FFCP PHASE1:Hg19::chr10:33218850..33218867,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33218850..33218867,+ | |||
|description=CAGE_peak_at_chr10:33218850..33218867,+ | |description=CAGE_peak_at_chr10:33218850..33218867,+ | ||
|id=chr10:33218850..33218867,+ | |id=chr10:33218850..33218867,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.87e-17!180;CL:0000057!1.41e-10!75;CL:0000548!8.27e-09!679;CL:0000004!8.27e-09!679;CL:0000255!8.27e-09!679;CL:0000393!1.99e-08!60;CL:0000211!1.99e-08!60;CL:0000012!2.70e-08!682;CL:0002371!3.47e-08!591;CL:0000680!5.80e-08!57;CL:0000056!5.80e-08!57;CL:0000355!5.80e-08!57;CL:0000220!9.78e-08!246;CL:0000187!1.14e-07!54;CL:0002321!2.28e-07!248;CL:0000144!2.67e-07!625 | |ontology_enrichment_celltype=CL:0000055!2.87e-17!180;CL:0000057!1.41e-10!75;CL:0000548!8.27e-09!679;CL:0000004!8.27e-09!679;CL:0000255!8.27e-09!679;CL:0000393!1.99e-08!60;CL:0000211!1.99e-08!60;CL:0000012!2.70e-08!682;CL:0002371!3.47e-08!591;CL:0000680!5.80e-08!57;CL:0000056!5.80e-08!57;CL:0000355!5.80e-08!57;CL:0000220!9.78e-08!246;CL:0000187!1.14e-07!54;CL:0002321!2.28e-07!248;CL:0000144!2.67e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.05e-08;55!CL:0002595;1.96e-08;5!CL:0002620;2.06e-08;23!CL:0000048;2.19e-07;58!CL:0002334;3.55e-07;12!CL:0000723;7.37e-07;61 | |ontology_enrichment_celltype_v019=CL:0000134;1.05e-08;55!CL:0002595;1.96e-08;5!CL:0002620;2.06e-08;23!CL:0000048;2.19e-07;58!CL:0002334;3.55e-07;12!CL:0000723;7.37e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.05e-13,76;CL:0000048,9.05e-11,427;CL:0000723,2.74e-10,433;CL:0000034,1.14e-09,441;CL:0000680,2.36e-09,58;CL:0000056,2.36e-09,58;CL:0000355,2.36e-09,58;CL:0002620,1.98e-08,23;CL:0002595,1.99e-08,5;CL:0000187,2.36e-08,55;CL:0000393,9.23e-08,61;CL:0000211,9.23e-08,61;CL:0000359,6.44e-07,32;CL:0002334,7.54e-07,12;CL:0000192,7.58e-07,43;CL:0000514,7.58e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.43e-11;14 | |ontology_enrichment_disease_v019=DOID:2394;3.43e-11;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,1.34e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.57e-08!83;UBERON:0002329!1.57e-08!83;UBERON:0003077!1.57e-08!83;UBERON:0003059!1.57e-08!83;UBERON:0007282!1.57e-08!83;UBERON:0009618!1.57e-08!83;UBERON:0007285!1.57e-08!83;UBERON:0000486!1.25e-07!82;UBERON:0001134!1.25e-07!61;UBERON:0002036!1.25e-07!61;UBERON:0003082!1.25e-07!61;UBERON:0004290!1.42e-07!70;UBERON:0002385!1.54e-07!63;UBERON:0001015!1.54e-07!63;UBERON:0000383!1.54e-07!63 | |ontology_enrichment_uberon=UBERON:0000914!1.57e-08!83;UBERON:0002329!1.57e-08!83;UBERON:0003077!1.57e-08!83;UBERON:0003059!1.57e-08!83;UBERON:0007282!1.57e-08!83;UBERON:0009618!1.57e-08!83;UBERON:0007285!1.57e-08!83;UBERON:0000486!1.25e-07!82;UBERON:0001134!1.25e-07!61;UBERON:0002036!1.25e-07!61;UBERON:0003082!1.25e-07!61;UBERON:0004290!1.42e-07!70;UBERON:0002385!1.54e-07!63;UBERON:0001015!1.54e-07!63;UBERON:0000383!1.54e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.73e-08;33!UBERON:0004571;1.73e-08;33!UBERON:0003834;1.96e-08;5!UBERON:0001533;1.96e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0004573;1.73e-08;33!UBERON:0004571;1.73e-08;33!UBERON:0003834;1.96e-08;5!UBERON:0001533;1.96e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,6.46e-09,33;UBERON:0004571,6.46e-09,33;UBERON:0003834,1.99e-08,5;UBERON:0001533,1.99e-08,5;UBERON:0007524,1.99e-08,73;UBERON:0001134,2.42e-08,62;UBERON:0002036,2.42e-08,62;UBERON:0003082,2.42e-08,62;UBERON:0000486,2.50e-08,83;UBERON:0002329,3.96e-08,71;UBERON:0003059,3.96e-08,71;UBERON:0007282,3.96e-08,71;UBERON:0004290,3.96e-08,71;UBERON:0009618,3.96e-08,71;UBERON:0001637,5.67e-08,42;UBERON:0003509,5.67e-08,42;UBERON:0004572,5.67e-08,42;UBERON:0003077,6.35e-08,72;UBERON:0007285,6.35e-08,72;UBERON:0002385,6.89e-08,64;UBERON:0001015,6.89e-08,64;UBERON:0000383,6.89e-08,64;UBERON:0004872,3.10e-07,83;UBERON:0007503,8.12e-07,78 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.281908808191942,10.007329835313,6.25745532198203,8.72338524100369,0,0,0,0,0,0,0.263766978228454,0.37129905888014,3.31397375727916,8.0679017574213,3.61616716814386,2.19093027116212,6.8310591830671,0,0.408001382488506,0,0.85870796139317,0.273748850145768,0.376627918784408,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0.895661896959697,0.647787332037959,0,0.581592955118259,0,0,0.464858073811369,0,0.619412741790207,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0.426224750532694,0.580418477257168,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0.390178042679635,0.164437904603676,0,0,0,0.267540828089713,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0,0,0.403213486449465,0,0.144824403882799,0,1.34140171940727,0.767175371061182,5.78302643815306,0,0.869079113764942,0,0.486634870302636,0.378139268656271,0.221729397462564,0.351339142772504,0.196468613246569,0,0.370784442784429,0.324547393654683,0.348259474598534,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,1.29208379584664,1.06729878806013,0,1.20848795132744,0,0.24406205754817,1.10298924103761,0,0.267899184852239,0.22452937262617,0.337834441449967,0,0,0.366403487860815,0,0,0,4.47274756525787,1.13967460498122,0.397227542439656,2.58152958673932,1.41867352879343,0,1.06748995729705,0.24666754841716,0.311211035399766,0.808264032418128,1.47115712802113,0.151357427644931,1.15235184896,0,0,0,0.747243402759005,0.939475989150119,1.78060238804945,0.421352420106746,0.61246251376468,1.10550885580591,0,2.37600571456411,0.989067717114227,0,0,0.673344455816265,0.375355559615893,0,0.877955241761676,1.22595118319608,0.300476117813194,1.58805056424029,2.33206526395521,0.213557388818567,0.635795703478686,5.70173082560364,1.44273540933814,1.54584324027377,0.18611685633159,1.68776332241266,0.876933046450788,1.00973509697646,1.38074847963449,1.13152239773168,3.19508633264953,1.30977727695932,1.01736355386293,1.93260853163297,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,1.92972281457866,0,0.928735856063958,1.44375896333917,0.473227200159376,0.337169380156203,0.241011029883482,0.110293972732394,0.435758888184812,0.237270619111097,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0.768251997860379,0,0.502644862058154,0.370353780634118,0,0,0,0,0.469634776943287,0.288732895522148,0,0.380508304469197,0,0,0,0.468008530278475,0.297262324577456,0,0.335964256397719,0.567100388969546,1.88072897675981,0.290633938513962,0,0,0,0,0.144119953416961,0.12624243342638,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0.112131084345361,0,0.22001485746285,2.71470603091333,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0,0.714889968290738,0,0,1.30294473717494,0,0,1.50719688529793,0,0.799783929456456,0,0,0,0.718874566474748,1.14861935834114,4.27910715122155,1.01346914667305,1.64381058040307,0,0,0.197030760201927,0.646882724578552,0.256686072559497,0.254094624222463,0,0.773288812777695,0,0.637938751653163,0,0,0,0.12269149171914,0.500170521059677,2.44138521329762,3.95144636908534,3.21172179834891,2.68094105557689,2.34282829985426,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.695068915744663,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0.744323423456331,1.07423381301644,4.49056151092918,1.92208723883551,0,0.804269605718038,1.48418066444991,0,1.06537035187876,1.06765302817952,1.03850885836724,4.99704627377825,0,1.40354529212299,0.460404944679482,1.14814448164607,0.910455840033585,0.262248829918848,0,0.847168708148562,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,4.82051789532479,0.773365746336976,1.07834031980251,1.68854042198743,1.10269257987624,0.644521469209642,0.580066775656914,0.170453254832202,0.0890320356467374,0.991709492165869,1.53752053892085,0.382838137483752,0.2023155617111,0,2.51849877464512,0,0,1.06461206063404,0,0.37064843820784,0.572499546967965,0.744316738719335,0.632758849437452,0.762520775695299,0,0.855877976067841,0.636406495851874,0.78494864019923,1.61885211824983,0.823611089208164,0.706874414074119,0.202182481573316,0,3.79132610615083,0,3.65570234446927,2.11300293513511,3.95849743083159,1.27264888758341,0,1.10273068709225,2.65375590096488,1.75380354101505,0,0,0.202910376962704,0,1.12678241012897,0.286822704408103,1.27723753317057,0,0.709522128141196,0.844430541190656,3.95153871551882,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,2.06751060186264,0,0,0,0,0,0.648473311192717,0.540031437238115,0,0.106824071127473,0,0.735120647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| ||
|short_description=p@chr10:33218850..33218867,+ | |short_description=p@chr10:33218850..33218867,+ | ||
}} | }} |
Latest revision as of 13:19, 23 July 2015
Short description: | p@chr10:33218850..33218867, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33218850..33218867, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.05e-13 | 76 |
multi fate stem cell | 9.05e-11 | 427 |
somatic stem cell | 2.74e-10 | 433 |
stem cell | 1.14e-09 | 441 |
muscle precursor cell | 2.36e-09 | 58 |
myoblast | 2.36e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.36e-09 | 58 |
skin fibroblast | 1.98e-08 | 23 |
smooth muscle cell of the subclavian artery | 1.99e-08 | 5 |
muscle cell | 2.36e-08 | 55 |
electrically responsive cell | 9.23e-08 | 61 |
electrically active cell | 9.23e-08 | 61 |
vascular associated smooth muscle cell | 6.44e-07 | 32 |
preadipocyte | 7.54e-07 | 12 |
smooth muscle cell | 7.58e-07 | 43 |
smooth muscle myoblast | 7.58e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 6.46e-09 | 33 |
systemic arterial system | 6.46e-09 | 33 |
thoracic segment blood vessel | 1.99e-08 | 5 |
subclavian artery | 1.99e-08 | 5 |
dense mesenchyme tissue | 1.99e-08 | 73 |
skeletal muscle tissue | 2.42e-08 | 62 |
striated muscle tissue | 2.42e-08 | 62 |
myotome | 2.42e-08 | 62 |
multilaminar epithelium | 2.50e-08 | 83 |
somite | 3.96e-08 | 71 |
presomitic mesoderm | 3.96e-08 | 71 |
presumptive segmental plate | 3.96e-08 | 71 |
dermomyotome | 3.96e-08 | 71 |
trunk paraxial mesoderm | 3.96e-08 | 71 |
artery | 5.67e-08 | 42 |
arterial blood vessel | 5.67e-08 | 42 |
arterial system | 5.67e-08 | 42 |
paraxial mesoderm | 6.35e-08 | 72 |
presumptive paraxial mesoderm | 6.35e-08 | 72 |
muscle tissue | 6.89e-08 | 64 |
musculature | 6.89e-08 | 64 |
musculature of body | 6.89e-08 | 64 |
splanchnic layer of lateral plate mesoderm | 3.10e-07 | 83 |
epithelial vesicle | 8.12e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.34e-11 | 14 |