FFCP PHASE1:Hg19::chr2:55214774..55214796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57142 | |EntrezGene=57142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14085 | |HGNC=14085 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000486085_5end | |association_with_transcript=-5bp_to_ENST00000486085_5end | ||
|cluster_id=chr2:55214774..55214796,- | |||
|description=CAGE_peak_14_at_RTN4_5end | |description=CAGE_peak_14_at_RTN4_5end | ||
|id=chr2:55214774..55214796,- | |id=chr2:55214774..55214796,- | ||
|ontology_enrichment_celltype=CL:0000055!4.98e-14!180;CL:0000057!2.89e-11!75;CL:0000222!2.12e-08!119;CL:0000680!1.93e-07!57;CL:0000056!1.93e-07!57;CL:0000355!1.93e-07!57;CL:0000192!6.91e-07!42;CL:0000514!6.91e-07!42;CL:0000393!8.60e-07!60;CL:0000211!8.60e-07!60 | |ontology_enrichment_celltype=CL:0000055!4.98e-14!180;CL:0000057!2.89e-11!75;CL:0000222!2.12e-08!119;CL:0000680!1.93e-07!57;CL:0000056!1.93e-07!57;CL:0000355!1.93e-07!57;CL:0000192!6.91e-07!42;CL:0000514!6.91e-07!42;CL:0000393!8.60e-07!60;CL:0000211!8.60e-07!60 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.59e-09,76;CL:0000222,8.25e-08,121 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.18e-09!83;UBERON:0002329!2.18e-09!83;UBERON:0003077!2.18e-09!83;UBERON:0003059!2.18e-09!83;UBERON:0007282!2.18e-09!83;UBERON:0009618!2.18e-09!83;UBERON:0007285!2.18e-09!83;UBERON:0000468!2.74e-09!659;UBERON:0004290!1.14e-08!70;UBERON:0000467!1.24e-08!625;UBERON:0000480!1.27e-08!626;UBERON:0000486!2.25e-08!82;UBERON:0001134!4.90e-07!61;UBERON:0002036!4.90e-07!61;UBERON:0003082!4.90e-07!61 | |ontology_enrichment_uberon=UBERON:0000914!2.18e-09!83;UBERON:0002329!2.18e-09!83;UBERON:0003077!2.18e-09!83;UBERON:0003059!2.18e-09!83;UBERON:0007282!2.18e-09!83;UBERON:0009618!2.18e-09!83;UBERON:0007285!2.18e-09!83;UBERON:0000468!2.74e-09!659;UBERON:0004290!1.14e-08!70;UBERON:0000467!1.24e-08!625;UBERON:0000480!1.27e-08!626;UBERON:0000486!2.25e-08!82;UBERON:0001134!4.90e-07!61;UBERON:0002036!4.90e-07!61;UBERON:0003082!4.90e-07!61 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,4.12e-08,73;UBERON:0000926,4.75e-08,315;UBERON:0004120,4.75e-08,315;UBERON:0006603,4.75e-08,315;UBERON:0002329,7.76e-08,71;UBERON:0003059,7.76e-08,71;UBERON:0007282,7.76e-08,71;UBERON:0004290,7.76e-08,71;UBERON:0009618,7.76e-08,71;UBERON:0007503,1.12e-07,78;UBERON:0003077,1.39e-07,72;UBERON:0007285,1.39e-07,72;UBERON:0000486,2.15e-07,83 | |||
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| ||
|short_description=p14@RTN4 | |short_description=p14@RTN4 | ||
}} | }} |
Latest revision as of 16:36, 17 September 2015
Short description: | p14@RTN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RTN4_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000486085_5end |
EntrezGene: | RTN4 |
HGNC: | 14085 |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.59e-09 | 76 |
mesodermal cell | 8.25e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 4.12e-08 | 73 |
mesoderm | 4.75e-08 | 315 |
mesoderm-derived structure | 4.75e-08 | 315 |
presumptive mesoderm | 4.75e-08 | 315 |
somite | 7.76e-08 | 71 |
presomitic mesoderm | 7.76e-08 | 71 |
presumptive segmental plate | 7.76e-08 | 71 |
dermomyotome | 7.76e-08 | 71 |
trunk paraxial mesoderm | 7.76e-08 | 71 |
epithelial vesicle | 1.12e-07 | 78 |
paraxial mesoderm | 1.39e-07 | 72 |
presumptive paraxial mesoderm | 1.39e-07 | 72 |
multilaminar epithelium | 2.15e-07 | 83 |