FFCP PHASE1:Hg19::chr13:34727644..34727660,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:34727644..34727660,- | |||
|description=CAGE_peak_at_chr13:34727644..34727660,- | |description=CAGE_peak_at_chr13:34727644..34727660,- | ||
|id=chr13:34727644..34727660,- | |id=chr13:34727644..34727660,- | ||
|ontology_enrichment_celltype=CL:0000077!1.57e-34!19;CL:0000213!8.05e-24!57;CL:0000215!8.05e-24!57;CL:0000076!9.19e-24!62;CL:0000066!7.77e-13!254;CL:0000222!2.10e-12!119;CL:0000220!2.19e-12!246;CL:0002321!3.21e-12!248;CL:0002543!9.57e-11!6;CL:0000071!7.65e-10!18;CL:0002546!7.65e-10!18;CL:0002139!3.89e-07!24 | |ontology_enrichment_celltype=CL:0000077!1.57e-34!19;CL:0000213!8.05e-24!57;CL:0000215!8.05e-24!57;CL:0000076!9.19e-24!62;CL:0000066!7.77e-13!254;CL:0000222!2.10e-12!119;CL:0000220!2.19e-12!246;CL:0002321!3.21e-12!248;CL:0002543!9.57e-11!6;CL:0000071!7.65e-10!18;CL:0002546!7.65e-10!18;CL:0002139!3.89e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.77e-69;19!CL:0000076;3.11e-11;63!CL:0000213;8.15e-11;58!CL:0000215;8.15e-11;58!CL:0002097;9.46e-10;2!CL:0000174;6.50e-07;3!CL:0002586;8.62e-07;3 | |ontology_enrichment_celltype_v019=CL:0000077;1.77e-69;19!CL:0000076;3.11e-11;63!CL:0000213;8.15e-11;58!CL:0000215;8.15e-11;58!CL:0002097;9.46e-10;2!CL:0000174;6.50e-07;3!CL:0002586;8.62e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.92e-69,19;CL:0000213,1.02e-27,58;CL:0000215,1.02e-27,58;CL:0000076,1.81e-25,63;CL:0000222,6.60e-13,121;CL:0002097,9.46e-10,2;CL:0000066,5.12e-07,253;CL:0000174,6.50e-07,3;CL:0002586,7.70e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000487!2.92e-10!22;UBERON:0001986!7.65e-10!18;UBERON:0004638!7.65e-10!18;UBERON:0004852!7.65e-10!18;UBERON:0006914!7.16e-09!25;UBERON:0001638!3.56e-07!9;UBERON:0003920!3.56e-07!9;UBERON:0004582!3.56e-07!9 | |ontology_enrichment_uberon=UBERON:0000487!2.92e-10!22;UBERON:0001986!7.65e-10!18;UBERON:0004638!7.65e-10!18;UBERON:0004852!7.65e-10!18;UBERON:0006914!7.16e-09!25;UBERON:0001638!3.56e-07!9;UBERON:0003920!3.56e-07!9;UBERON:0004582!3.56e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002369;6.50e-07;3!UBERON:0001235;6.50e-07;3!UBERON:0006858;6.50e-07;3!UBERON:0001781;8.62e-07;3!UBERON:0001782;8.62e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002369;6.50e-07;3!UBERON:0001235;6.50e-07;3!UBERON:0006858;6.50e-07;3!UBERON:0001781;8.62e-07;3!UBERON:0001782;8.62e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.50e-07,3;UBERON:0001235,6.50e-07,3;UBERON:0006858,6.50e-07,3;UBERON:0001782,7.70e-07,3;UBERON:0005424,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64007322849853,0.976135183992909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,4.50327341887344,1.82696004375648,1.36023555307363,0.463044948647668,0,1.07453304648892,1.85280868296583,5.92066933862509,0,0.38582807654183,5.23721566024525,0,1.0362910251936,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.626984899610432,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0,0,0,1.12135520028461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,1.19967589418468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64007322849853,0.976135183992909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.543616824294456,0.418411385249333,0,0,0,0,0,0.429765441419957,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,4.50327341887344,1.82696004375648,1.36023555307363,0.463044948647668,0,1.07453304648892,1.85280868296583,5.92066933862509,0,0.38582807654183,5.23721566024525,0,1.0362910251936,0,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:34727644..34727660,- | |short_description=p@chr13:34727644..34727660,- | ||
}} | }} |
Latest revision as of 15:44, 24 July 2015
Short description: | p@chr13:34727644..34727660, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:34727644..34727660, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.92e-69 | 19 |
lining cell | 1.02e-27 | 58 |
barrier cell | 1.02e-27 | 58 |
squamous epithelial cell | 1.81e-25 | 63 |
mesodermal cell | 6.60e-13 | 121 |
cortical cell of adrenal gland | 9.46e-10 | 2 |
epithelial cell | 5.12e-07 | 253 |
steroid hormone secreting cell | 6.50e-07 | 3 |
retinal pigment epithelial cell | 7.70e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 6.50e-07 | 3 |
adrenal cortex | 6.50e-07 | 3 |
adrenal/interrenal gland | 6.50e-07 | 3 |
pigmented layer of retina | 7.70e-07 | 3 |
presumptive retinal pigmented epithelium | 7.70e-07 | 3 |