FFCP PHASE1:Hg19::chr13:21476900..21476918,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64328 | |EntrezGene=64328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17796 | |HGNC=17796 | ||
|TSSclassifier=strong | |||
|UniProt=F2Z2X4,F8W7D8,Q9C0E2 | |UniProt=F2Z2X4,F8W7D8,Q9C0E2 | ||
|association_with_transcript=0bp_to_ENST00000400602,ENST00000456108,NM_022459,uc001unq.3,uc010tcr.1_5end | |association_with_transcript=0bp_to_ENST00000400602,ENST00000456108,NM_022459,uc001unq.3,uc010tcr.1_5end | ||
|cluster_id=chr13:21476900..21476918,- | |||
|description=CAGE_peak_2_at_XPO4_5end | |description=CAGE_peak_2_at_XPO4_5end | ||
|id=chr13:21476900..21476918,- | |id=chr13:21476900..21476918,- | ||
|ontology_enrichment_celltype=CL:0000542!2.57e-16!53;CL:0000051!2.57e-16!53;CL:0000838!4.20e-16!52;CL:0000037!2.51e-11!172;CL:0000566!2.51e-11!172;CL:0000945!3.51e-11!24;CL:0000826!3.51e-11!24;CL:0000988!2.94e-10!182;CL:0002032!2.35e-09!165;CL:0000837!2.35e-09!165;CL:0000738!4.63e-09!140;CL:0000791!8.06e-09!18;CL:0000789!8.06e-09!18;CL:0002420!8.06e-09!18;CL:0002419!8.06e-09!18;CL:0000790!8.06e-09!18;CL:0002031!2.16e-08!124;CL:0002087!4.11e-08!119;CL:0000236!2.57e-07!14 | |ontology_enrichment_celltype=CL:0000542!2.57e-16!53;CL:0000051!2.57e-16!53;CL:0000838!4.20e-16!52;CL:0000037!2.51e-11!172;CL:0000566!2.51e-11!172;CL:0000945!3.51e-11!24;CL:0000826!3.51e-11!24;CL:0000988!2.94e-10!182;CL:0002032!2.35e-09!165;CL:0000837!2.35e-09!165;CL:0000738!4.63e-09!140;CL:0000791!8.06e-09!18;CL:0000789!8.06e-09!18;CL:0002420!8.06e-09!18;CL:0002419!8.06e-09!18;CL:0000790!8.06e-09!18;CL:0002031!2.16e-08!124;CL:0002087!4.11e-08!119;CL:0000236!2.57e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000945;5.20e-11;24!CL:0000542;2.15e-09;53!CL:0000791;5.05e-09;18!CL:0000789;5.05e-09;18!CL:0002419;5.05e-09;18 | |ontology_enrichment_celltype_v019=CL:0000945;5.20e-11;24!CL:0000542;2.15e-09;53!CL:0000791;5.05e-09;18!CL:0000789;5.05e-09;18!CL:0002419;5.05e-09;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.29e-16,53;CL:0000051,2.29e-16,53;CL:0000838,3.75e-16,52;CL:0000945,3.25e-11,24;CL:0000826,3.25e-11,24;CL:0000037,3.68e-11,168;CL:0000988,1.91e-10,177;CL:0002032,3.44e-09,161;CL:0000837,3.44e-09,161;CL:0000738,5.56e-09,136;CL:0000791,7.61e-09,18;CL:0000789,7.61e-09,18;CL:0002420,7.61e-09,18;CL:0002419,7.61e-09,18;CL:0000790,7.61e-09,18;CL:0002031,3.13e-08,120;CL:0002087,5.93e-08,115;CL:0000236,2.46e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.15e-09;53!CL:0000790;5.05e-09;18 | |ontology_enrichment_development_v019=CL:0000051;2.15e-09;53!CL:0000790;5.05e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@XPO4 | |short_description=p2@XPO4 | ||
}} | }} |
Latest revision as of 19:25, 16 September 2015
Short description: | p2@XPO4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XPO4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400602, ENST00000456108, NM_022459, uc001unq.3, uc010tcr.1_5end |
EntrezGene: | XPO4 |
HGNC: | 17796 |
UniProt: | F2Z2X4F8W7D8Q9C0E2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.29e-16 | 53 |
common lymphoid progenitor | 2.29e-16 | 53 |
lymphoid lineage restricted progenitor cell | 3.75e-16 | 52 |
lymphocyte of B lineage | 3.25e-11 | 24 |
pro-B cell | 3.25e-11 | 24 |
hematopoietic stem cell | 3.68e-11 | 168 |
hematopoietic cell | 1.91e-10 | 177 |
hematopoietic oligopotent progenitor cell | 3.44e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-09 | 161 |
leukocyte | 5.56e-09 | 136 |
mature alpha-beta T cell | 7.61e-09 | 18 |
alpha-beta T cell | 7.61e-09 | 18 |
immature T cell | 7.61e-09 | 18 |
mature T cell | 7.61e-09 | 18 |
immature alpha-beta T cell | 7.61e-09 | 18 |
hematopoietic lineage restricted progenitor cell | 3.13e-08 | 120 |
nongranular leukocyte | 5.93e-08 | 115 |
B cell | 2.46e-07 | 14 |