FFCP PHASE1:Hg19::chr5:119740561..119740564,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-29bp_to_BC011941_5end | |association_with_transcript=-29bp_to_BC011941_5end | ||
|cluster_id=chr5:119740561..119740564,- | |||
|coexpression_cluster_id=C2732 | |coexpression_cluster_id=C2732 | ||
|description=CAGE_peak_1_at_BC011941_5end | |description=CAGE_peak_1_at_BC011941_5end | ||
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|ontology_enrichment_celltype=CL:0002194!4.63e-13!63;CL:0000576!4.63e-13!63;CL:0000040!4.63e-13!63;CL:0000559!4.63e-13!63;CL:0002009!1.88e-12!65;CL:0002057!3.93e-11!42;CL:0000839!4.30e-11!70;CL:0000557!7.62e-11!71;CL:0000188!1.41e-10!9;CL:0000048!2.33e-10!430;CL:0000860!4.55e-10!45;CL:0000723!6.01e-10!436;CL:0000034!6.67e-10!444;CL:0000766!1.04e-09!76;CL:0000148!3.56e-09!10;CL:0000541!3.56e-09!10;CL:0000710!4.84e-08!20;CL:0000219!5.69e-08!390;CL:0002371!1.15e-07!591 | |ontology_enrichment_celltype=CL:0002194!4.63e-13!63;CL:0000576!4.63e-13!63;CL:0000040!4.63e-13!63;CL:0000559!4.63e-13!63;CL:0002009!1.88e-12!65;CL:0002057!3.93e-11!42;CL:0000839!4.30e-11!70;CL:0000557!7.62e-11!71;CL:0000188!1.41e-10!9;CL:0000048!2.33e-10!430;CL:0000860!4.55e-10!45;CL:0000723!6.01e-10!436;CL:0000034!6.67e-10!444;CL:0000766!1.04e-09!76;CL:0000148!3.56e-09!10;CL:0000541!3.56e-09!10;CL:0000710!4.84e-08!20;CL:0000219!5.69e-08!390;CL:0002371!1.15e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.79e-20;39!CL:0000234;1.79e-20;39!CL:0000235;5.66e-17;6!CL:0000860;1.67e-12;33!CL:0002057;1.67e-12;33!CL:0000148;1.79e-10;10!CL:0002567;2.93e-09;3!CL:0000222;4.27e-08;1!CL:0000766;6.80e-08;69!CL:0000147;1.66e-07;14!CL:0000228;2.10e-07;1!CL:0002372;2.10e-07;1!CL:0002591;2.10e-07;1 | |ontology_enrichment_celltype_v019=CL:0000473;1.79e-20;39!CL:0000234;1.79e-20;39!CL:0000235;5.66e-17;6!CL:0000860;1.67e-12;33!CL:0002057;1.67e-12;33!CL:0000148;1.79e-10;10!CL:0002567;2.93e-09;3!CL:0000222;4.27e-08;1!CL:0000766;6.80e-08;69!CL:0000147;1.66e-07;14!CL:0000228;2.10e-07;1!CL:0002372;2.10e-07;1!CL:0002591;2.10e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.62e-19,48;CL:0000234,1.62e-19,48;CL:0000235,6.55e-17,6;CL:0002194,4.16e-15,59;CL:0000576,4.16e-15,59;CL:0000040,4.16e-15,59;CL:0000559,4.16e-15,59;CL:0002009,1.54e-14,61;CL:0000839,2.90e-13,66;CL:0000557,4.94e-13,67;CL:0000766,5.74e-12,72;CL:0000860,1.07e-10,42;CL:0002057,1.07e-10,42;CL:0000148,2.00e-10,10;CL:0000541,2.00e-10,10;CL:0002567,3.69e-09,3;CL:0000147,1.80e-07,14;CL:0000228,1.91e-07,1;CL:0002372,1.91e-07,1;CL:0002591,2.98e-07,1;CL:0000763,3.35e-07,108;CL:0000049,3.35e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.55e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.55e-08;42 | ||
|ontology_enrichment_disease=DOID:2394!2.71e-12!14 | |ontology_enrichment_disease=DOID:2394!2.71e-12!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!5.84e-09!167;UBERON:0002371!6.59e-09!80;UBERON:0002119!2.18e-08!4;UBERON:0004531!2.18e-08!4;UBERON:0001474!7.41e-08!86 | |ontology_enrichment_uberon=UBERON:0002204!5.84e-09!167;UBERON:0002371!6.59e-09!80;UBERON:0002119!2.18e-08!4;UBERON:0004531!2.18e-08!4;UBERON:0001474!7.41e-08!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.24e-11,76;UBERON:0001474,3.18e-10,82;UBERON:0004765,4.15e-09,90;UBERON:0002405,9.72e-09,93;UBERON:0002204,2.43e-08,167;UBERON:0002390,3.57e-08,98;UBERON:0003061,3.57e-08,98;UBERON:0001434,5.79e-08,100;UBERON:0002193,3.35e-07,108 | |||
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| ||
|short_description=p1@BC011941 | |short_description=p1@BC011941 | ||
}} | }} |
Latest revision as of 09:05, 30 July 2015
Short description: | p1@BC011941 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC011941_5end |
Coexpression cluster: | C2732_mesodermal_gastrointestinal_Melanocyte_CD14_mesenchymal_basal_Monocytederived |
Association with transcript: | -29bp_to_BC011941_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.62e-19 | 48 |
phagocyte | 1.62e-19 | 48 |
macrophage | 6.55e-17 | 6 |
monopoietic cell | 4.16e-15 | 59 |
monocyte | 4.16e-15 | 59 |
monoblast | 4.16e-15 | 59 |
promonocyte | 4.16e-15 | 59 |
macrophage dendritic cell progenitor | 1.54e-14 | 61 |
myeloid lineage restricted progenitor cell | 2.90e-13 | 66 |
granulocyte monocyte progenitor cell | 4.94e-13 | 67 |
myeloid leukocyte | 5.74e-12 | 72 |
classical monocyte | 1.07e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-10 | 42 |
melanocyte | 2.00e-10 | 10 |
melanoblast | 2.00e-10 | 10 |
light melanocyte | 3.69e-09 | 3 |
pigment cell | 1.80e-07 | 14 |
multinucleate cell | 1.91e-07 | 1 |
myotube | 1.91e-07 | 1 |
smooth muscle cell of the pulmonary artery | 2.98e-07 | 1 |
myeloid cell | 3.35e-07 | 108 |
common myeloid progenitor | 3.35e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.24e-11 | 76 |
bone element | 3.18e-10 | 82 |
skeletal element | 4.15e-09 | 90 |
immune system | 9.72e-09 | 93 |
musculoskeletal system | 2.43e-08 | 167 |
hematopoietic system | 3.57e-08 | 98 |
blood island | 3.57e-08 | 98 |
skeletal system | 5.79e-08 | 100 |
hemolymphoid system | 3.35e-07 | 108 |