FFCP PHASE1:Hg19::chr20:61427629..61427650,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:61427629..61427650,- | |||
|description=CAGE_peak_at_chr20:61427629..61427650,- | |description=CAGE_peak_at_chr20:61427629..61427650,- | ||
|id=chr20:61427629..61427650,- | |id=chr20:61427629..61427650,- | ||
|ontology_enrichment_celltype=CL:0000988!4.66e-33!182;CL:0000037!5.16e-33!172;CL:0000566!5.16e-33!172;CL:0002032!1.02e-31!165;CL:0000837!1.02e-31!165;CL:0000738!3.28e-30!140;CL:0002031!6.46e-25!124;CL:0002087!3.69e-23!119;CL:0000763!2.00e-17!112;CL:0000049!2.00e-17!112;CL:0000766!7.22e-14!76;CL:0000542!9.52e-14!53;CL:0000051!9.52e-14!53;CL:0000838!2.43e-13!52;CL:0000860!4.07e-12!45;CL:0000557!1.46e-11!71;CL:0002009!6.89e-11!65;CL:0000839!1.10e-10!70;CL:0000945!1.12e-10!24;CL:0000826!1.12e-10!24;CL:0002057!2.54e-10!42;CL:0002393!8.28e-10!9;CL:0002397!8.28e-10!9;CL:0002194!1.29e-09!63;CL:0000576!1.29e-09!63;CL:0000040!1.29e-09!63;CL:0000559!1.29e-09!63;CL:0000063!6.72e-08!578;CL:0000134!8.13e-08!358;CL:0000219!1.84e-07!390;CL:0002320!3.83e-07!365 | |ontology_enrichment_celltype=CL:0000988!4.66e-33!182;CL:0000037!5.16e-33!172;CL:0000566!5.16e-33!172;CL:0002032!1.02e-31!165;CL:0000837!1.02e-31!165;CL:0000738!3.28e-30!140;CL:0002031!6.46e-25!124;CL:0002087!3.69e-23!119;CL:0000763!2.00e-17!112;CL:0000049!2.00e-17!112;CL:0000766!7.22e-14!76;CL:0000542!9.52e-14!53;CL:0000051!9.52e-14!53;CL:0000838!2.43e-13!52;CL:0000860!4.07e-12!45;CL:0000557!1.46e-11!71;CL:0002009!6.89e-11!65;CL:0000839!1.10e-10!70;CL:0000945!1.12e-10!24;CL:0000826!1.12e-10!24;CL:0002057!2.54e-10!42;CL:0002393!8.28e-10!9;CL:0002397!8.28e-10!9;CL:0002194!1.29e-09!63;CL:0000576!1.29e-09!63;CL:0000040!1.29e-09!63;CL:0000559!1.29e-09!63;CL:0000063!6.72e-08!578;CL:0000134!8.13e-08!358;CL:0000219!1.84e-07!390;CL:0002320!3.83e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000094;2.07e-12;8!CL:0002127;7.33e-12;1!CL:0000911;7.33e-12;1!CL:0000814;7.33e-12;1!CL:0000081;3.57e-09;11 | |ontology_enrichment_celltype_v019=CL:0000094;2.07e-12;8!CL:0002127;7.33e-12;1!CL:0000911;7.33e-12;1!CL:0000814;7.33e-12;1!CL:0000081;3.57e-09;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.73e-13,136;CL:0000094,2.04e-12,8;CL:0000037,1.13e-11,168;CL:0002127,1.32e-11,1;CL:0000914,1.32e-11,1;CL:0000911,1.32e-11,1;CL:0000814,1.32e-11,1;CL:0002042,1.32e-11,1;CL:0002039,1.32e-11,1;CL:0002040,1.32e-11,1;CL:0002041,1.32e-11,1;CL:0000988,5.71e-11,177;CL:0002032,1.61e-10,161;CL:0000837,1.61e-10,161;CL:0000081,3.53e-09,11;CL:0002031,3.29e-07,120 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!4.47e-09!235;DOID:14566!1.99e-08!239;DOID:2531!8.25e-08!51;DOID:0060083!8.25e-08!51;DOID:305!5.90e-07!106 | |ontology_enrichment_disease=DOID:162!4.47e-09!235;DOID:14566!1.99e-08!239;DOID:2531!8.25e-08!51;DOID:0060083!8.25e-08!51;DOID:305!5.90e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.18e-13!102;UBERON:0003061!3.18e-13!102;UBERON:0002193!2.48e-11!112;UBERON:0002371!2.13e-10!80;UBERON:0001474!1.55e-09!86;UBERON:0002405!7.70e-09!115;UBERON:0001737!2.99e-07!9 | |ontology_enrichment_uberon=UBERON:0002390!3.18e-13!102;UBERON:0003061!3.18e-13!102;UBERON:0002193!2.48e-11!112;UBERON:0002371!2.13e-10!80;UBERON:0001474!1.55e-09!86;UBERON:0002405!7.70e-09!115;UBERON:0001737!2.99e-07!9 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-11,4;UBERON:0005058,1.55e-11,4;UBERON:0009113,1.55e-11,4;UBERON:0003295,1.55e-11,4;UBERON:0005562,1.55e-11,4;UBERON:0003351,5.55e-08,6;UBERON:0004177,5.84e-07,7;UBERON:0005057,5.84e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61130724598361,0.328402357799783,0.314843125254717,1.18009283054671,0.767658796194425,0.619264493264304,0,0,0,1.39440961044543,0.568676929949686,0.293600439334847,1.10799081706375,0.601633342410425,0.651032612147555,0.223915474239924,0,0,0.436194716338694,0,0,0.232429036905685,0,0.929119112685311,0.28769239232215,0,0.945928919554341,0.689491361473237,0,1.35426486594342,0.188242339542605,0,0.898893937780338,0.918251677112708,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.845021145247767,0.637812899895131,0.209658645508376,0.44931452458598,0.150176892841506,0,1.42506371870624,0.99458338599545,0.547992461293902,0,0,0.889509253863555,1.28019066769952,0.400395987036012,0,0.661044872784862,0,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.590129310341499,0,0.205601498999509,0.167186495390678,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0.130059347559878,0,0,0,0.741432815810302,0,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0.950452044448374,0,0,1.24930726552346,0,0,1.00803371612366,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.591534000199219,0.505754070234305,0,0.55146986366197,0.871517776369625,0.474541238222193,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,1.32438929824395,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0.462985512576611,0,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0,0,1.03664057770386,0.288239906833923,0.50496973370552,0,0,0,0,0.205654985406647,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12085143993527,0.591092280605782,0.862510299438069,0.256686072559497,0.254094624222463,0,0.773288812777695,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0,0.399158742865633,0.191505370132367,1.2700414963433,0.324621940274555,0,0.456469358066384,0.313359791546046,0,0,0.321176150207399,0.403599414382095,0,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0.780103689942349,0.284136146806413,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0.369254416383208,0,0.179736702294654,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0.344743373241465,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.31396051279005,0,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0.296521128680622,0.370691816839509,0.417687798021821,0,0,0,0.547364367646998,0,0.242780379534093,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,0.967563312890852,0.511625219603299,0.164230914106418,0,0,0.225980740780532,0.137041924646751,0.19871461170299,0,0.195551382734803,0,0,0,0,0,0.171594997861965,0.14405479798815,0.124252535565433,0,0,0,0,0,0,0.273810757783986,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0,0,0,0.393915911536118,0.329663433524666,0.539228350833479,0.295282444544246,0.423366660328922,0,0,0,0,0,0.674921674654501,1.5476039091159,0.0607495566580247,0,0,0.0524545881349981,0,0,0.383830394638891,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0.171086837884329,0,0,0.314408610199332,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0.303298235083296,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.353378291891762,0,0.337884881306145,0,0.345430341731199,0,0,0.194860308839388,0,0.163565394255844,0,0,0,0,0.533458648470704,0.516644938982447,0,0,0,0,0.255788742607303,0,0.157265941855896,0,0,0.212574920101683,0.371807292777007,0,0,0.552032215008773,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.235939446695481,0,0,0,0,0,0,0,0,0.261906694481422,0.163771917510097,0,0,0,0,0.0634158101939068,0,0,0,0.703484977438482,0,0,0,0,0,0,0.345701962667338,0,0,0,0.118193840883968,0,0,0,0,0,0.215927591218621,1.43325506366115,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|short_description=p@chr20:61427629..61427650,- | |short_description=p@chr20:61427629..61427650,- | ||
}} | }} |
Latest revision as of 16:12, 28 July 2015
Short description: | p@chr20:61427629..61427650, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:61427629..61427650, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.73e-13 | 136 |
granulocyte | 2.04e-12 | 8 |
hematopoietic stem cell | 1.13e-11 | 168 |
innate effector T cell | 1.32e-11 | 1 |
immature NK T cell | 1.32e-11 | 1 |
effector T cell | 1.32e-11 | 1 |
mature NK T cell | 1.32e-11 | 1 |
immature NK T cell stage IV | 1.32e-11 | 1 |
immature NK T cell stage I | 1.32e-11 | 1 |
immature NK T cell stage II | 1.32e-11 | 1 |
immature NK T cell stage III | 1.32e-11 | 1 |
hematopoietic cell | 5.71e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.61e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.61e-10 | 161 |
blood cell | 3.53e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 3.29e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.55e-11 | 4 |
hemolymphoid system gland | 1.55e-11 | 4 |
thymic region | 1.55e-11 | 4 |
pharyngeal gland | 1.55e-11 | 4 |
thymus primordium | 1.55e-11 | 4 |
pharyngeal epithelium | 5.55e-08 | 6 |
hemopoietic organ | 5.84e-07 | 7 |
immune organ | 5.84e-07 | 7 |