FFCP PHASE1:Hg19::chr8:68256003..68256034,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10565 | |EntrezGene=10565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15772 | |HGNC=15772 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6D6,E5RJN9 | |UniProt=Q9Y6D6,E5RJN9 | ||
|association_with_transcript=-91bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end | |association_with_transcript=-91bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end | ||
|cluster_id=chr8:68256003..68256034,- | |||
|coexpression_cluster_id=C176 | |coexpression_cluster_id=C176 | ||
|description=CAGE_peak_1_at_ARFGEF1_5end | |description=CAGE_peak_1_at_ARFGEF1_5end | ||
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|ontology_enrichment_celltype=CL:0000738!2.35e-43!140;CL:0000037!1.86e-42!172;CL:0000566!1.86e-42!172;CL:0002032!1.59e-38!165;CL:0000837!1.59e-38!165;CL:0000988!4.36e-37!182;CL:0002087!4.83e-35!119;CL:0002031!5.69e-34!124;CL:0000766!3.29e-27!76;CL:0000763!3.50e-25!112;CL:0000049!3.50e-25!112;CL:0000557!3.61e-24!71;CL:0002009!5.68e-22!65;CL:0002194!2.81e-21!63;CL:0000576!2.81e-21!63;CL:0000040!2.81e-21!63;CL:0000559!2.81e-21!63;CL:0000839!7.87e-21!70;CL:0002057!2.07e-20!42;CL:0000860!1.06e-18!45;CL:0000838!3.66e-12!52;CL:0000542!5.83e-12!53;CL:0000051!5.83e-12!53;CL:0000791!2.11e-10!18;CL:0000789!2.11e-10!18;CL:0002420!2.11e-10!18;CL:0002419!2.11e-10!18;CL:0000790!2.11e-10!18;CL:0000084!5.09e-09!25;CL:0000827!5.09e-09!25;CL:0000625!6.72e-07!11 | |ontology_enrichment_celltype=CL:0000738!2.35e-43!140;CL:0000037!1.86e-42!172;CL:0000566!1.86e-42!172;CL:0002032!1.59e-38!165;CL:0000837!1.59e-38!165;CL:0000988!4.36e-37!182;CL:0002087!4.83e-35!119;CL:0002031!5.69e-34!124;CL:0000766!3.29e-27!76;CL:0000763!3.50e-25!112;CL:0000049!3.50e-25!112;CL:0000557!3.61e-24!71;CL:0002009!5.68e-22!65;CL:0002194!2.81e-21!63;CL:0000576!2.81e-21!63;CL:0000040!2.81e-21!63;CL:0000559!2.81e-21!63;CL:0000839!7.87e-21!70;CL:0002057!2.07e-20!42;CL:0000860!1.06e-18!45;CL:0000838!3.66e-12!52;CL:0000542!5.83e-12!53;CL:0000051!5.83e-12!53;CL:0000791!2.11e-10!18;CL:0000789!2.11e-10!18;CL:0002420!2.11e-10!18;CL:0002419!2.11e-10!18;CL:0000790!2.11e-10!18;CL:0000084!5.09e-09!25;CL:0000827!5.09e-09!25;CL:0000625!6.72e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.64e-17;33!CL:0002057;5.64e-17;33!CL:0000576;1.50e-14;48!CL:0000473;1.59e-13;39!CL:0000234;1.59e-13;39!CL:0000766;5.54e-12;69!CL:0002087;3.34e-11;104!CL:0000791;2.01e-10;18!CL:0000789;2.01e-10;18!CL:0002419;2.01e-10;18!CL:0000738;5.69e-10;136!CL:0000084;5.61e-09;25!CL:0000763;6.73e-09;100!CL:0000542;1.64e-07;53!CL:0000988;1.98e-07;177!CL:0000625;6.40e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;5.64e-17;33!CL:0002057;5.64e-17;33!CL:0000576;1.50e-14;48!CL:0000473;1.59e-13;39!CL:0000234;1.59e-13;39!CL:0000766;5.54e-12;69!CL:0002087;3.34e-11;104!CL:0000791;2.01e-10;18!CL:0000789;2.01e-10;18!CL:0002419;2.01e-10;18!CL:0000738;5.69e-10;136!CL:0000084;5.61e-09;25!CL:0000763;6.73e-09;100!CL:0000542;1.64e-07;53!CL:0000988;1.98e-07;177!CL:0000625;6.40e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.48e-45,136;CL:0000037,1.33e-43,168;CL:0002032,1.26e-39,161;CL:0000837,1.26e-39,161;CL:0000988,8.64e-39,177;CL:0002087,1.89e-36,115;CL:0002031,2.75e-35,120;CL:0000766,6.03e-29,72;CL:0000763,2.69e-26,108;CL:0000049,2.69e-26,108;CL:0000557,7.82e-26,67;CL:0002009,1.25e-23,61;CL:0002194,6.15e-23,59;CL:0000576,6.15e-23,59;CL:0000040,6.15e-23,59;CL:0000559,6.15e-23,59;CL:0000839,2.66e-22,66;CL:0000860,2.07e-20,42;CL:0002057,2.07e-20,42;CL:0000473,2.49e-19,48;CL:0000234,2.49e-19,48;CL:0000838,3.66e-12,52;CL:0000542,5.83e-12,53;CL:0000051,5.83e-12,53;CL:0000791,2.11e-10,18;CL:0000789,2.11e-10,18;CL:0002420,2.11e-10,18;CL:0002419,2.11e-10,18;CL:0000790,2.11e-10,18;CL:0000084,5.09e-09,25;CL:0000827,5.09e-09,25;CL:0000625,6.72e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.47e-15;42!CL:0000790;2.01e-10;18!CL:0000049;1.38e-07;108!CL:0000051;1.64e-07;53 | |ontology_enrichment_development_v019=CL:0002057;5.47e-15;42!CL:0000790;2.01e-10;18!CL:0000049;1.38e-07;108!CL:0000051;1.64e-07;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-26!102;UBERON:0003061!1.81e-26!102;UBERON:0002193!3.87e-23!112;UBERON:0002371!1.12e-18!80;UBERON:0001474!3.98e-16!86;UBERON:0007023!1.34e-14!115;UBERON:0002405!9.31e-13!115;UBERON:0004765!1.33e-11!101;UBERON:0001434!1.33e-11!101 | |ontology_enrichment_uberon=UBERON:0002390!1.81e-26!102;UBERON:0003061!1.81e-26!102;UBERON:0002193!3.87e-23!112;UBERON:0002371!1.12e-18!80;UBERON:0001474!3.98e-16!86;UBERON:0007023!1.34e-14!115;UBERON:0002405!9.31e-13!115;UBERON:0004765!1.33e-11!101;UBERON:0001434!1.33e-11!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p1@ARFGEF1 | |short_description=p1@ARFGEF1 | ||
}} | }} |
Latest revision as of 22:19, 18 September 2015
Short description: | p1@ARFGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARFGEF1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | -91bp_to_ENST00000262215, ENST00000519436, NM_006421, uc003xxo.1_5end |
EntrezGene: | ARFGEF1 |
HGNC: | 15772 |
UniProt: | Q9Y6D6E5RJN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.62e-28 | 98 |
blood island | 9.62e-28 | 98 |
hemolymphoid system | 3.56e-24 | 108 |
bone marrow | 7.52e-20 | 76 |
immune system | 7.66e-19 | 93 |
bone element | 4.38e-17 | 82 |
adult organism | 2.36e-14 | 114 |
skeletal element | 1.12e-13 | 90 |
skeletal system | 2.67e-11 | 100 |