FFCP PHASE1:Hg19::chr1:85741577..85741590,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:85741577..85741590,+
|short_description=p3@LOC646626
|description=CAGE_peak_3_at_LOC646626_5end
|association_with_transcript=-450bp_to_NR_045484_5end
|Ent...") |
No edit summary |
||
(13 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=646626 | |EntrezGene=646626 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-450bp_to_NR_045484_5end | |||
|cluster_id=chr1:85741577..85741590,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_LOC646626_5end | |||
|id=chr1:85741577..85741590,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.60e-28!24;CL:0000826!4.60e-28!24;CL:0000236!5.05e-18!14;CL:0000738!1.41e-17!140;CL:0002087!1.22e-15!119;CL:0000838!3.39e-14!52;CL:0000542!9.81e-14!53;CL:0000051!9.81e-14!53;CL:0002031!1.36e-13!124;CL:0000037!8.92e-11!172;CL:0000566!8.92e-11!172;CL:0000988!3.37e-10!182;CL:0002032!1.45e-09!165;CL:0000837!1.45e-09!165;CL:0002057!8.06e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.41e-69;24!CL:0000236;2.02e-44;13!CL:0000542;1.02e-20;53!CL:0002144;2.91e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.50e-69,24;CL:0000826,1.50e-69,24;CL:0000236,7.50e-48,14;CL:0000838,4.47e-32,52;CL:0000542,2.30e-31,53;CL:0000051,2.30e-31,53;CL:0000738,7.86e-16,136;CL:0002031,1.02e-15,120;CL:0002087,3.11e-15,115;CL:0002032,2.35e-12,161;CL:0000837,2.35e-12,161;CL:0002144,3.35e-12,3;CL:0000037,1.43e-11,168;CL:0000988,1.18e-10,177;CL:0000785,1.68e-08,2;CL:0000955,1.68e-08,2;CL:0000818,1.68e-08,2;CL:0000954,1.68e-08,2;CL:0000816,1.68e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.02e-20;53!CL:0000954;1.75e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.38e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.72e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.28e-09!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0010523;2.91e-12;3!UBERON:0001915;2.91e-12;3!UBERON:0001982;2.91e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,3.35e-12,3;UBERON:0001915,3.35e-12,3;UBERON:0001982,3.35e-12,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,1.37544130346312,1.14940825229924,1.02324015707783,0.786728553697808,0,0.154816123316076,0,0,0,2.24654881682875,1.84820002233648,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0.697287110717054,0,0.309706370895104,0.28769239232215,1.0246428261164,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0.75374599577023,1.0429658368404,0,0,0.736555271975129,0.316462387440884,0,0.850417199860174,0,0,0,0.16072558669708,0.285012743741249,0,0.365328307529268,7.03984977845291,7.09980194640771,9.7846017924991,16.6424786800938,7.60752375368424,9.77079147922622,4.62731410949403,7.63243003628291,11.384259382189,10.5702694086769,10.3213771593812,0,0,0,0.983548850569165,0.393010762749165,1.02800749499755,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.260118695119756,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0.516833518338658,0.71153252537342,2.34304428935269,1.20848795132744,3.04108842287405,1.22031028774085,0.367663080345869,0,0,0.22452937262617,0,0,0,0,6.58902087180316,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,2.18196896472668,0.860413786167011,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,0.100528972411631,0.185176890317059,0,0,0,0,0,1.01056513432752,0,0.951270761172991,0,0,0,0,0.148631162288728,0,4.03157107677263,1.98485136139341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.02090169995667,0,0,0.31481234683064,0,0,0,0,0.74129687641568,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,1.70599442741899,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0,0.507447609232169,0,1.70894156152249,0.476463550915578,2.46817363851717,0,1.08006287447623,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.38141957765574,0,0.102268682502155,1.6001024709939,0,0.0898683511473268,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0,0.995261931078505,0.176915129006678,0,0,0,0.104421949505455,0,0,0,1.27718352450966,0,0.242780379534093,0,0,0,0.063186579628488,0.751617097072463,0,0,0,0,0,3.13070500632772,0,0.173559738335131,0.587954384486266,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0.321506296930038,0.412618309791701,0.415440338029185,1.1248694577575,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0.992332043623902,2.37133958277533,1.94868157409433,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,1.26757386311357,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,2.52017555398455,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.4097587696978,0.966868319603658,1.19929387109915,0,0.352894871715692,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.387533459016037,0.31037357147929,0,0,0,0.217716747896961,0,1.95320953742304,0.143444410785353,0,0.407016343054873,0,0,0.179650404213174,0,0,0,0,1.20764276154616,5.12909587685173 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0.602694528023977,1.46062018077475,0,0,0,0,0,0,0,1.37544130346312,1.14940825229924,1.02324015707783,0.786728553697808,0,0.154816123316076,0,0,0,2.24654881682875,1.84820002233648,0,0.553995408531877,0,0.434021741431704,0,0,0,0,0,0,0.697287110717054,0,0.309706370895104,0.28769239232215,1.0246428261164,0,0,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0,0.580418477257168,1.13477044938228,0,0.75374599577023,1.0429658368404,0,0,0.736555271975129,0.316462387440884,0,0.850417199860174,0,0,0,0.16072558669708,0.285012743741249,0,0.365328307529268,7.03984977845291,7.09980194640771,9.7846017924991,16.6424786800938,7.60752375368424,9.77079147922622,4.62731410949403,7.63243003628291,11.384259382189,10.5702694086769,10.3213771593812,0,0,0,0.983548850569165,0.393010762749165,1.02800749499755,0.167186495390678,0,0,0,0.334231370655521,0,0,0,0.25618263945135,0.260118695119756,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0.419499436209906,0,0,0.516833518338658,0.71153252537342,2.34304428935269,1.20848795132744,3.04108842287405,1.22031028774085,0.367663080345869,0,0,0.22452937262617,0,0,0,0,6.58902087180316,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,2.18196896472668,0.860413786167011,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0.439001141634502,2.24803506515239,0.100528972411631,0.185176890317059,0,0,0,0,0,1.01056513432752,0,0.951270761172991,0,0,0,0,0.148631162288728,0,4.03157107677263,1.98485136139341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431255149719035,0.385029108839245,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.647142602455851,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.308061348417659,0,0,0.422206515571503,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,1.02090169995667,0,0,0.31481234683064,0,0,0,0,0.74129687641568,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0.202182481573316,0,0,0,1.70599442741899,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.6196469961995,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0.886860307073351,0,0.507447609232169,0,1.70894156152249,0.476463550915578,2.46817363851717,0,1.08006287447623,0,0,0,0.490080431962063,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,1.38141957765574,0,0.102268682502155,1.6001024709939,0,0.0898683511473268,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0,0.995261931078505,0.176915129006678,0,0,0,0.104421949505455,0,0,0,1.27718352450966,0,0.242780379534093,0,0,0,0.063186579628488,0.751617097072463,0,0,0,0,0,3.13070500632772,0,0.173559738335131,0.587954384486266,0.0870592065804026,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0.160317640503067,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0.321506296930038,0.412618309791701,0.415440338029185,1.1248694577575,0.77380195455795,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0.992332043623902,2.37133958277533,1.94868157409433,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0.138258436151731,0,0.132864840313363,0,0,0,0,0,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,0,0.366857197043358,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.638812138197976,0,0,0,0,0,1.26757386311357,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0,0,2.52017555398455,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,1.4097587696978,0.966868319603658,1.19929387109915,0,0.352894871715692,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.387533459016037,0.31037357147929,0,0,0,0.217716747896961,0,1.95320953742304,0.143444410785353,0,0.407016343054873,0,0,0.179650404213174,0,0,0,0,1.20764276154616,5.12909587685173 | ||
|short_description=p3@LOC646626 | |||
}} | }} |
Latest revision as of 12:53, 19 September 2015
Short description: | p3@LOC646626 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LOC646626_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -450bp_to_NR_045484_5end |
EntrezGene: | LOC646626 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.50e-69 | 24 |
pro-B cell | 1.50e-69 | 24 |
B cell | 7.50e-48 | 14 |
lymphoid lineage restricted progenitor cell | 4.47e-32 | 52 |
lymphocyte | 2.30e-31 | 53 |
common lymphoid progenitor | 2.30e-31 | 53 |
leukocyte | 7.86e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 1.02e-15 | 120 |
nongranular leukocyte | 3.11e-15 | 115 |
hematopoietic oligopotent progenitor cell | 2.35e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.35e-12 | 161 |
capillary endothelial cell | 3.35e-12 | 3 |
hematopoietic stem cell | 1.43e-11 | 168 |
hematopoietic cell | 1.18e-10 | 177 |
mature B cell | 1.68e-08 | 2 |
pre-B-II cell | 1.68e-08 | 2 |
transitional stage B cell | 1.68e-08 | 2 |
small pre-B-II cell | 1.68e-08 | 2 |
immature B cell | 1.68e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 3.35e-12 | 3 |
endothelium of capillary | 3.35e-12 | 3 |
capillary | 3.35e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.72e-09 | 10 |