000174,1.19e-09,3;CL:0000222,1.80e-07,121;CL:0000213,2.54e-07,58;CL:0000215,2.54e-07,58;CL:0000076,9.11e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0004140;5.92e-26;1 | |ontology_enrichment_development_v019=UBERON:0004140;5.92e-26;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;1.07e-13;2!UBERON:0002012;1.07e-13;2!UBERON:0008886;1.07e-13;2!UBERON:0002369;1.41e-09;3!UBERON:0001235;1.41e-09;3!UBERON:0006858;1.41e-09;3 | |ontology_enrichment_uberon_v019=UBERON:0000078;1.07e-13;2!UBERON:0002012;1.07e-13;2!UBERON:0008886;1.07e-13;2!UBERON:0002369;1.41e-09;3!UBERON:0001235;1.41e-09;3!UBERON:0006858;1.41e-09;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.21e-13,2;UBERON:0007497,1.21e-13,2;UBERON:0003643,1.21e-13,2;UBERON:0003504,1.21e-13,2;UBERON:0003469,1.21e-13,2;UBERON:0003496,1.21e-13,2;UBERON:0002012,1.21e-13,2;UBERON:0008886,1.21e-13,2;UBERON:0007303,1.21e-13,2;UBERON:0002061,1.21e-13,2;UBERON:0005432,1.21e-13,2;UBERON:0004363,1.21e-13,2;UBERON:0002369,1.19e-09,3;UBERON:0001235,1.19e-09,3;UBERON:0006858,1.19e-09,3;UBERON:0004145,1.54e-09,3 | |||
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| ||
|short_description=p@chr1:11919679..11919705,- | |short_description=p@chr1:11919679..11919705,- | ||
}} | }} |
Latest revision as of 20:16, 27 July 2015
Short description: | p@chr1:11919679..11919705, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:11919679..11919705, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.62e-26 | 1 |
mesothelial cell | 1.88e-21 | 19 |
cortical cell of adrenal gland | 8.28e-14 | 2 |
steroid hormone secreting cell | 1.19e-09 | 3 |
mesodermal cell | 1.80e-07 | 121 |
lining cell | 2.54e-07 | 58 |
barrier cell | 2.54e-07 | 58 |
squamous epithelial cell | 9.11e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.21e-13 | 2 |
developing epithelial placode | 1.21e-13 | 2 |
respiratory system arterial blood vessel | 1.21e-13 | 2 |
respiratory system blood vessel | 1.21e-13 | 2 |
respiratory system artery | 1.21e-13 | 2 |
head blood vessel | 1.21e-13 | 2 |
pulmonary artery | 1.21e-13 | 2 |
pulmonary vascular system | 1.21e-13 | 2 |
pharyngeal vasculature | 1.21e-13 | 2 |
truncus arteriosus | 1.21e-13 | 2 |
aortic sac | 1.21e-13 | 2 |
pharyngeal arch artery | 1.21e-13 | 2 |
adrenal gland | 1.19e-09 | 3 |
adrenal cortex | 1.19e-09 | 3 |
adrenal/interrenal gland | 1.19e-09 | 3 |
outflow tract | 1.54e-09 | 3 |