FFCP PHASE1:Hg19::chr20:44640269..44640283,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4318 | |EntrezGene=4318 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7176 | |HGNC=7176 | ||
|TSSclassifier=strong | |||
|UniProt=F5H3W7 | |UniProt=F5H3W7 | ||
|association_with_transcript=-270bp_to_ENST00000545925_5end | |association_with_transcript=-270bp_to_ENST00000545925_5end | ||
|cluster_id=chr20:44640269..44640283,+ | |||
|coexpression_cluster_id=C71 | |coexpression_cluster_id=C71 | ||
|description=CAGE_peak_7_at_MMP9_5end | |description=CAGE_peak_7_at_MMP9_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002009!3.20e-23!65;CL:0000557!6.40e-21!71;CL:0000766!2.62e-19!76;CL:0002194!7.43e-19!63;CL:0000576!7.43e-19!63;CL:0000040!7.43e-19!63;CL:0000559!7.43e-19!63;CL:0000235!1.10e-18!10;CL:0000839!1.29e-16!70;CL:0000763!6.51e-15!112;CL:0000049!6.51e-15!112;CL:0000840!7.10e-14!5;CL:0001029!7.10e-14!5;CL:0000738!1.05e-13!140;CL:0002031!5.86e-13!124;CL:0001014!2.34e-11!2;CL:0001016!2.34e-11!2;CL:0002032!7.28e-11!165;CL:0000837!7.28e-11!165;CL:0002087!8.66e-11!119;CL:0000037!3.22e-10!172;CL:0000566!3.22e-10!172;CL:0000988!2.20e-09!182;CL:0000990!2.82e-09!8;CL:0000775!6.24e-08!3;CL:0002057!7.41e-08!42;CL:0000451!1.35e-07!10;CL:0000860!3.10e-07!45 | |ontology_enrichment_celltype=CL:0002009!3.20e-23!65;CL:0000557!6.40e-21!71;CL:0000766!2.62e-19!76;CL:0002194!7.43e-19!63;CL:0000576!7.43e-19!63;CL:0000040!7.43e-19!63;CL:0000559!7.43e-19!63;CL:0000235!1.10e-18!10;CL:0000839!1.29e-16!70;CL:0000763!6.51e-15!112;CL:0000049!6.51e-15!112;CL:0000840!7.10e-14!5;CL:0001029!7.10e-14!5;CL:0000738!1.05e-13!140;CL:0002031!5.86e-13!124;CL:0001014!2.34e-11!2;CL:0001016!2.34e-11!2;CL:0002032!7.28e-11!165;CL:0000837!7.28e-11!165;CL:0002087!8.66e-11!119;CL:0000037!3.22e-10!172;CL:0000566!3.22e-10!172;CL:0000988!2.20e-09!182;CL:0000990!2.82e-09!8;CL:0000775!6.24e-08!3;CL:0002057!7.41e-08!42;CL:0000451!1.35e-07!10;CL:0000860!3.10e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.99e-147;6!CL:0000473;1.15e-19;39!CL:0000234;1.15e-19;39!CL:0000775;1.67e-09;3!CL:0000766;1.47e-08;69 | |ontology_enrichment_celltype_v019=CL:0000235;1.99e-147;6!CL:0000473;1.15e-19;39!CL:0000234;1.15e-19;39!CL:0000775;1.67e-09;3!CL:0000766;1.47e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.99e-147,6;CL:0000766,1.13e-21,72;CL:0002194,2.94e-20,59;CL:0000576,2.94e-20,59;CL:0000040,2.94e-20,59;CL:0000559,2.94e-20,59;CL:0002009,1.31e-19,61;CL:0000473,9.40e-19,48;CL:0000234,9.40e-19,48;CL:0000839,3.73e-18,66;CL:0000557,6.87e-18,67;CL:0000763,1.54e-14,108;CL:0000049,1.54e-14,108;CL:0000738,1.45e-11,136;CL:0002087,1.68e-10,115;CL:0002031,4.58e-10,120;CL:0002032,9.03e-10,161;CL:0000837,9.03e-10,161;CL:0000775,1.67e-09,3;CL:0000037,2.31e-09,168;CL:0000988,6.97e-09,177 | |||
|ontology_enrichment_development_v019=CL:0000049;1.41e-07;108 | |ontology_enrichment_development_v019=CL:0000049;1.41e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.08e-20!102;UBERON:0003061!2.08e-20!102;UBERON:0002193!6.13e-20!112;UBERON:0002371!4.14e-18!80;UBERON:0002405!2.22e-17!115;UBERON:0001474!1.46e-16!86;UBERON:0004765!1.72e-13!101;UBERON:0001434!1.72e-13!101;UBERON:0002204!1.90e-09!167;UBERON:0003081!8.76e-09!216 | |ontology_enrichment_uberon=UBERON:0002390!2.08e-20!102;UBERON:0003061!2.08e-20!102;UBERON:0002193!6.13e-20!112;UBERON:0002371!4.14e-18!80;UBERON:0002405!2.22e-17!115;UBERON:0001474!1.46e-16!86;UBERON:0004765!1.72e-13!101;UBERON:0001434!1.72e-13!101;UBERON:0002204!1.90e-09!167;UBERON:0003081!8.76e-09!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.26e-16,76;UBERON:0001474,1.14e-14,82;UBERON:0004765,2.19e-13,90;UBERON:0002405,5.85e-13,93;UBERON:0002390,2.63e-12,98;UBERON:0003061,2.63e-12,98;UBERON:0001434,4.61e-12,100;UBERON:0002193,3.54e-11,108;UBERON:0002204,3.18e-07,167 | |||
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|short_description=p7@MMP9 | |short_description=p7@MMP9 | ||
}} | }} |
Latest revision as of 13:57, 16 September 2015
Short description: | p7@MMP9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MMP9_5end |
Coexpression cluster: | C71_Monocytederived_Macrophage_CD14_Dendritic_Osteoblast_leiomyoma_Prostate |
Association with transcript: | -270bp_to_ENST00000545925_5end |
EntrezGene: | MMP9 |
HGNC: | 7176 |
UniProt: | F5H3W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.99e-147 | 6 |
myeloid leukocyte | 1.13e-21 | 72 |
monopoietic cell | 2.94e-20 | 59 |
monocyte | 2.94e-20 | 59 |
monoblast | 2.94e-20 | 59 |
promonocyte | 2.94e-20 | 59 |
macrophage dendritic cell progenitor | 1.31e-19 | 61 |
defensive cell | 9.40e-19 | 48 |
phagocyte | 9.40e-19 | 48 |
myeloid lineage restricted progenitor cell | 3.73e-18 | 66 |
granulocyte monocyte progenitor cell | 6.87e-18 | 67 |
myeloid cell | 1.54e-14 | 108 |
common myeloid progenitor | 1.54e-14 | 108 |
leukocyte | 1.45e-11 | 136 |
nongranular leukocyte | 1.68e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.58e-10 | 120 |
hematopoietic oligopotent progenitor cell | 9.03e-10 | 161 |
hematopoietic multipotent progenitor cell | 9.03e-10 | 161 |
neutrophil | 1.67e-09 | 3 |
hematopoietic stem cell | 2.31e-09 | 168 |
hematopoietic cell | 6.97e-09 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.26e-16 | 76 |
bone element | 1.14e-14 | 82 |
skeletal element | 2.19e-13 | 90 |
immune system | 5.85e-13 | 93 |
hematopoietic system | 2.63e-12 | 98 |
blood island | 2.63e-12 | 98 |
skeletal system | 4.61e-12 | 100 |
hemolymphoid system | 3.54e-11 | 108 |
musculoskeletal system | 3.18e-07 | 167 |