FFCP PHASE1:Hg19::chr12:54652060..54652084,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23468 | |EntrezGene=23468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1555 | |HGNC=1555 | ||
|TSSclassifier=strong | |||
|UniProt=F8VNY3 | |UniProt=F8VNY3 | ||
|association_with_transcript=126bp_to_ENST00000552562_5end | |association_with_transcript=126bp_to_ENST00000552562_5end | ||
|cluster_id=chr12:54652060..54652084,- | |||
|coexpression_cluster_id=C165 | |coexpression_cluster_id=C165 | ||
|description=CAGE_peak_16_at_CBX5_5end | |description=CAGE_peak_16_at_CBX5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!2.56e-12!180;CL:0000153!5.58e-12!9;CL:0000447!5.58e-12!9;CL:0000327!2.12e-11!14;CL:0000499!2.84e-10!27;CL:0000667!7.33e-10!6;CL:0000058!7.33e-10!6;CL:0000138!7.33e-10!6;CL:0002620!5.82e-09!23;CL:0000057!9.70e-07!75 | |ontology_enrichment_celltype=CL:0000055!2.56e-12!180;CL:0000153!5.58e-12!9;CL:0000447!5.58e-12!9;CL:0000327!2.12e-11!14;CL:0000499!2.84e-10!27;CL:0000667!7.33e-10!6;CL:0000058!7.33e-10!6;CL:0000138!7.33e-10!6;CL:0002620!5.82e-09!23;CL:0000057!9.70e-07!75 | ||
|ontology_enrichment_celltype_v019=CL:0000138;4.74e-26;6!CL:0000153;1.81e-17;9!CL:0000447;1.81e-17;9!CL:0000327;6.16e-16;15!CL:1000306;2.60e-10;4!CL:0002547;2.60e-10;4!CL:0000151;9.29e-09;36!CL:0000499;1.77e-08;28 | |ontology_enrichment_celltype_v019=CL:0000138;4.74e-26;6!CL:0000153;1.81e-17;9!CL:0000447;1.81e-17;9!CL:0000327;6.16e-16;15!CL:1000306;2.60e-10;4!CL:0002547;2.60e-10;4!CL:0000151;9.29e-09;36!CL:0000499;1.77e-08;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000058,4.05e-26,6;CL:0000138,4.05e-26,6;CL:0000153,1.63e-17,9;CL:0000447,1.63e-17,9;CL:0000327,6.17e-16,15;CL:1000306,2.99e-10,4;CL:0002547,2.99e-10,4;CL:0000151,3.75e-09,36;CL:0000499,1.77e-08,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!1.51e-07!5;DOID:450!1.51e-07!5;DOID:66!1.51e-07!5;DOID:423!1.51e-07!5;DOID:0080000!1.51e-07!5;DOID:11722!1.51e-07!5 | |ontology_enrichment_disease=DOID:17!1.51e-07!5;DOID:450!1.51e-07!5;DOID:66!1.51e-07!5;DOID:423!1.51e-07!5;DOID:0080000!1.51e-07!5;DOID:11722!1.51e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3350;2.87e-20;2!DOID:6193;2.53e-11;1!DOID:3371;1.05e-10;1!DOID:4549;1.05e-10;1!DOID:5861;1.05e-10;1!DOID:6496;1.05e-10;1!DOID:3571;1.05e-10;1!DOID:17;2.00e-08;5!DOID:450;2.00e-08;5!DOID:66;2.00e-08;5!DOID:423;2.00e-08;5!DOID:0080000;2.00e-08;5!DOID:11722;2.00e-08;5!DOID:201;3.68e-07;6!DOID:0060100;3.68e-07;6 | |ontology_enrichment_disease_v019=DOID:3350;2.87e-20;2!DOID:6193;2.53e-11;1!DOID:3371;1.05e-10;1!DOID:4549;1.05e-10;1!DOID:5861;1.05e-10;1!DOID:6496;1.05e-10;1!DOID:3571;1.05e-10;1!DOID:17;2.00e-08;5!DOID:450;2.00e-08;5!DOID:66;2.00e-08;5!DOID:423;2.00e-08;5!DOID:0080000;2.00e-08;5!DOID:11722;2.00e-08;5!DOID:201;3.68e-07;6!DOID:0060100;3.68e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:3350,3.67e-20,2;DOID:6193,2.53e-11,1;DOID:3371,6.77e-11,1;DOID:4549,6.77e-11,1;DOID:5861,6.77e-11,1;DOID:6496,6.77e-11,1;DOID:3571,1.33e-10,1;DOID:17,2.08e-08,5;DOID:450,2.08e-08,5;DOID:66,2.08e-08,5;DOID:423,2.08e-08,5;DOID:0080000,2.08e-08,5;DOID:11722,2.08e-08,5;DOID:201,3.25e-07,6;DOID:0060100,3.25e-07,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.60e-10;4!UBERON:0000415;2.60e-10;4!UBERON:0007240;2.60e-10;4!UBERON:0005742;2.60e-10;4!UBERON:0005734;2.60e-10;4!UBERON:0004664;2.60e-10;4!UBERON:0004663;2.60e-10;4 | |ontology_enrichment_uberon_v019=UBERON:0004797;2.60e-10;4!UBERON:0000415;2.60e-10;4!UBERON:0007240;2.60e-10;4!UBERON:0005742;2.60e-10;4!UBERON:0005734;2.60e-10;4!UBERON:0004664;2.60e-10;4!UBERON:0004663;2.60e-10;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,2.99e-10,4;UBERON:0007240,2.99e-10,4;UBERON:0005742,2.99e-10,4;UBERON:0005734,2.99e-10,4;UBERON:0004664,2.99e-10,4;UBERON:0004663,2.99e-10,4 | |||
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| ||
|short_description=p16@CBX5 | |short_description=p16@CBX5 | ||
}} | }} |
Latest revision as of 05:28, 19 September 2015
Short description: | p16@CBX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CBX5_5end |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | 126bp_to_ENST00000552562_5end |
EntrezGene: | CBX5 |
HGNC: | 1555 |
UniProt: | F8VNY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 4.05e-26 | 6 |
chondrocyte | 4.05e-26 | 6 |
GAG secreting cell | 1.63e-17 | 9 |
carbohydrate secreting cell | 1.63e-17 | 9 |
extracellular matrix secreting cell | 6.17e-16 | 15 |
fibroblast of tunica adventitia of artery | 2.99e-10 | 4 |
fibroblast of the aortic adventitia | 2.99e-10 | 4 |
secretory cell | 3.75e-09 | 36 |
stromal cell | 1.77e-08 | 28 |
Ontology term | p-value | n |
---|---|---|
artery wall | 2.99e-10 | 4 |
tunica adventitia of artery | 2.99e-10 | 4 |
adventitia | 2.99e-10 | 4 |
tunica adventitia of blood vessel | 2.99e-10 | 4 |
aorta tunica adventitia | 2.99e-10 | 4 |
aorta wall | 2.99e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
mesenchymal cell neoplasm | 3.67e-20 | 2 |
epithelioid sarcoma | 2.53e-11 | 1 |
chondrosarcoma | 6.77e-11 | 1 |
extraosseous chondrosarcoma | 6.77e-11 | 1 |
myxoid chondrosarcoma | 6.77e-11 | 1 |
extraskeletal myxoid chondrosarcoma | 6.77e-11 | 1 |
liver cancer | 1.33e-10 | 1 |
musculoskeletal system disease | 2.08e-08 | 5 |
myotonic disease | 2.08e-08 | 5 |
muscle tissue disease | 2.08e-08 | 5 |
myopathy | 2.08e-08 | 5 |
muscular disease | 2.08e-08 | 5 |
myotonic dystrophy | 2.08e-08 | 5 |
connective tissue cancer | 3.25e-07 | 6 |
musculoskeletal system cancer | 3.25e-07 | 6 |