FFCP PHASE1:Hg19::chr20:17640578..17640600,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:17640578..17640600,-
|short_description=p4@RRBP1
|description=CAGE_peak_4_at_RRBP1_5end
|association_with_transcript=23bp_to_AF007575_5end
|EntrezGene=62...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6238 | |EntrezGene=6238 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10448 | |HGNC=10448 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2E9 | |UniProt=Q9P2E9 | ||
|association_with_transcript=23bp_to_AF007575_5end | |||
|cluster_id=chr20:17640578..17640600,- | |||
|description=CAGE_peak_4_at_RRBP1_5end | |||
|id=chr20:17640578..17640600,- | |||
|ontology_enrichment_celltype=CL:0000055!7.98e-15!180;CL:0000057!8.41e-10!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.93e-08,76;CL:0000499,5.03e-07,28 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.10e-10!143;UBERON:0003102!1.07e-08!95;UBERON:0000914!2.30e-08!83;UBERON:0002329!2.30e-08!83;UBERON:0003077!2.30e-08!83;UBERON:0003059!2.30e-08!83;UBERON:0007282!2.30e-08!83;UBERON:0009618!2.30e-08!83;UBERON:0007285!2.30e-08!83;UBERON:0000490!7.22e-07!138 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.11e-11,122;UBERON:0000490,6.94e-09,148;UBERON:0003102,8.32e-09,99;UBERON:0007524,3.75e-08,73;UBERON:0002329,4.77e-08,71;UBERON:0003059,4.77e-08,71;UBERON:0007282,4.77e-08,71;UBERON:0004290,4.77e-08,71;UBERON:0009618,4.77e-08,71;UBERON:0000486,4.98e-08,83;UBERON:0007503,6.53e-08,78;UBERON:0003077,8.16e-08,72;UBERON:0007285,8.16e-08,72;UBERON:0003104,2.80e-07,160;UBERON:0009142,2.80e-07,160;UBERON:0002199,2.94e-07,46;UBERON:0002416,2.94e-07,46;UBERON:0001134,9.16e-07,62;UBERON:0002036,9.16e-07,62;UBERON:0003082,9.16e-07,62 | |||
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| ||
|short_description=p4@RRBP1 | |||
}} | }} |
Latest revision as of 06:28, 20 September 2015
Short description: | p4@RRBP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RRBP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 23bp_to_AF007575_5end |
EntrezGene: | RRBP1 |
HGNC: | 10448 |
UniProt: | Q9P2E9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.93e-08 | 76 |
stromal cell | 5.03e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.11e-11 | 122 |
unilaminar epithelium | 6.94e-09 | 148 |
surface structure | 8.32e-09 | 99 |
dense mesenchyme tissue | 3.75e-08 | 73 |
somite | 4.77e-08 | 71 |
presomitic mesoderm | 4.77e-08 | 71 |
presumptive segmental plate | 4.77e-08 | 71 |
dermomyotome | 4.77e-08 | 71 |
trunk paraxial mesoderm | 4.77e-08 | 71 |
multilaminar epithelium | 4.98e-08 | 83 |
epithelial vesicle | 6.53e-08 | 78 |
paraxial mesoderm | 8.16e-08 | 72 |
presumptive paraxial mesoderm | 8.16e-08 | 72 |
mesenchyme | 2.80e-07 | 160 |
entire embryonic mesenchyme | 2.80e-07 | 160 |
integument | 2.94e-07 | 46 |
integumental system | 2.94e-07 | 46 |
skeletal muscle tissue | 9.16e-07 | 62 |
striated muscle tissue | 9.16e-07 | 62 |
myotome | 9.16e-07 | 62 |