FFCP PHASE1:Hg19::chr15:80799466..80799469,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:80799466..80799469,+ | |||
|description=CAGE_peak_at_chr15:80799466..80799469,+ | |description=CAGE_peak_at_chr15:80799466..80799469,+ | ||
|id=chr15:80799466..80799469,+ | |id=chr15:80799466..80799469,+ | ||
|ontology_enrichment_celltype=CL:0000188!4.05e-24!9;CL:0000057!9.11e-18!75;CL:0000055!2.77e-17!180;CL:0002620!6.67e-15!23;CL:0000594!6.92e-14!3;CL:1000306!4.98e-11!4;CL:0002547!4.98e-11!4;CL:0000197!1.08e-07!6;CL:0000098!1.08e-07!6;CL:0002167!1.08e-07!6;CL:0000346!1.30e-07!3;CL:1000428!1.30e-07!3;CL:0000183!3.93e-07!59;CL:0002580!5.28e-07!3 | |ontology_enrichment_celltype=CL:0000188!4.05e-24!9;CL:0000057!9.11e-18!75;CL:0000055!2.77e-17!180;CL:0002620!6.67e-15!23;CL:0000594!6.92e-14!3;CL:1000306!4.98e-11!4;CL:0002547!4.98e-11!4;CL:0000197!1.08e-07!6;CL:0000098!1.08e-07!6;CL:0002167!1.08e-07!6;CL:0000346!1.30e-07!3;CL:1000428!1.30e-07!3;CL:0000183!3.93e-07!59;CL:0002580!5.28e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000346;3.66e-23;3!CL:1000428;3.66e-23;3!CL:0002559;1.71e-14;5!CL:0000188;1.04e-08;9 | |ontology_enrichment_celltype_v019=CL:0000346;3.66e-23;3!CL:1000428;3.66e-23;3!CL:0002559;1.71e-14;5!CL:0000188;1.04e-08;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000346,3.27e-23,3;CL:1000428,3.27e-23,3;CL:0002559,1.60e-14,5;CL:0000188,1.04e-08,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!2.98e-15!5;DOID:450!2.98e-15!5;DOID:66!2.98e-15!5;DOID:423!2.98e-15!5;DOID:0080000!2.98e-15!5;DOID:11722!2.98e-15!5 | |ontology_enrichment_disease=DOID:17!2.98e-15!5;DOID:450!2.98e-15!5;DOID:66!2.98e-15!5;DOID:423!2.98e-15!5;DOID:0080000!2.98e-15!5;DOID:11722!2.98e-15!5 | ||
|ontology_enrichment_disease_v019=DOID:17;1.71e-14;5!DOID:450;1.71e-14;5!DOID:66;1.71e-14;5!DOID:423;1.71e-14;5!DOID:0080000;1.71e-14;5!DOID:11722;1.71e-14;5 | |ontology_enrichment_disease_v019=DOID:17;1.71e-14;5!DOID:450;1.71e-14;5!DOID:66;1.71e-14;5!DOID:423;1.71e-14;5!DOID:0080000;1.71e-14;5!DOID:11722;1.71e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,1.83e-14,5;DOID:450,1.83e-14,5;DOID:66,1.83e-14,5;DOID:423,1.83e-14,5;DOID:0080000,1.83e-14,5;DOID:11722,1.83e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!1.60e-12!45;UBERON:0002416!1.60e-12!45;UBERON:0002097!4.42e-12!40;UBERON:0000415!4.98e-11!4;UBERON:0007240!4.98e-11!4;UBERON:0005742!4.98e-11!4;UBERON:0005734!4.98e-11!4;UBERON:0004664!4.98e-11!4;UBERON:0004663!4.98e-11!4;UBERON:0003102!6.42e-09!95;UBERON:0000914!8.98e-08!83;UBERON:0002329!8.98e-08!83;UBERON:0003077!8.98e-08!83;UBERON:0003059!8.98e-08!83;UBERON:0007282!8.98e-08!83;UBERON:0009618!8.98e-08!83;UBERON:0007285!8.98e-08!83;UBERON:0000412!1.30e-07!3;UBERON:0001992!1.30e-07!3;UBERON:0004290!5.79e-07!70 | |ontology_enrichment_uberon=UBERON:0002199!1.60e-12!45;UBERON:0002416!1.60e-12!45;UBERON:0002097!4.42e-12!40;UBERON:0000415!4.98e-11!4;UBERON:0007240!4.98e-11!4;UBERON:0005742!4.98e-11!4;UBERON:0005734!4.98e-11!4;UBERON:0004664!4.98e-11!4;UBERON:0004663!4.98e-11!4;UBERON:0003102!6.42e-09!95;UBERON:0000914!8.98e-08!83;UBERON:0002329!8.98e-08!83;UBERON:0003077!8.98e-08!83;UBERON:0003059!8.98e-08!83;UBERON:0007282!8.98e-08!83;UBERON:0009618!8.98e-08!83;UBERON:0007285!8.98e-08!83;UBERON:0000412!1.30e-07!3;UBERON:0001992!1.30e-07!3;UBERON:0004290!5.79e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0000412;3.66e-23;3!UBERON:0001992;3.66e-23;3!UBERON:0002073;1.71e-14;5!UBERON:0002097;2.91e-09;41!UBERON:0002067;1.16e-08;9!UBERON:0003102;2.59e-07;50 | |ontology_enrichment_uberon_v019=UBERON:0000412;3.66e-23;3!UBERON:0001992;3.66e-23;3!UBERON:0002073;1.71e-14;5!UBERON:0002097;2.91e-09;41!UBERON:0002067;1.16e-08;9!UBERON:0003102;2.59e-07;50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,3.27e-23,3;UBERON:0001992,3.27e-23,3;UBERON:0002073,1.60e-14,5;UBERON:0005086,1.60e-14,5;UBERON:0002067,1.12e-08,9;UBERON:0004016,1.12e-08,9;UBERON:0010083,1.12e-08,9;UBERON:0002097,1.52e-07,41;UBERON:0002199,7.74e-07,46;UBERON:0002416,7.74e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,1.07633781413317,0,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.689182862422653,0.107420244868274,0.145016693914229,0.255679882248303,2.75999310504886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0,1.07633781413317,0,0.211931901159562,0.600182192168805,0.103052529238439,0,0,0,0.0974370051611986,0,0.184099797284599,0,0.355009592516614,0.403008392910561,0.67824236924195,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.178428988797162,0,0.468565659970853,0,0,0,0,0,0.173767228936166,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.689182862422653,0.107420244868274,0.145016693914229,0.255679882248303,2.75999310504886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:80799466..80799469,+ | |short_description=p@chr15:80799466..80799469,+ | ||
}} | }} |
Latest revision as of 04:47, 25 July 2015
Short description: | p@chr15:80799466..80799469, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:80799466..80799469, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 3.27e-23 | 3 |
stem cell of epidermis | 3.27e-23 | 3 |
hair follicle cell | 1.60e-14 | 5 |
cell of skeletal muscle | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 3.27e-23 | 3 |
papillary layer of dermis | 3.27e-23 | 3 |
hair follicle | 1.60e-14 | 5 |
hair follicle placode | 1.60e-14 | 5 |
dermis | 1.12e-08 | 9 |
dermatome | 1.12e-08 | 9 |
future dermis | 1.12e-08 | 9 |
skin of body | 1.52e-07 | 41 |
integument | 7.74e-07 | 46 |
integumental system | 7.74e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.83e-14 | 5 |
myotonic disease | 1.83e-14 | 5 |
muscle tissue disease | 1.83e-14 | 5 |
myopathy | 1.83e-14 | 5 |
muscular disease | 1.83e-14 | 5 |
myotonic dystrophy | 1.83e-14 | 5 |