FFCP PHASE1:Hg19::chr1:85049005..85049017,-: Difference between revisions
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|id=chr1:85049005..85049017,-
|short_description=p@chr1:85049005..85049017,-
|description=CAGE_peak_at_chr1:85049005..85049017,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:85049005..85049017,- | |||
|description=CAGE_peak_at_chr1:85049005..85049017,- | |||
|id=chr1:85049005..85049017,- | |||
|ontology_enrichment_celltype=CL:0000333!1.17e-08!41;CL:0000133!7.44e-08!59;CL:0000064!1.12e-07!3;CL:0005012!1.12e-07!3;CL:0000067!1.12e-07!3;CL:0002304!1.12e-07!3;CL:0002322!1.38e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.39e-36;5!CL:0002591;5.71e-21;1!CL:0002321;1.06e-12;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,7.72e-21,1;CL:0000333,7.71e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0010227;5.71e-21;1!UBERON:0003056;4.52e-08;3 | |||
|ontology_enrichment_disease=DOID:171!4.01e-11!10;DOID:169!2.54e-07!6;DOID:3095!4.19e-07!22;DOID:2994!4.19e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:169;1.25e-30;6!DOID:171;1.07e-18;10!DOID:3095;7.41e-09;22!DOID:2994;7.41e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.25e-30,6;DOID:171,1.07e-18,10;DOID:3095,7.41e-09,22;DOID:2994,7.41e-09,22 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.27e-12!11;UBERON:0000970!8.26e-12!20;UBERON:0002104!4.00e-11!21;UBERON:0000019!3.27e-10!19;UBERON:0000047!3.27e-10!19;UBERON:0004088!3.27e-10!19;UBERON:0003072!3.27e-10!19;UBERON:0003071!3.27e-10!19;UBERON:0004128!3.27e-10!19;UBERON:0000020!6.18e-10!23;UBERON:0000488!1.10e-09!4;UBERON:0001032!2.04e-09!24;UBERON:0004456!2.04e-09!24;UBERON:0001456!4.94e-09!21;UBERON:0000013!7.95e-09!5;UBERON:0002410!7.95e-09!5;UBERON:0000966!9.51e-08!5;UBERON:0005388!9.51e-08!5;UBERON:0001802!9.51e-08!5;UBERON:0001778!1.12e-07!3;UBERON:0001775!1.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.39e-36;5!UBERON:0002410;1.39e-36;5!UBERON:0002079;5.71e-21;1!UBERON:0000010;1.09e-20;8!UBERON:0000078;3.52e-11;2!UBERON:0002081;3.52e-11;2!UBERON:0002012;3.52e-11;2!UBERON:0008886;3.52e-11;2!UBERON:0004151;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.39e-36,5;UBERON:0002410,1.39e-36,5;UBERON:0002079,4.22e-21,1;UBERON:0000010,1.09e-20,8;UBERON:0002081,3.02e-11,2;UBERON:0010227,3.02e-11,2;UBERON:0000078,4.09e-11,2;UBERON:0007497,4.09e-11,2;UBERON:0003643,4.09e-11,2;UBERON:0003504,4.09e-11,2;UBERON:0003469,4.09e-11,2;UBERON:0003496,4.09e-11,2;UBERON:0002012,4.09e-11,2;UBERON:0008886,4.09e-11,2;UBERON:0007303,4.09e-11,2;UBERON:0002061,4.09e-11,2;UBERON:0005432,4.09e-11,2;UBERON:0004363,4.09e-11,2;UBERON:0000948,5.36e-08,24;UBERON:0005498,5.36e-08,24;UBERON:0004140,5.36e-08,24;UBERON:0009881,5.36e-08,24;UBERON:0004141,5.36e-08,24;UBERON:0003084,5.36e-08,24;UBERON:0007005,5.36e-08,24;UBERON:0004139,5.36e-08,24;UBERON:0004291,5.36e-08,24;UBERON:0004151,6.34e-08,3;UBERON:0004145,7.76e-08,3;UBERON:0007100,3.59e-07,27 | |||
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| ||
|short_description=p@chr1:85049005..85049017,- | |||
}} | }} |
Latest revision as of 10:45, 28 July 2015
Short description: | p@chr1:85049005..85049017, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:85049005..85049017, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 7.72e-21 | 1 |
migratory neural crest cell | 7.71e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.39e-36 | 5 |
autonomic nervous system | 1.39e-36 | 5 |
left cardiac atrium | 4.22e-21 | 1 |
peripheral nervous system | 1.09e-20 | 8 |
cardiac atrium | 3.02e-11 | 2 |
future cardiac atrium | 3.02e-11 | 2 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.09e-11 | 2 |
developing epithelial placode | 4.09e-11 | 2 |
respiratory system arterial blood vessel | 4.09e-11 | 2 |
respiratory system blood vessel | 4.09e-11 | 2 |
respiratory system artery | 4.09e-11 | 2 |
head blood vessel | 4.09e-11 | 2 |
pulmonary artery | 4.09e-11 | 2 |
pulmonary vascular system | 4.09e-11 | 2 |
pharyngeal vasculature | 4.09e-11 | 2 |
truncus arteriosus | 4.09e-11 | 2 |
aortic sac | 4.09e-11 | 2 |
pharyngeal arch artery | 4.09e-11 | 2 |
heart | 5.36e-08 | 24 |
primitive heart tube | 5.36e-08 | 24 |
primary heart field | 5.36e-08 | 24 |
anterior lateral plate mesoderm | 5.36e-08 | 24 |
heart tube | 5.36e-08 | 24 |
heart primordium | 5.36e-08 | 24 |
cardiac mesoderm | 5.36e-08 | 24 |
cardiogenic plate | 5.36e-08 | 24 |
heart rudiment | 5.36e-08 | 24 |
cardiac chamber | 6.34e-08 | 3 |
outflow tract | 7.76e-08 | 3 |
primary circulatory organ | 3.59e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.25e-30 | 6 |
neuroectodermal tumor | 1.07e-18 | 10 |
germ cell and embryonal cancer | 7.41e-09 | 22 |
germ cell cancer | 7.41e-09 | 22 |