FFCP PHASE1:Hg19::chr11:36710140..36710144,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:36710140..36710144,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_at_chr11:36710140..36710144,+ | |description=CAGE_peak_at_chr11:36710140..36710144,+ | ||
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|ontology_enrichment_celltype=CL:0000084!5.49e-09!25;CL:0000827!5.49e-09!25 | |ontology_enrichment_celltype=CL:0000084!5.49e-09!25;CL:0000827!5.49e-09!25 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.14e-50!4;UBERON:0005058!5.14e-50!4;UBERON:0009113!5.14e-50!4;UBERON:0003295!5.14e-50!4;UBERON:0005562!5.14e-50!4;UBERON:0003351!8.35e-34!6;UBERON:0004177!3.65e-29!7;UBERON:0000974!8.54e-21!10;UBERON:0003408!8.54e-21!10;UBERON:0001042!8.54e-21!10;UBERON:0009145!8.54e-21!10;UBERON:0006562!5.14e-19!11;UBERON:0009722!5.14e-19!11;UBERON:0007690!5.14e-19!11;UBERON:0008814!2.94e-14!15;UBERON:0001557!1.72e-11!19;UBERON:0005057!1.11e-08!26;UBERON:0004807!3.92e-08!28 | |ontology_enrichment_uberon=UBERON:0002370!5.14e-50!4;UBERON:0005058!5.14e-50!4;UBERON:0009113!5.14e-50!4;UBERON:0003295!5.14e-50!4;UBERON:0005562!5.14e-50!4;UBERON:0003351!8.35e-34!6;UBERON:0004177!3.65e-29!7;UBERON:0000974!8.54e-21!10;UBERON:0003408!8.54e-21!10;UBERON:0001042!8.54e-21!10;UBERON:0009145!8.54e-21!10;UBERON:0006562!5.14e-19!11;UBERON:0009722!5.14e-19!11;UBERON:0007690!5.14e-19!11;UBERON:0008814!2.94e-14!15;UBERON:0001557!1.72e-11!19;UBERON:0005057!1.11e-08!26;UBERON:0004807!3.92e-08!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.52e-50;2!UBERON:0005058;3.52e-50;2!UBERON:0009113;3.52e-50;2!UBERON:0004177;4.66e-21;5!UBERON:0005057;4.66e-21;5 | |ontology_enrichment_uberon_v019=UBERON:0002370;3.52e-50;2!UBERON:0005058;3.52e-50;2!UBERON:0009113;3.52e-50;2!UBERON:0004177;4.66e-21;5!UBERON:0005057;4.66e-21;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,7.14e-26,4;UBERON:0005058,7.14e-26,4;UBERON:0009113,7.14e-26,4;UBERON:0003295,7.14e-26,4;UBERON:0005562,7.14e-26,4;UBERON:0003351,9.07e-18,6;UBERON:0004177,1.91e-15,7;UBERON:0005057,1.91e-15,7;UBERON:0000974,3.02e-11,10;UBERON:0003408,3.02e-11,10;UBERON:0001042,3.02e-11,10;UBERON:0009145,3.02e-11,10;UBERON:0006562,2.37e-10,11;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p@chr11:36710140..36710144,+ | |short_description=p@chr11:36710140..36710144,+ | ||
}} | }} |
Latest revision as of 22:04, 23 July 2015
Short description: | p@chr11:36710140..36710144, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:36710140..36710144, + |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 7.14e-26 | 4 |
hemolymphoid system gland | 7.14e-26 | 4 |
thymic region | 7.14e-26 | 4 |
pharyngeal gland | 7.14e-26 | 4 |
thymus primordium | 7.14e-26 | 4 |
pharyngeal epithelium | 9.07e-18 | 6 |
hemopoietic organ | 1.91e-15 | 7 |
immune organ | 1.91e-15 | 7 |
neck | 3.02e-11 | 10 |
gland of gut | 3.02e-11 | 10 |
chordate pharynx | 3.02e-11 | 10 |
pharyngeal region of foregut | 3.02e-11 | 10 |
pharynx | 2.37e-10 | 11 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |