FFCP PHASE1:Hg19::chr9:14869009..14869025,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158326 | |EntrezGene=158326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=23399 | |HGNC=23399 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-33bp_to_BC172226_5end | |association_with_transcript=-33bp_to_BC172226_5end | ||
|cluster_id=chr9:14869009..14869025,- | |||
|coexpression_cluster_id=C55 | |coexpression_cluster_id=C55 | ||
|description=CAGE_peak_8_at_FREM1_5end | |description=CAGE_peak_8_at_FREM1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.70e-15!12;CL:0000417!1.70e-15!12;CL:0000668!1.70e-15!12;CL:0000414!1.70e-15!12;CL:0000412!1.70e-15!12;CL:0000182!1.70e-15!12;CL:0000167!1.57e-12!1;CL:0000164!1.57e-12!1;CL:0000502!1.57e-12!1;CL:0000172!1.57e-12!1;CL:0000173!1.57e-12!1;CL:0002351!1.57e-12!1;CL:0002322!1.16e-09!5 | |ontology_enrichment_celltype=CL:0000181!1.70e-15!12;CL:0000417!1.70e-15!12;CL:0000668!1.70e-15!12;CL:0000414!1.70e-15!12;CL:0000412!1.70e-15!12;CL:0000182!1.70e-15!12;CL:0000167!1.57e-12!1;CL:0000164!1.57e-12!1;CL:0000502!1.57e-12!1;CL:0000172!1.57e-12!1;CL:0000173!1.57e-12!1;CL:0002351!1.57e-12!1;CL:0002322!1.16e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.03e-44;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.03e-44;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.03e-44,12;CL:0000223,1.02e-09,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.24e-48;11!UBERON:0009497;4.54e-41;13!UBERON:0003104;6.41e-27;31!UBERON:0001041;3.13e-18;30 | |ontology_enrichment_development_v019=UBERON:0004161;2.24e-48;11!UBERON:0009497;4.54e-41;13!UBERON:0003104;6.41e-27;31!UBERON:0001041;3.13e-18;30 | ||
|ontology_enrichment_disease=DOID:4430!1.57e-12!1;DOID:1909!5.73e-07!2 | |ontology_enrichment_disease=DOID:4430!1.57e-12!1;DOID:1909!5.73e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1909;1.17e-17;2!DOID:7;3.45e-13;39 | |ontology_enrichment_disease_v019=DOID:1909;1.17e-17;2!DOID:7;3.45e-13;39 | ||
|ontology_enrichment_disease_v019_2=DOID:1909,1.07e-17,2;DOID:7,3.56e-14,39 | |||
|ontology_enrichment_uberon=UBERON:0001896!2.21e-15!3;UBERON:0005290!2.21e-15!3;UBERON:0010096!2.21e-15!3;UBERON:0005057!8.94e-11!26;UBERON:0002107!7.21e-10!19;UBERON:0006925!7.21e-10!19;UBERON:0008836!7.21e-10!19;UBERON:0008835!1.51e-08!22;UBERON:0003894!1.51e-08!22;UBERON:0009854!3.51e-08!23;UBERON:0002368!5.68e-08!35;UBERON:0007499!1.54e-07!25;UBERON:0009497!1.54e-07!25;UBERON:0000015!1.54e-07!25;UBERON:0002423!1.54e-07!25;UBERON:0006235!1.54e-07!25;UBERON:0004161!1.54e-07!25;UBERON:0009856!2.97e-07!26;UBERON:0003076!4.07e-07!15;UBERON:0003057!4.07e-07!15;UBERON:0003929!4.16e-07!54 | |ontology_enrichment_uberon=UBERON:0001896!2.21e-15!3;UBERON:0005290!2.21e-15!3;UBERON:0010096!2.21e-15!3;UBERON:0005057!8.94e-11!26;UBERON:0002107!7.21e-10!19;UBERON:0006925!7.21e-10!19;UBERON:0008836!7.21e-10!19;UBERON:0008835!1.51e-08!22;UBERON:0003894!1.51e-08!22;UBERON:0009854!3.51e-08!23;UBERON:0002368!5.68e-08!35;UBERON:0007499!1.54e-07!25;UBERON:0009497!1.54e-07!25;UBERON:0000015!1.54e-07!25;UBERON:0002423!1.54e-07!25;UBERON:0006235!1.54e-07!25;UBERON:0004161!1.54e-07!25;UBERON:0009856!2.97e-07!26;UBERON:0003076!4.07e-07!15;UBERON:0003057!4.07e-07!15;UBERON:0003929!4.16e-07!54 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;9.97e-17;31!UBERON:0002330;9.97e-17;31!UBERON:0002368;3.21e-15;33!UBERON:0000949;1.40e-11;43!UBERON:0002417;1.05e-07;58!UBERON:0000916;1.05e-07;58 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.32e-28;19!UBERON:0006925;2.32e-28;19!UBERON:0002423;9.78e-22;25!UBERON:0002365;9.97e-17;31!UBERON:0002330;9.97e-17;31!UBERON:0002368;3.21e-15;33!UBERON:0000949;1.40e-11;43!UBERON:0002417;1.05e-07;58!UBERON:0000916;1.05e-07;58 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.32e-28,19;UBERON:0006925,2.32e-28,19;UBERON:0008836,2.32e-28,19;UBERON:0008835,1.34e-24,22;UBERON:0003894,1.34e-24,22;UBERON:0009854,1.46e-23,23;UBERON:0007499,9.78e-22,25;UBERON:0009497,9.78e-22,25;UBERON:0000015,9.78e-22,25;UBERON:0002423,9.78e-22,25;UBERON:0006235,9.78e-22,25;UBERON:0004161,9.78e-22,25;UBERON:0009856,6.29e-21,26;UBERON:0002365,1.15e-17,31;UBERON:0002330,1.15e-17,31;UBERON:0002368,1.01e-15,35;UBERON:0000949,2.30e-12,45;UBERON:0003929,2.12e-10,54;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0002530,1.45e-09,59;UBERON:0002417,2.06e-09,60;UBERON:0000916,2.06e-09,60;UBERON:0005256,3.31e-07,122;UBERON:0005911,5.11e-07,82 | |||
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|short_description=p8@FREM1 | |short_description=p8@FREM1 | ||
}} | }} |
Latest revision as of 18:40, 16 September 2015
Short description: | p8@FREM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FREM1_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -33bp_to_BC172226_5end |
EntrezGene: | FREM1 |
HGNC: | 23399 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.03e-44 | 12 |
endodermal cell | 1.02e-09 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.32e-28 | 19 |
digestive gland | 2.32e-28 | 19 |
liver bud | 2.32e-28 | 19 |
hepatic diverticulum | 1.34e-24 | 22 |
liver primordium | 1.34e-24 | 22 |
digestive tract diverticulum | 1.46e-23 | 23 |
epithelial sac | 9.78e-22 | 25 |
epithelium of foregut-midgut junction | 9.78e-22 | 25 |
anatomical boundary | 9.78e-22 | 25 |
hepatobiliary system | 9.78e-22 | 25 |
foregut-midgut junction | 9.78e-22 | 25 |
septum transversum | 9.78e-22 | 25 |
sac | 6.29e-21 | 26 |
exocrine gland | 1.15e-17 | 31 |
exocrine system | 1.15e-17 | 31 |
endocrine gland | 1.01e-15 | 35 |
endocrine system | 2.30e-12 | 45 |
gut epithelium | 2.12e-10 | 54 |
abdomen element | 2.12e-10 | 54 |
abdominal segment element | 2.12e-10 | 54 |
gland | 1.45e-09 | 59 |
abdominal segment of trunk | 2.06e-09 | 60 |
abdomen | 2.06e-09 | 60 |
trunk mesenchyme | 3.31e-07 | 122 |
endo-epithelium | 5.11e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.07e-17 | 2 |
disease of anatomical entity | 3.56e-14 | 39 |