FFCP PHASE1:Hg19::chrY:10035766..10035786,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrY:10035766..10035786,+ | |||
|coexpression_cluster_id=C2030 | |coexpression_cluster_id=C2030 | ||
|description=CAGE_peak_at_chrY:10035766..10035786,+ | |description=CAGE_peak_at_chrY:10035766..10035786,+ | ||
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|ontology_enrichment_celltype=CL:0000183!7.52e-10!59;CL:0000222!2.12e-09!119;CL:0000187!6.29e-09!54;CL:0000680!2.50e-08!57;CL:0000056!2.50e-08!57;CL:0000355!2.50e-08!57;CL:0000192!2.71e-08!42;CL:0000514!2.71e-08!42;CL:0000393!2.75e-08!60;CL:0000211!2.75e-08!60;CL:0000220!9.22e-07!246 | |ontology_enrichment_celltype=CL:0000183!7.52e-10!59;CL:0000222!2.12e-09!119;CL:0000187!6.29e-09!54;CL:0000680!2.50e-08!57;CL:0000056!2.50e-08!57;CL:0000355!2.50e-08!57;CL:0000192!2.71e-08!42;CL:0000514!2.71e-08!42;CL:0000393!2.75e-08!60;CL:0000211!2.75e-08!60;CL:0000220!9.22e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0000359;4.57e-07;32!CL:0000192;6.82e-07;43 | |ontology_enrichment_celltype_v019=CL:0000359;4.57e-07;32!CL:0000192;6.82e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.77e-10,121;CL:0000187,8.10e-10,55;CL:0000680,2.84e-09,58;CL:0000056,2.84e-09,58;CL:0000355,2.84e-09,58;CL:0000393,3.23e-09,61;CL:0000211,3.23e-09,61;CL:0000192,3.98e-09,43;CL:0000514,3.98e-09,43;CL:0000359,2.70e-07,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.82e-07;43 | |ontology_enrichment_development_v019=CL:0000514;6.82e-07;43 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!7.66e-11!238;UBERON:0009142!7.66e-11!238;UBERON:0005256!1.81e-10!143;UBERON:0004535!2.54e-10!110;UBERON:0001009!6.95e-10!113;UBERON:0002385!1.20e-09!63;UBERON:0001015!1.20e-09!63;UBERON:0000383!1.20e-09!63;UBERON:0001134!1.28e-09!61;UBERON:0002036!1.28e-09!61;UBERON:0003082!1.28e-09!61;UBERON:0000490!3.60e-08!138;UBERON:0000486!3.64e-08!82;UBERON:0004290!5.59e-08!70;UBERON:0002049!3.07e-07!79;UBERON:0007798!3.07e-07!79;UBERON:0003914!3.21e-07!118;UBERON:0002100!8.94e-07!216 | |ontology_enrichment_uberon=UBERON:0003104!7.66e-11!238;UBERON:0009142!7.66e-11!238;UBERON:0005256!1.81e-10!143;UBERON:0004535!2.54e-10!110;UBERON:0001009!6.95e-10!113;UBERON:0002385!1.20e-09!63;UBERON:0001015!1.20e-09!63;UBERON:0000383!1.20e-09!63;UBERON:0001134!1.28e-09!61;UBERON:0002036!1.28e-09!61;UBERON:0003082!1.28e-09!61;UBERON:0000490!3.60e-08!138;UBERON:0000486!3.64e-08!82;UBERON:0004290!5.59e-08!70;UBERON:0002049!3.07e-07!79;UBERON:0007798!3.07e-07!79;UBERON:0003914!3.21e-07!118;UBERON:0002100!8.94e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.14e-11,109;UBERON:0003104,1.17e-11,160;UBERON:0009142,1.17e-11,160;UBERON:0005256,1.58e-11,122;UBERON:0001009,2.91e-11,112;UBERON:0002385,1.14e-10,64;UBERON:0001015,1.14e-10,64;UBERON:0000383,1.14e-10,64;UBERON:0001134,1.20e-10,62;UBERON:0002036,1.20e-10,62;UBERON:0003082,1.20e-10,62;UBERON:0007503,1.98e-10,78;UBERON:0002329,4.83e-09,71;UBERON:0003059,4.83e-09,71;UBERON:0007282,4.83e-09,71;UBERON:0004290,4.83e-09,71;UBERON:0009618,4.83e-09,71;UBERON:0000486,6.43e-09,83;UBERON:0003077,1.24e-08,72;UBERON:0007285,1.24e-08,72;UBERON:0002049,2.82e-08,78;UBERON:0007798,2.82e-08,78;UBERON:0007524,3.05e-08,73;UBERON:0002100,3.55e-08,199;UBERON:0000490,7.87e-08,148;UBERON:0003914,2.09e-07,117;UBERON:0001135,6.25e-07,15 | |||
|phase1_expression=0,0,0,0,4.91657203870017,24.4254786748103,0,0,0,2.7030733015166,10.4670175195864,2.18441372130172,5.01157258634062,6.18831764800233,5.63375538737457,26.893005858071,18.0808358407193,26.2911632539454,13.6621183661342,1.72369481307503,2.24400760368678,11.2843699732112,2.86235987131057,6.70684682857133,3.51519390865448,0,0,0,0,0.383829398097213,2.01260960310899,4.59710612239464,0,9.24385025416969,1.31694240986513,1.27952309238679,0,6.64794490238253,2.20598892217156,6.72733699219141,5.82180233023803,0,4.37878464978117,0,1.13362783106643,0,5.34586784883075,3.70051099219643,0,0,10.7587496742222,0,0,7.10033151942209,0,0,3.82068610080984,0,0,1.28371610830437,0,0,4.3882004676759,0,0,3.40431134814684,0,0,5.73631210262222,0,0,4.41933163185078,0,0.845021145247767,2.55125159958052,2.09658645508376,2.92054440980887,2.70318407114711,0.803627933485401,0,3.18266683518544,2.19196984517561,0,0.546138611262131,0,0,0.800791974072025,0,0,0,5.69212969109448,4.11066032559657,3.82273228125229,0,0,5.53106578027662,2.16380747125216,32.6198933081807,0,2.34061093546949,0,0,5.84480185223734,2.00538822393312,5.59751224202191,3.54454231333794,1.35401931882508,3.0741916734162,2.34106825607781,2.30213066445147,5.80335037350282,4.05724320029073,4.74517002118593,3.47803076516627,9.40819714244791,1.92625882585863,0,0,1.51811815211702,0,0,0,0,0,0,0.236777252044017,0,2.62088766192152,17.383612725928,5.21367853978076,60.9517165784904,6.70700859703636,1.53435074212236,2.1686349143074,13.0347856765331,11.4428749979051,4.7717156823066,37.470885013303,2.45790524626576,12.4168462579036,4.21606971327005,1.11332214173056,2.91436230634034,8.52804218404188,0,0,11.833258486179,0,0,0,4.37277296206751,0,0,18.0898541415683,0,12.105193845363,10.2407533603037,2.58416759169329,1.77883131343355,3.3472061276467,0,0,0,0,15.3926970097534,1.69669483739752,0.673588117878509,0.788280363383256,21.4643292452237,9.49265659568129,0,0,0,3.05265836499774,0,0,0,0,0,15.1382952038423,0,0,1.24484414159907,1.34710672069688,2.45192854670188,3.32986340818849,2.88087962239999,2.10889288650417,2.49728061464256,0,0,1.40921398372518,1.29498355494505,1.96631129383148,2.24569588380383,3.80786383666481,2.37649296704261,2.37600571456411,12.857880322485,2.73048408581408,11.4978902690598,1.68336113954066,1.12606667884768,0,0,8.88814607817157,4.20666564938471,6.12533789064114,0,0,1.48352330811693,2.70081986475962,0.412210116953756,2.31876486041066,2.04728541964749,1.68776332241266,0.779496041289589,2.52433774244115,2.02509777013059,1.2931684545505,3.19508633264953,0.906768884048762,1.52604533079439,0,0,2.58124135850103,0,0,0,0,0,0,20.3384392028761,0,0,4.17931135228781,6.49691533502627,4.37735160147422,3.03452442140583,1.68707720918437,3.639701100169,5.01122721412534,4.03360052488864,4.44943316928543,5.88664395376038,2.69323009862473,2.21446636387394,5.60967095213783,3.7041661019826,8.82052268313252,25.3510069643662,13.7595810334868,8.27105869353966,7.94633578946371,1.47586126251736,2.40194934417936,1.64625428112938,0,0,0.925884451585296,1.62904152655162,1.03993478527958,1.44331342025273,1.04337364477569,1.29149563659404,2.45422961193825,23.1492756288305,10.4639783729029,0,0,4.18568910348575,1.8720341211139,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0.444485260045183,11.0776643411901,43.3704554677174,35.9252136647681,3.496134751913,6.60754727256618,1.71495859578347,0.897048674762886,0.87192013766656,0.95339771567235,0,57.2250313363012,24.513779824124,0,0,3.60090323966999,5.67396528093113,3.19706614819319,1.14382394926518,7.5967024754802,11.5253647149308,4.23457039581856,4.6200953336531,4.75171123760058,0,0,0,7.29742683847143,3.01354254859276,69.5752000294004,0,0,0,0,14.1778662559765,0,0,3.74358444383662,6.68445482064504,5.64709359630893,0.76228387266739,0,2.31986643833309,2.51274398001523,1.91381625495949,23.9682247663098,65.8155210248855,0,0.613457458595699,4.50153468953709,2.98391526069709,1.66376689224646,0,1.57702415033935,2.10854546986884,0,77.3185513790349,34.1461135265266,1.99267679560631,0,2.25897397617015,3.91602314925481,6.51972505240626,1.24060815673732,6.03999762292127,3.52200940751366,7.27506171471023,0,11.7932214398575,0,0,0,0,0,9.49038134747284,0,0,0,0,2.59627214591811,0,4.3509401852984,17.4440629163858,3.13075362382048,4.24813458209045,6.55528204824181,8.78533580228142,2.25599806453706,1.46329140498388,3.92174884588428,7.30696123266303,1.47772280450026,1.13733384070897,3.40187410553031,4.53423423814493,53.9795384416013,1.35473218771926,12.5422443463713,1.78413391131527,4.15538004464362,6.94011739638753,1.09629938322967,5.22870902049801,1.79515087581472,1.64007322849853,1.95227036798582,2.36994326789761,0,0,2.29706215198469,20.8019278731687,4.82051789532479,3.28680442193215,2.7728751080636,3.22357716924872,1.51620229732984,3.33002759091648,3.91545073568417,2.98293195956353,1.4245125703478,0,4.99694175149276,1.78657797492418,5.15904682363305,13.4805209296213,1.88887408098384,18.8200062943362,9.24100740528266,5.32306030317022,10.4391959049009,7.04232032594896,2.862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|phase1_expression=0,0,0,0,4.91657203870017,24.4254786748103,0,0,0,2.7030733015166,10.4670175195864,2.18441372130172,5.01157258634062,6.18831764800233,5.63375538737457,26.893005858071,18.0808358407193,26.2911632539454,13.6621183661342,1.72369481307503,2.24400760368678,11.2843699732112,2.86235987131057,6.70684682857133,3.51519390865448,0,0,0,0,0.383829398097213,2.01260960310899,4.59710612239464,0,9.24385025416969,1.31694240986513,1.27952309238679,0,6.64794490238253,2.20598892217156,6.72733699219141,5.82180233023803,0,4.37878464978117,0,1.13362783106643,0,5.34586784883075,3.70051099219643,0,0,10.7587496742222,0,0,7.10033151942209,0,0,3.82068610080984,0,0,1.28371610830437,0,0,4.3882004676759,0,0,3.40431134814684,0,0,5.73631210262222,0,0,4.41933163185078,0,0.845021145247767,2.55125159958052,2.09658645508376,2.92054440980887,2.70318407114711,0.803627933485401,0,3.18266683518544,2.19196984517561,0,0.546138611262131,0,0,0.800791974072025,0,0,0,5.69212969109448,4.11066032559657,3.82273228125229,0,0,5.53106578027662,2.16380747125216,32.6198933081807,0,2.34061093546949,0,0,5.84480185223734,2.00538822393312,5.59751224202191,3.54454231333794,1.35401931882508,3.0741916734162,2.34106825607781,2.30213066445147,5.80335037350282,4.05724320029073,4.74517002118593,3.47803076516627,9.40819714244791,1.92625882585863,0,0,1.51811815211702,0,0,0,0,0,0,0.236777252044017,0,2.62088766192152,17.383612725928,5.21367853978076,60.9517165784904,6.70700859703636,1.53435074212236,2.1686349143074,13.0347856765331,11.4428749979051,4.7717156823066,37.470885013303,2.45790524626576,12.4168462579036,4.21606971327005,1.11332214173056,2.91436230634034,8.52804218404188,0,0,11.833258486179,0,0,0,4.37277296206751,0,0,18.0898541415683,0,12.105193845363,10.2407533603037,2.58416759169329,1.77883131343355,3.3472061276467,0,0,0,0,15.3926970097534,1.69669483739752,0.673588117878509,0.788280363383256,21.4643292452237,9.49265659568129,0,0,0,3.05265836499774,0,0,0,0,0,15.1382952038423,0,0,1.24484414159907,1.34710672069688,2.45192854670188,3.32986340818849,2.88087962239999,2.10889288650417,2.49728061464256,0,0,1.40921398372518,1.29498355494505,1.96631129383148,2.24569588380383,3.80786383666481,2.37649296704261,2.37600571456411,12.857880322485,2.73048408581408,11.4978902690598,1.68336113954066,1.12606667884768,0,0,8.88814607817157,4.20666564938471,6.12533789064114,0,0,1.48352330811693,2.70081986475962,0.412210116953756,2.31876486041066,2.04728541964749,1.68776332241266,0.779496041289589,2.52433774244115,2.02509777013059,1.2931684545505,3.19508633264953,0.906768884048762,1.52604533079439,0,0,2.58124135850103,0,0,0,0,0,0,20.3384392028761,0,0,4.17931135228781,6.49691533502627,4.37735160147422,3.03452442140583,1.68707720918437,3.639701100169,5.01122721412534,4.03360052488864,4.44943316928543,5.88664395376038,2.69323009862473,2.21446636387394,5.60967095213783,3.7041661019826,8.82052268313252,25.3510069643662,13.7595810334868,8.27105869353966,7.94633578946371,1.47586126251736,2.40194934417936,1.64625428112938,0,0,0.925884451585296,1.62904152655162,1.03993478527958,1.44331342025273,1.04337364477569,1.29149563659404,2.45422961193825,23.1492756288305,10.4639783729029,0,0,4.18568910348575,1.8720341211139,0,0,0,0.567100388969546,0,0,0,0,0,0,0,0,0.444485260045183,11.0776643411901,43.3704554677174,35.9252136647681,3.496134751913,6.60754727256618,1.71495859578347,0.897048674762886,0.87192013766656,0.95339771567235,0,57.2250313363012,24.513779824124,0,0,3.60090323966999,5.67396528093113,3.19706614819319,1.14382394926518,7.5967024754802,11.5253647149308,4.23457039581856,4.6200953336531,4.75171123760058,0,0,0,7.29742683847143,3.01354254859276,69.5752000294004,0,0,0,0,14.1778662559765,0,0,3.74358444383662,6.68445482064504,5.64709359630893,0.76228387266739,0,2.31986643833309,2.51274398001523,1.91381625495949,23.9682247663098,65.8155210248855,0,0.613457458595699,4.50153468953709,2.98391526069709,1.66376689224646,0,1.57702415033935,2.10854546986884,0,77.3185513790349,34.1461135265266,1.99267679560631,0,2.25897397617015,3.91602314925481,6.51972505240626,1.24060815673732,6.03999762292127,3.52200940751366,7.27506171471023,0,11.7932214398575,0,0,0,0,0,9.49038134747284,0,0,0,0,2.59627214591811,0,4.3509401852984,17.4440629163858,3.13075362382048,4.24813458209045,6.55528204824181,8.78533580228142,2.25599806453706,1.46329140498388,3.92174884588428,7.30696123266303,1.47772280450026,1.13733384070897,3.40187410553031,4.53423423814493,53.9795384416013,1.35473218771926,12.5422443463713,1.78413391131527,4.15538004464362,6.94011739638753,1.09629938322967,5.22870902049801,1.79515087581472,1.64007322849853,1.95227036798582,2.36994326789761,0,0,2.29706215198469,20.8019278731687,4.82051789532479,3.28680442193215,2.7728751080636,3.22357716924872,1.51620229732984,3.33002759091648,3.91545073568417,2.98293195956353,1.4245125703478,0,4.99694175149276,1.78657797492418,5.15904682363305,13.4805209296213,1.88887408098384,18.8200062943362,9.24100740528266,5.32306030317022,10.4391959049009,7.04232032594896,2.862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| ||
|short_description=p@chrY:10035766..10035786,+ | |short_description=p@chrY:10035766..10035786,+ | ||
}} | }} |
Latest revision as of 09:59, 1 August 2015
Short description: | p@chrY:10035766..10035786, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrY:10035766..10035786, + |
Coexpression cluster: | C2030_Neutrophils_Monocytederived_Smooth_CD4_penis_seminal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.77e-10 | 121 |
muscle cell | 8.10e-10 | 55 |
muscle precursor cell | 2.84e-09 | 58 |
myoblast | 2.84e-09 | 58 |
multi-potent skeletal muscle stem cell | 2.84e-09 | 58 |
electrically responsive cell | 3.23e-09 | 61 |
electrically active cell | 3.23e-09 | 61 |
smooth muscle cell | 3.98e-09 | 43 |
smooth muscle myoblast | 3.98e-09 | 43 |
vascular associated smooth muscle cell | 2.70e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.14e-11 | 109 |
mesenchyme | 1.17e-11 | 160 |
entire embryonic mesenchyme | 1.17e-11 | 160 |
trunk mesenchyme | 1.58e-11 | 122 |
circulatory system | 2.91e-11 | 112 |
muscle tissue | 1.14e-10 | 64 |
musculature | 1.14e-10 | 64 |
musculature of body | 1.14e-10 | 64 |
skeletal muscle tissue | 1.20e-10 | 62 |
striated muscle tissue | 1.20e-10 | 62 |
myotome | 1.20e-10 | 62 |
epithelial vesicle | 1.98e-10 | 78 |
somite | 4.83e-09 | 71 |
presomitic mesoderm | 4.83e-09 | 71 |
presumptive segmental plate | 4.83e-09 | 71 |
dermomyotome | 4.83e-09 | 71 |
trunk paraxial mesoderm | 4.83e-09 | 71 |
multilaminar epithelium | 6.43e-09 | 83 |
paraxial mesoderm | 1.24e-08 | 72 |
presumptive paraxial mesoderm | 1.24e-08 | 72 |
vasculature | 2.82e-08 | 78 |
vascular system | 2.82e-08 | 78 |
dense mesenchyme tissue | 3.05e-08 | 73 |
trunk | 3.55e-08 | 199 |
unilaminar epithelium | 7.87e-08 | 148 |
epithelial tube | 2.09e-07 | 117 |
smooth muscle tissue | 6.25e-07 | 15 |