FFCP PHASE1:Hg19::chr16:28995212..28995244,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27040 | |EntrezGene=27040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=18874 | |HGNC=18874 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-281bp_to_uc002dsb.2,uc002dsc.2,uc002dsd.2_5end | |association_with_transcript=-281bp_to_uc002dsb.2,uc002dsc.2,uc002dsd.2_5end | ||
|cluster_id=chr16:28995212..28995244,+ | |||
|coexpression_cluster_id=C3550 | |coexpression_cluster_id=C3550 | ||
|description=CAGE_peak_5_at_LAT_5end | |description=CAGE_peak_5_at_LAT_5end | ||
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|ontology_enrichment_celltype=CL:0000763!1.10e-18!112;CL:0000049!1.10e-18!112;CL:0000037!5.40e-17!172;CL:0000566!5.40e-17!172;CL:0000988!1.79e-16!182;CL:0002032!4.71e-16!165;CL:0000837!4.71e-16!165;CL:0000766!3.92e-12!76;CL:0000738!1.20e-10!140;CL:0000557!1.26e-09!71;CL:0000839!5.50e-09!70;CL:0002274!6.40e-09!5;CL:0000457!6.40e-09!5;CL:0002191!6.40e-09!5;CL:0000097!6.40e-09!5;CL:0000831!6.40e-09!5;CL:0002028!6.40e-09!5;CL:0002031!6.83e-08!124 | |ontology_enrichment_celltype=CL:0000763!1.10e-18!112;CL:0000049!1.10e-18!112;CL:0000037!5.40e-17!172;CL:0000566!5.40e-17!172;CL:0000988!1.79e-16!182;CL:0002032!4.71e-16!165;CL:0000837!4.71e-16!165;CL:0000766!3.92e-12!76;CL:0000738!1.20e-10!140;CL:0000557!1.26e-09!71;CL:0000839!5.50e-09!70;CL:0002274!6.40e-09!5;CL:0000457!6.40e-09!5;CL:0002191!6.40e-09!5;CL:0000097!6.40e-09!5;CL:0000831!6.40e-09!5;CL:0002028!6.40e-09!5;CL:0002031!6.83e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.75e-23;5!CL:0000163;6.42e-13;9!CL:0000763;2.81e-09;100 | |ontology_enrichment_celltype_v019=CL:0000097;1.75e-23;5!CL:0000163;6.42e-13;9!CL:0000763;2.81e-09;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.60e-23,5;CL:0002028,1.60e-23,5;CL:0000763,7.35e-22,108;CL:0000049,7.35e-22,108;CL:0000037,1.58e-15,168;CL:0000988,2.10e-14,177;CL:0002032,6.61e-14,161;CL:0000837,6.61e-14,161;CL:0000163,6.12e-13,9 | |||
|ontology_enrichment_development_v019=CL:0000049;3.02e-07;108 | |ontology_enrichment_development_v019=CL:0000049;3.02e-07;108 | ||
|ontology_enrichment_disease=DOID:8692!7.67e-10!31;DOID:1240!7.87e-07!39 | |ontology_enrichment_disease=DOID:8692!7.67e-10!31;DOID:1240!7.87e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;8.26e-32;31!DOID:1240;1.36e-17;39!DOID:2531;3.34e-10;51!DOID:0060083;3.34e-10;51 | |ontology_enrichment_disease_v019=DOID:8692;8.26e-32;31!DOID:1240;1.36e-17;39!DOID:2531;3.34e-10;51!DOID:0060083;3.34e-10;51 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,3.83e-34,31;DOID:1240,2.38e-26,39;DOID:2531,2.97e-19,51;DOID:0060083,2.97e-19,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.06e-15!102;UBERON:0003061!2.06e-15!102;UBERON:0002193!1.30e-13!112;UBERON:0000178!2.09e-12!15;UBERON:0000179!2.09e-12!15;UBERON:0000463!2.09e-12!15;UBERON:0002371!1.22e-07!80;UBERON:0001474!3.01e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!2.06e-15!102;UBERON:0003061!2.06e-15!102;UBERON:0002193!1.30e-13!112;UBERON:0000178!2.09e-12!15;UBERON:0000179!2.09e-12!15;UBERON:0000463!2.09e-12!15;UBERON:0002371!1.22e-07!80;UBERON:0001474!3.01e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.10e-27;15!UBERON:0000179;6.10e-27;15!UBERON:0000463;6.10e-27;15!UBERON:0002390;8.61e-14;32!UBERON:0002193;4.87e-08;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;6.10e-27;15!UBERON:0000179;6.10e-27;15!UBERON:0000463;6.10e-27;15!UBERON:0002390;8.61e-14;32!UBERON:0002193;4.87e-08;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.04e-27,15;UBERON:0000179,7.04e-27,15;UBERON:0000463,7.04e-27,15;UBERON:0002390,1.14e-14,98;UBERON:0003061,1.14e-14,98;UBERON:0002193,7.03e-13,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,0.464448369948228,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0,0,0,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0.612167784741805,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.422510572623884,0.850417199860174,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0.39783335439818,0.365328307529268,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0.616804496998528,0.83593247695339,0,0,0,0.557052284425868,0.294605907474837,0.221533894583621,0,0.640456598628376,0.780356085359269,0.822189523018381,0.552700035571697,0.579606171470105,0.444859689486181,0.267540828089713,1.04535523804977,0.453237370790265,1.14966148080576,1.03088233644789,0.506039384039006,0,0.651083453856419,0.950452044448374,0,0.127986611154418,0,0.236777252044017,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.91195885475132,12.7670229319178,24.0500614027296,23.6356723603817,21.3349712490582,0,0,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0,0.197030760201927,0.431255149719035,0,0,0,0,0,0,1.49801404789436,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,1.50999940573032,0.106727557803444,0,1.66435439510497,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08890984861323,0,0,0,0,0,2.02979043692868,3.0585488285695,3.98753031021914,2.1440859791201,0.411362273086194,3.24236655596359,3.24018862342869,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01268954180134,3.38583555603207,12.3652817829849,10.0899853595524,17.0338495076131,0,12.2896305723383,9.8417487472663,8.00875880217161,0,11.6930593036002,2.46174797895425,22.9887326704586,34.9725566397711,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.179021174675609,43.995223839511,0.0986434056369336,7.18449277040819,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.692552326534174,0,0,0,0,0,0,0.533034776018635,0,1.56980256395025,0,0,0,0,0,5.56278026431325,0,0,0,0.216388639742091,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99396161812156,2.64793564700399,3.7671950208867,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,3.35481846026668,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.55251190893918,0,0,0.293104467356165,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0.3062454773532,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0.690359926060101,0,0.0752103283492573,0.20170506870352,0,0,0,0.147856086217045,0,0.781078098613847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,50.874478281969,0,0,0,0,0.235676547101626,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0.213233981900981,0,0.0645889098360061,0,0,0.25458863311266,0.202117188958219,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p5@LAT | |short_description=p5@LAT | ||
}} | }} |
Latest revision as of 01:52, 16 September 2015
Short description: | p5@LAT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAT_5end |
Coexpression cluster: | C3550_biphenotypic_small_acute_Mast_leukemia_blood_chronic |
Association with transcript: | -281bp_to_uc002dsb.2, uc002dsc.2, uc002dsd.2_5end |
EntrezGene: | LAT |
HGNC: | 18874 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.60e-23 | 5 |
basophil mast progenitor cell | 1.60e-23 | 5 |
myeloid cell | 7.35e-22 | 108 |
common myeloid progenitor | 7.35e-22 | 108 |
hematopoietic stem cell | 1.58e-15 | 168 |
hematopoietic cell | 2.10e-14 | 177 |
hematopoietic oligopotent progenitor cell | 6.61e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.61e-14 | 161 |
endocrine cell | 6.12e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
blood | 7.04e-27 | 15 |
haemolymphatic fluid | 7.04e-27 | 15 |
organism substance | 7.04e-27 | 15 |
hematopoietic system | 1.14e-14 | 98 |
blood island | 1.14e-14 | 98 |
hemolymphoid system | 7.03e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.83e-34 | 31 |
leukemia | 2.38e-26 | 39 |
hematologic cancer | 2.97e-19 | 51 |
immune system cancer | 2.97e-19 | 51 |