FFCP PHASE1:Hg19::chr1:115572444..115572451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7252 | |EntrezGene=7252 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12372 | |HGNC=12372 | ||
|TSSclassifier=strong | |||
|UniProt=P01222 | |UniProt=P01222 | ||
|association_with_transcript=29bp_to_ENST00000256592,NM_000549,uc001efs.1_5end | |association_with_transcript=29bp_to_ENST00000256592,NM_000549,uc001efs.1_5end | ||
|cluster_id=chr1:115572444..115572451,+ | |||
|coexpression_cluster_id=C155 | |coexpression_cluster_id=C155 | ||
|description=CAGE_peak_1_at_TSHB_5end | |description=CAGE_peak_1_at_TSHB_5end | ||
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|ontology_enrichment_celltype=CL:0000346!8.17e-11!3;CL:1000428!8.17e-11!3;CL:0002559!1.96e-08!4;CL:0002563!2.43e-08!4 | |ontology_enrichment_celltype=CL:0000346!8.17e-11!3;CL:1000428!8.17e-11!3;CL:0002559!1.96e-08!4;CL:0002563!2.43e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0000346;4.09e-23;3!CL:1000428;4.09e-23;3!CL:0002559;1.83e-14;5 | |ontology_enrichment_celltype_v019=CL:0000346;4.09e-23;3!CL:1000428;4.09e-23;3!CL:0002559;1.83e-14;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,4.09e-23,3;CL:1000428,4.09e-23,3;CL:0002559,1.83e-14,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000007!1.13e-57!2;UBERON:0001896!3.86e-38!3;UBERON:0005290!3.86e-38!3;UBERON:0010096!3.86e-38!3;UBERON:0001894!3.85e-37!7;UBERON:0006222!3.85e-37!7;UBERON:0003296!1.78e-29!4;UBERON:0010133!1.78e-29!4;UBERON:0001897!1.78e-15!2;UBERON:0002298!5.04e-15!8;UBERON:0001049!1.49e-12!57;UBERON:0005068!1.49e-12!57;UBERON:0006241!1.49e-12!57;UBERON:0007135!1.49e-12!57;UBERON:0002616!3.80e-12!59;UBERON:0000412!8.17e-11!3;UBERON:0001992!8.17e-11!3;UBERON:0004733!2.34e-10!12;UBERON:0002028!2.34e-10!12;UBERON:0007277!2.34e-10!12;UBERON:0000955!2.58e-10!69;UBERON:0006238!2.58e-10!69;UBERON:0004732!1.24e-09!13;UBERON:0001017!9.19e-09!82;UBERON:0003076!1.78e-08!15;UBERON:0003057!1.78e-08!15;UBERON:0003075!1.81e-08!86;UBERON:0007284!1.81e-08!86;UBERON:0002073!1.96e-08!4;UBERON:0005086!1.96e-08!4;UBERON:0005743!2.24e-08!86;UBERON:0001242!2.43e-08!4;UBERON:0001262!2.43e-08!4;UBERON:0004786!2.43e-08!4;UBERON:0004808!2.43e-08!4;UBERON:0001277!2.43e-08!4;UBERON:0002346!4.15e-08!90;UBERON:0000073!1.27e-07!94;UBERON:0001016!1.27e-07!94;UBERON:0003350!6.39e-07!5;UBERON:0002780!8.36e-07!41;UBERON:0001890!8.36e-07!41;UBERON:0006240!8.36e-07!41 | |ontology_enrichment_uberon=UBERON:0000007!1.13e-57!2;UBERON:0001896!3.86e-38!3;UBERON:0005290!3.86e-38!3;UBERON:0010096!3.86e-38!3;UBERON:0001894!3.85e-37!7;UBERON:0006222!3.85e-37!7;UBERON:0003296!1.78e-29!4;UBERON:0010133!1.78e-29!4;UBERON:0001897!1.78e-15!2;UBERON:0002298!5.04e-15!8;UBERON:0001049!1.49e-12!57;UBERON:0005068!1.49e-12!57;UBERON:0006241!1.49e-12!57;UBERON:0007135!1.49e-12!57;UBERON:0002616!3.80e-12!59;UBERON:0000412!8.17e-11!3;UBERON:0001992!8.17e-11!3;UBERON:0004733!2.34e-10!12;UBERON:0002028!2.34e-10!12;UBERON:0007277!2.34e-10!12;UBERON:0000955!2.58e-10!69;UBERON:0006238!2.58e-10!69;UBERON:0004732!1.24e-09!13;UBERON:0001017!9.19e-09!82;UBERON:0003076!1.78e-08!15;UBERON:0003057!1.78e-08!15;UBERON:0003075!1.81e-08!86;UBERON:0007284!1.81e-08!86;UBERON:0002073!1.96e-08!4;UBERON:0005086!1.96e-08!4;UBERON:0005743!2.24e-08!86;UBERON:0001242!2.43e-08!4;UBERON:0001262!2.43e-08!4;UBERON:0004786!2.43e-08!4;UBERON:0004808!2.43e-08!4;UBERON:0001277!2.43e-08!4;UBERON:0002346!4.15e-08!90;UBERON:0000073!1.27e-07!94;UBERON:0001016!1.27e-07!94;UBERON:0003350!6.39e-07!5;UBERON:0002780!8.36e-07!41;UBERON:0001890!8.36e-07!41;UBERON:0006240!8.36e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000412;4.09e-23;3!UBERON:0001992;4.09e-23;3!UBERON:0002073;1.83e-14;5!UBERON:0002368;1.21e-08;33!UBERON:0002067;1.21e-08;9!UBERON:0002780;4.33e-07;41!UBERON:0001890;4.33e-07;41 | |ontology_enrichment_uberon_v019=UBERON:0000007;4.61e-131;2!UBERON:0003296;2.40e-66;4!UBERON:0010133;2.40e-66;4!UBERON:0001894;1.49e-38;7!UBERON:0000412;4.09e-23;3!UBERON:0001992;4.09e-23;3!UBERON:0002073;1.83e-14;5!UBERON:0002368;1.21e-08;33!UBERON:0002067;1.21e-08;9!UBERON:0002780;4.33e-07;41!UBERON:0001890;4.33e-07;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,4.61e-131,2;UBERON:0003296,2.40e-66,4;UBERON:0010133,2.40e-66,4;UBERON:0001894,1.49e-38,7;UBERON:0006222,1.49e-38,7;UBERON:0000412,4.09e-23,3;UBERON:0001992,4.09e-23,3;UBERON:0002073,1.83e-14,5;UBERON:0005086,1.83e-14,5;UBERON:0002368,1.09e-08,35;UBERON:0002067,1.21e-08,9;UBERON:0004016,1.21e-08,9;UBERON:0010083,1.21e-08,9;UBERON:0002780,2.04e-07,41;UBERON:0001890,2.04e-07,41;UBERON:0003080,2.04e-07,41;UBERON:0006240,2.04e-07,41;UBERON:0000949,5.42e-07,45 | |||
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|short_description=p1@TSHB | |short_description=p1@TSHB | ||
}} | }} |
Latest revision as of 07:40, 16 September 2015
Short description: | p1@TSHB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TSHB_5end |
Coexpression cluster: | C155_pituitary_placenta_nonsmall_cervical_smallcell_choriocarcinoma_epitheloid |
Association with transcript: | 29bp_to_ENST00000256592, NM_000549, uc001efs.1_5end |
EntrezGene: | TSHB |
HGNC: | 12372 |
UniProt: | P01222 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 4.09e-23 | 3 |
stem cell of epidermis | 4.09e-23 | 3 |
hair follicle cell | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 4.61e-131 | 2 |
gland of diencephalon | 2.40e-66 | 4 |
neuroendocrine gland | 2.40e-66 | 4 |
diencephalon | 1.49e-38 | 7 |
future diencephalon | 1.49e-38 | 7 |
dermal papilla | 4.09e-23 | 3 |
papillary layer of dermis | 4.09e-23 | 3 |
hair follicle | 1.83e-14 | 5 |
hair follicle placode | 1.83e-14 | 5 |
endocrine gland | 1.09e-08 | 35 |
dermis | 1.21e-08 | 9 |
dermatome | 1.21e-08 | 9 |
future dermis | 1.21e-08 | 9 |
regional part of forebrain | 2.04e-07 | 41 |
forebrain | 2.04e-07 | 41 |
anterior neural tube | 2.04e-07 | 41 |
future forebrain | 2.04e-07 | 41 |
endocrine system | 5.42e-07 | 45 |