FFCP PHASE1:Hg19::chr1:161736038..161736056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22926 | |EntrezGene=22926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=791 | |HGNC=791 | ||
|TSSclassifier=strong | |||
|UniProt=A8K383,P18850 | |UniProt=A8K383,P18850 | ||
|association_with_transcript=4bp_to_NM_007348_5end | |association_with_transcript=4bp_to_NM_007348_5end | ||
|cluster_id=chr1:161736038..161736056,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_4_at_ATF6_5end | |description=CAGE_peak_4_at_ATF6_5end | ||
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|ontology_enrichment_celltype=CL:0002032!1.78e-23!165;CL:0000837!1.78e-23!165;CL:0000037!1.94e-23!172;CL:0000566!1.94e-23!172;CL:0000738!4.78e-22!140;CL:0000988!6.87e-22!182;CL:0002031!1.95e-18!124;CL:0002087!8.05e-17!119;CL:0000860!2.36e-16!45;CL:0000763!3.39e-15!112;CL:0000049!3.39e-15!112;CL:0002057!4.81e-15!42;CL:0000766!1.47e-12!76;CL:0000557!1.54e-10!71;CL:0000839!2.79e-10!70;CL:0002009!9.11e-10!65;CL:0002194!6.88e-09!63;CL:0000576!6.88e-09!63;CL:0000040!6.88e-09!63;CL:0000559!6.88e-09!63;CL:0000542!4.10e-08!53;CL:0000051!4.10e-08!53;CL:0000838!8.44e-08!52 | |ontology_enrichment_celltype=CL:0002032!1.78e-23!165;CL:0000837!1.78e-23!165;CL:0000037!1.94e-23!172;CL:0000566!1.94e-23!172;CL:0000738!4.78e-22!140;CL:0000988!6.87e-22!182;CL:0002031!1.95e-18!124;CL:0002087!8.05e-17!119;CL:0000860!2.36e-16!45;CL:0000763!3.39e-15!112;CL:0000049!3.39e-15!112;CL:0002057!4.81e-15!42;CL:0000766!1.47e-12!76;CL:0000557!1.54e-10!71;CL:0000839!2.79e-10!70;CL:0002009!9.11e-10!65;CL:0002194!6.88e-09!63;CL:0000576!6.88e-09!63;CL:0000040!6.88e-09!63;CL:0000559!6.88e-09!63;CL:0000542!4.10e-08!53;CL:0000051!4.10e-08!53;CL:0000838!8.44e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.72e-16;33!CL:0002057;4.72e-16;33!CL:0000576;3.60e-10;48!CL:0000473;1.30e-09;39!CL:0000234;1.30e-09;39!CL:0002087;4.44e-08;104!CL:0000766;3.30e-07;69 | |ontology_enrichment_celltype_v019=CL:0000860;4.72e-16;33!CL:0002057;4.72e-16;33!CL:0000576;3.60e-10;48!CL:0000473;1.30e-09;39!CL:0000234;1.30e-09;39!CL:0002087;4.44e-08;104!CL:0000766;3.30e-07;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.24e-23,168;CL:0002032,1.14e-22,161;CL:0000837,1.14e-22,161;CL:0000738,1.43e-21,136;CL:0000988,1.44e-21,177;CL:0002031,1.27e-17,120;CL:0002087,6.01e-16,115;CL:0000860,7.08e-16,42;CL:0002057,7.08e-16,42;CL:0000763,6.11e-15,108;CL:0000049,6.11e-15,108;CL:0000766,2.19e-12,72;CL:0000473,9.85e-12,48;CL:0000234,9.85e-12,48;CL:0000557,2.98e-10,67;CL:0000839,5.58e-10,66;CL:0002009,1.97e-09,61;CL:0002194,1.65e-08,59;CL:0000576,1.65e-08,59;CL:0000040,1.65e-08,59;CL:0000559,1.65e-08,59;CL:0000542,1.14e-07,53;CL:0000051,1.14e-07,53;CL:0000838,2.39e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;3.02e-12;42 | |ontology_enrichment_development_v019=CL:0002057;3.02e-12;42 | ||
|ontology_enrichment_disease=DOID:162!2.54e-11!235;DOID:305!7.28e-11!106;DOID:14566!1.52e-10!239;DOID:0050687!2.22e-09!143 | |ontology_enrichment_disease=DOID:162!2.54e-11!235;DOID:305!7.28e-11!106;DOID:14566!1.52e-10!239;DOID:0050687!2.22e-09!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,1.78e-10,106;DOID:162,2.89e-10,235;DOID:14566,1.57e-09,239;DOID:0050687,6.73e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.23e-15!112;UBERON:0002390!1.42e-14!102;UBERON:0003061!1.42e-14!102;UBERON:0002405!2.14e-09!115;UBERON:0001474!3.70e-09!86;UBERON:0002371!1.55e-08!80;UBERON:0000178!1.15e-07!15;UBERON:0000179!1.15e-07!15;UBERON:0000463!1.15e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!5.23e-15!112;UBERON:0002390!1.42e-14!102;UBERON:0003061!1.42e-14!102;UBERON:0002405!2.14e-09!115;UBERON:0001474!3.70e-09!86;UBERON:0002371!1.55e-08!80;UBERON:0000178!1.15e-07!15;UBERON:0000179!1.15e-07!15;UBERON:0000463!1.15e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.94e-08;15!UBERON:0000179;5.94e-08;15!UBERON:0000463;5.94e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.94e-08;15!UBERON:0000179;5.94e-08;15!UBERON:0000463;5.94e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.89e-15,108;UBERON:0002390,2.83e-14,98;UBERON:0003061,2.83e-14,98;UBERON:0002405,7.73e-10,93;UBERON:0001474,7.53e-09,82;UBERON:0002371,3.87e-08,76;UBERON:0000178,3.94e-08,15;UBERON:0000179,3.94e-08,15;UBERON:0000463,3.94e-08,15 | |||
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| ||
|short_description=p4@ATF6 | |short_description=p4@ATF6 | ||
}} | }} |
Latest revision as of 06:41, 18 September 2015
Short description: | p4@ATF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATF6_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 4bp_to_NM_007348_5end |
EntrezGene: | ATF6 |
HGNC: | 791 |
UniProt: | A8K383P18850 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.24e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.14e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-22 | 161 |
leukocyte | 1.43e-21 | 136 |
hematopoietic cell | 1.44e-21 | 177 |
hematopoietic lineage restricted progenitor cell | 1.27e-17 | 120 |
nongranular leukocyte | 6.01e-16 | 115 |
classical monocyte | 7.08e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.08e-16 | 42 |
myeloid cell | 6.11e-15 | 108 |
common myeloid progenitor | 6.11e-15 | 108 |
myeloid leukocyte | 2.19e-12 | 72 |
defensive cell | 9.85e-12 | 48 |
phagocyte | 9.85e-12 | 48 |
granulocyte monocyte progenitor cell | 2.98e-10 | 67 |
myeloid lineage restricted progenitor cell | 5.58e-10 | 66 |
macrophage dendritic cell progenitor | 1.97e-09 | 61 |
monopoietic cell | 1.65e-08 | 59 |
monocyte | 1.65e-08 | 59 |
monoblast | 1.65e-08 | 59 |
promonocyte | 1.65e-08 | 59 |
lymphocyte | 1.14e-07 | 53 |
common lymphoid progenitor | 1.14e-07 | 53 |
lymphoid lineage restricted progenitor cell | 2.39e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.89e-15 | 108 |
hematopoietic system | 2.83e-14 | 98 |
blood island | 2.83e-14 | 98 |
immune system | 7.73e-10 | 93 |
bone element | 7.53e-09 | 82 |
bone marrow | 3.87e-08 | 76 |
blood | 3.94e-08 | 15 |
haemolymphatic fluid | 3.94e-08 | 15 |
organism substance | 3.94e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.78e-10 | 106 |
cancer | 2.89e-10 | 235 |
disease of cellular proliferation | 1.57e-09 | 239 |
cell type cancer | 6.73e-09 | 143 |