FFCP PHASE1:Hg19::chr12:30948600..30948609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100287314 | |EntrezGene=100287314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000550292,NR_040245_5end | |association_with_transcript=-5bp_to_ENST00000550292,NR_040245_5end | ||
|cluster_id=chr12:30948600..30948609,+ | |||
|description=CAGE_peak_5_at_LOC100287314_5end | |description=CAGE_peak_5_at_LOC100287314_5end | ||
|id=chr12:30948600..30948609,+ | |id=chr12:30948600..30948609,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002582;9.43e-11;3!CL:0002592;9.43e-11;3!CL:0002595;5.86e-07;5!CL:0002188;5.86e-07;5 | |ontology_enrichment_celltype_v019=CL:0002582;9.43e-11;3!CL:0002592;9.43e-11;3!CL:0002595;5.86e-07;5!CL:0002188;5.86e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002592,8.17e-11,3;CL:0002582,1.20e-10,3;CL:0002595,5.70e-07,5;CL:0002188,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4556;9.43e-11;3!DOID:3908;5.86e-07;5 | |ontology_enrichment_disease_v019=DOID:4556;9.43e-11;3!DOID:3908;5.86e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4556,7.42e-11,3;DOID:3908,5.08e-07,5 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003498;9.43e-11;3!UBERON:0005985;9.43e-11;3!UBERON:0001621;9.43e-11;3!UBERON:0003834;5.86e-07;5!UBERON:0001533;5.86e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0003498;9.43e-11;3!UBERON:0005985;9.43e-11;3!UBERON:0001621;9.43e-11;3!UBERON:0003834;5.86e-07;5!UBERON:0001533;5.86e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,8.17e-11,3;UBERON:0003498,5.38e-07,5;UBERON:0005985,5.38e-07,5;UBERON:0003834,5.70e-07,5;UBERON:0001533,5.70e-07,5 | |||
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|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0.81014194788176,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0.204154171254893,0,0,0,0.247266929278557,0,0.718618141816238,0,0,0.554128230968366,0,0,0,0,0.179389635688862,0,0,0,0,0,0.18611685633159,0.506328996723799,0.0974370051611986,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0,0.325808305310325,0,0,0,0.352226082707465,0.144366447761074,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0.207328115540772,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.306923946576125,0,0.128139149255701,0.511707249066704,0,0,0.308419387605311,0,0.0821271560138091,1.03850885836724,0,0,0.200506470303285,0.0920809889358963,0.114814448164607,0.182091168006717,0,0,0.0770153371044148,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.382838137483752,0.30347334256665,0,0,0,0.924100740528266,0,0.869932992075073,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,1.58510321173008,0.842516912477962,0,0,0,0.136499911407986,0,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81974010175699,0,0,0,0,0,0,0,0.614321404198464,0,0.140669416410513,0.111308705022906,0.16480387422676,0,0,0,0,0.409074730008619,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0,0,0,0,0,0.482385754501632,0,0.884634079449797,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0.661983911750998,0.313932918407225,0,0,0,0,0.195984794828755,0.0870592065804026,0,0.343972064943233,0.677294319023596,0.730893170861856,0.328461828212837,0.0969890164884194,0,0,0,0.596143835108969,0.126621591911757,0,0.160317640503067,0,0.39961921916426,0.288180834308212,0,0,0,0.745515213392595,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,1.79520572082991,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0.499921631848426,0.151649117541648,0,0.470531639396343,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0.228840068396924,0.151230923763239,0.15543720058278,0.147855149989634,0.318593534327405,0.449803112163605,0.155262956876259,0.829412415681711,0.265841714557995,0,0,0,0.406870733204662,0,0,0,0.398095888698616,0,0.343395705182793,0,0,0.385239660814607,0,0,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,0.353378291891762,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0.279759015438889,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0,0.345786262321089,0.322951291263702,0,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0.49131575253029,0,0.337687923091973,0,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0,0,0,0,0.271878931907327,0.131545547125698,0.236387681767936,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0.118332000730565,0.426067023795788,0,0,0,0,0,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0.297046400327086,0,0.169927114687817,0.0939839179798536,0,0,0.71421575442263,0,0.882655033580851,0,0,0,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0.801652215796681,0,0,0,0,0,0.103432995861895,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.325613074443898,0.320182037633146,0,0.359300808426348,0,0,0,0,0,0 | ||
|short_description=p5@LOC100287314 | |short_description=p5@LOC100287314 | ||
}} | }} |
Latest revision as of 02:52, 18 September 2015
Short description: | p5@LOC100287314 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LOC100287314_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000550292, NR_040245_5end |
EntrezGene: | LOC100287314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 8.17e-11 | 3 |
visceral preadipocyte | 1.20e-10 | 3 |
smooth muscle cell of the subclavian artery | 5.70e-07 | 5 |
glomerular endothelial cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 8.17e-11 | 3 |
heart blood vessel | 5.38e-07 | 5 |
coronary vessel | 5.38e-07 | 5 |
thoracic segment blood vessel | 5.70e-07 | 5 |
subclavian artery | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 7.42e-11 | 3 |
non-small cell lung carcinoma | 5.08e-07 | 5 |