FFCP PHASE1:Hg19::chr1:7887729..7887774,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:7887729..7887774,+
|short_description=p6@PER3
|description=CAGE_peak_6_at_PER3_5end
|association_with_transcript=0bp_to_AK299123_5end
|EntrezGene=8863
|H...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8863 | |EntrezGene=8863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8847 | |HGNC=8847 | ||
|TSSclassifier=strong | |||
|UniProt=B4DR65 | |UniProt=B4DR65 | ||
|association_with_transcript=0bp_to_AK299123_5end | |||
|cluster_id=chr1:7887729..7887774,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_6_at_PER3_5end | |||
|id=chr1:7887729..7887774,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;3.11e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.05e-11,168;CL:0000988,7.29e-11,177;CL:0002032,5.81e-10,161;CL:0000837,5.81e-10,161;CL:0000763,3.43e-09,108;CL:0000049,3.43e-09,108;CL:0000235,3.24e-08,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1240;6.03e-21;39!DOID:8692;2.98e-19;31!DOID:1036;3.50e-17;8!DOID:2531;1.88e-14;51!DOID:0060083;1.88e-14;51!DOID:74;1.58e-11;2!DOID:9119;4.85e-07;1!DOID:2355;9.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.18e-21,39;DOID:2531,8.47e-21,51;DOID:0060083,8.47e-21,51;DOID:8692,2.87e-19,31;DOID:1036,3.57e-17,8;DOID:74,1.00e-11,2;DOID:9119,4.85e-07,1;DOID:2355,9.48e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0,0.123766352960047,0,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0,0,0,0,0,0.659702600373432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0.570025487482497,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.411202997999018,0,0.32592226663359,0,0,0.445641827540694,0.294605907474837,0,0,0,0.130059347559878,0,0,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0.383220493601921,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,1.00803371612366,1.33720097891754,0.579297615531196,0,0,0.767175371061182,0,0.50133791063589,0,0,0,0,0,0,0.327447688744282,0,0,0,0.348259474598534,0.26591592103773,0.238490624305342,1.71598473234038,0.371457501329565,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0.560677600142307,0,0,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.794025282120147,0,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,11.3142981313507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0.462985512576611,0,0,0,0,1.17002132569619,0.297262324577456,0,0.16798212819886,0,0.0895585227028483,0,0,40.8910487453633,0.880484340132261,0.207328115540772,0.288239906833923,0.12624243342638,0.063497894292169,0,0,0,0.205654985406647,1.20137223137567,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.514414748524284,0,0,0.285955987316295,0.542621605391443,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0.179060963239896,0,0.788123040807709,0.431255149719035,0,0.76228387266739,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.431428401637234,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0.511707249066704,0,0,0.154209693802656,0,0.246381468041427,0,0,0,0,0.276242966807689,0.229628896329213,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,1.29549549661284,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.308097234229289,0.614014698904518,0.413509717453592,1.07420244868274,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,1.15755106853338,0.655894752046633,0,0,0,0.430234056612155,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,7.38443674301421,0,9.10196405712696,0,3.65036331547496,1.59764275323235,0,0,0,0,0,0,0,0,0,0,2.54004524022652,0.556812347790485,0,0,13.9890226559084,0,0,0.146508179271894,0,7.13237659375862,0,0,0,0,0,0,0,0.494411622680279,0.211125408127993,0.398495976502139,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0,0.361789315876224,0,0.552896299656123,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,7.67025246098414,7.05825123543862,5.37029078322697,9.10817917076088,6.19852658023477,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0.468528891450678,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0.174118413160805,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0.225980740780532,0.137041924646751,0.19871461170299,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6804229599104,0.558564802544508,0,0,0.199679000498991,0,0,0,0,0,0,0,0.0674035438541849,0,4.40301326742079,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,2.65013777824443,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0.395223263795889,0,0,0,0,0.306345576763462,0,0,0,0.366078794705889,0,0,0.221858103073705,0.124192805882767,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0.621748802331122,0.295710299979268,0,0,0,0,0,0,0.450772826991655,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,1.8137594048004,0,0,0,0,0,0,0,0,0,1.18812770967818,0,17.2270712320013,0,0,15.2203167852419,0,0,1.531227386766,0,0,0.319267718114302,0.205116364240755,0,0.0691572524642179,0.484426936895553,0,0,0,0,0,0.381382095467167,0,6.56423532983707,0.150420656698515,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0,0.177404740325278,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0.314231179832004,0.280272163313789,0.913158720509496,0.215927591218621,0.47775168788705,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.423387050190929,0.22910686854405,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| ||
|short_description=p6@PER3 | |||
}} | }} |
Latest revision as of 08:35, 19 September 2015
Short description: | p6@PER3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PER3_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_AK299123_5end |
EntrezGene: | PER3 |
HGNC: | 8847 |
UniProt: | B4DR65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.05e-11 | 168 |
hematopoietic cell | 7.29e-11 | 177 |
hematopoietic oligopotent progenitor cell | 5.81e-10 | 161 |
hematopoietic multipotent progenitor cell | 5.81e-10 | 161 |
myeloid cell | 3.43e-09 | 108 |
common myeloid progenitor | 3.43e-09 | 108 |
macrophage | 3.24e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.18e-21 | 39 |
hematologic cancer | 8.47e-21 | 51 |
immune system cancer | 8.47e-21 | 51 |
myeloid leukemia | 2.87e-19 | 31 |
chronic leukemia | 3.57e-17 | 8 |
hematopoietic system disease | 1.00e-11 | 2 |
acute myeloid leukemia | 4.85e-07 | 1 |
anemia | 9.48e-07 | 1 |