FFCP PHASE1:Hg19::chr10:82049737..82049754,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4143 | |EntrezGene=4143 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6903 | |HGNC=6903 | ||
|TSSclassifier=strong | |||
|UniProt=Q00266 | |UniProt=Q00266 | ||
|association_with_transcript=-297bp_to_ENST00000372213_5end | |association_with_transcript=-297bp_to_ENST00000372213_5end | ||
|cluster_id=chr10:82049737..82049754,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_5_at_MAT1A_5end | |description=CAGE_peak_5_at_MAT1A_5end | ||
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|ontology_enrichment_celltype=CL:0000181!3.76e-21!12;CL:0000417!3.76e-21!12;CL:0000668!3.76e-21!12;CL:0000414!3.76e-21!12;CL:0000412!3.76e-21!12;CL:0000182!3.76e-21!12;CL:0000223!6.44e-15!59;CL:0002563!1.01e-07!4 | |ontology_enrichment_celltype=CL:0000181!3.76e-21!12;CL:0000417!3.76e-21!12;CL:0000668!3.76e-21!12;CL:0000414!3.76e-21!12;CL:0000412!3.76e-21!12;CL:0000182!3.76e-21!12;CL:0000223!6.44e-15!59;CL:0002563!1.01e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.79e-41;12 | |ontology_enrichment_celltype_v019=CL:0000182;2.79e-41;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.56e-41,12;CL:0000223,1.06e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.30e-29;11!UBERON:0009497;1.46e-24;13!UBERON:0001041;6.86e-11;30!UBERON:0003104;1.86e-10;31!CL:0000223;5.54e-07;58 | |ontology_enrichment_development_v019=UBERON:0004161;6.30e-29;11!UBERON:0009497;1.46e-24;13!UBERON:0001041;6.86e-11;30!UBERON:0003104;1.86e-10;31!CL:0000223;5.54e-07;58 | ||
|ontology_enrichment_disease=DOID:1799!2.50e-08!1;DOID:10165!2.50e-08!1;DOID:1798!2.50e-08!1;DOID:2355!5.82e-08!1;DOID:305!3.26e-07!106;DOID:299!9.63e-07!25 | |ontology_enrichment_disease=DOID:1799!2.50e-08!1;DOID:10165!2.50e-08!1;DOID:1798!2.50e-08!1;DOID:2355!5.82e-08!1;DOID:305!3.26e-07!106;DOID:299!9.63e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.78e-23!19;UBERON:0006925!3.78e-23!19;UBERON:0008836!3.78e-23!19;UBERON:0008835!7.71e-20!22;UBERON:0003894!7.71e-20!22;UBERON:0009854!6.30e-19!23;UBERON:0007499!2.54e-17!25;UBERON:0009497!2.54e-17!25;UBERON:0000015!2.54e-17!25;UBERON:0002423!2.54e-17!25;UBERON:0006235!2.54e-17!25;UBERON:0004161!2.54e-17!25;UBERON:0005057!1.30e-16!26;UBERON:0009856!1.30e-16!26;UBERON:0002368!3.64e-15!35;UBERON:0000949!3.63e-14!45;UBERON:0003929!6.50e-14!54;UBERON:0002365!9.56e-14!31;UBERON:0002330!9.56e-14!31;UBERON:0005172!1.25e-13!55;UBERON:0005173!1.25e-13!55;UBERON:0002417!4.28e-12!61;UBERON:0000916!4.28e-12!61;UBERON:0002530!2.16e-10!59;UBERON:0005911!3.48e-10!82;UBERON:0005177!1.11e-08!107;UBERON:0001301!2.17e-08!1;UBERON:0009569!4.19e-08!113;UBERON:0004921!6.51e-08!129;UBERON:0004185!6.51e-08!129;UBERON:0002581!7.16e-08!1;UBERON:0001242!1.01e-07!4;UBERON:0001262!1.01e-07!4;UBERON:0004786!1.01e-07!4;UBERON:0004808!1.01e-07!4;UBERON:0001277!1.01e-07!4;UBERON:0001041!8.26e-07!98 | |ontology_enrichment_uberon=UBERON:0002107!3.78e-23!19;UBERON:0006925!3.78e-23!19;UBERON:0008836!3.78e-23!19;UBERON:0008835!7.71e-20!22;UBERON:0003894!7.71e-20!22;UBERON:0009854!6.30e-19!23;UBERON:0007499!2.54e-17!25;UBERON:0009497!2.54e-17!25;UBERON:0000015!2.54e-17!25;UBERON:0002423!2.54e-17!25;UBERON:0006235!2.54e-17!25;UBERON:0004161!2.54e-17!25;UBERON:0005057!1.30e-16!26;UBERON:0009856!1.30e-16!26;UBERON:0002368!3.64e-15!35;UBERON:0000949!3.63e-14!45;UBERON:0003929!6.50e-14!54;UBERON:0002365!9.56e-14!31;UBERON:0002330!9.56e-14!31;UBERON:0005172!1.25e-13!55;UBERON:0005173!1.25e-13!55;UBERON:0002417!4.28e-12!61;UBERON:0000916!4.28e-12!61;UBERON:0002530!2.16e-10!59;UBERON:0005911!3.48e-10!82;UBERON:0005177!1.11e-08!107;UBERON:0001301!2.17e-08!1;UBERON:0009569!4.19e-08!113;UBERON:0004921!6.51e-08!129;UBERON:0004185!6.51e-08!129;UBERON:0002581!7.16e-08!1;UBERON:0001242!1.01e-07!4;UBERON:0001262!1.01e-07!4;UBERON:0004786!1.01e-07!4;UBERON:0004808!1.01e-07!4;UBERON:0001277!1.01e-07!4;UBERON:0001041!8.26e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.28e-50;19!UBERON:0006925;1.28e-50;19!UBERON:0002423;1.75e-38;25!UBERON:0002365;1.41e-29;31!UBERON:0002330;1.41e-29;31!UBERON:0002368;3.61e-27;33!UBERON:0000949;2.81e-19;43!UBERON:0005172;1.62e-12;52!UBERON:0005173;1.62e-12;52!UBERON:0002417;4.31e-10;58!UBERON:0000916;4.31e-10;58!UBERON:0002530;6.44e-10;57!UBERON:0001007;2.22e-08;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;1.28e-50;19!UBERON:0006925;1.28e-50;19!UBERON:0002423;1.75e-38;25!UBERON:0002365;1.41e-29;31!UBERON:0002330;1.41e-29;31!UBERON:0002368;3.61e-27;33!UBERON:0000949;2.81e-19;43!UBERON:0005172;1.62e-12;52!UBERON:0005173;1.62e-12;52!UBERON:0002417;4.31e-10;58!UBERON:0000916;4.31e-10;58!UBERON:0002530;6.44e-10;57!UBERON:0001007;2.22e-08;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.15e-50,19;UBERON:0006925,1.15e-50,19;UBERON:0008836,1.15e-50,19;UBERON:0008835,9.11e-44,22;UBERON:0003894,9.11e-44,22;UBERON:0009854,7.25e-42,23;UBERON:0007499,1.61e-38,25;UBERON:0009497,1.61e-38,25;UBERON:0000015,1.61e-38,25;UBERON:0002423,1.61e-38,25;UBERON:0006235,1.61e-38,25;UBERON:0004161,1.61e-38,25;UBERON:0009856,4.86e-37,26;UBERON:0002365,4.59e-31,31;UBERON:0002330,4.59e-31,31;UBERON:0002368,1.64e-27,35;UBERON:0000949,2.22e-21,45;UBERON:0003929,8.53e-18,54;UBERON:0005172,8.53e-18,54;UBERON:0005173,8.53e-18,54;UBERON:0002530,2.83e-16,59;UBERON:0002417,5.33e-16,60;UBERON:0000916,5.33e-16,60;UBERON:0005911,1.19e-11,82;UBERON:0009569,5.57e-11,112;UBERON:0001041,5.75e-11,87;UBERON:0005177,2.08e-09,101;UBERON:0003914,4.45e-08,117;UBERON:0004921,6.16e-08,118;UBERON:0005256,9.84e-08,122 | |||
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|short_description=p5@MAT1A | |short_description=p5@MAT1A | ||
}} | }} |
Latest revision as of 15:13, 19 September 2015
Short description: | p5@MAT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAT1A_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -297bp_to_ENST00000372213_5end |
EntrezGene: | MAT1A |
HGNC: | 6903 |
UniProt: | Q00266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.56e-41 | 12 |
endodermal cell | 1.06e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.15e-50 | 19 |
digestive gland | 1.15e-50 | 19 |
liver bud | 1.15e-50 | 19 |
hepatic diverticulum | 9.11e-44 | 22 |
liver primordium | 9.11e-44 | 22 |
digestive tract diverticulum | 7.25e-42 | 23 |
epithelial sac | 1.61e-38 | 25 |
epithelium of foregut-midgut junction | 1.61e-38 | 25 |
anatomical boundary | 1.61e-38 | 25 |
hepatobiliary system | 1.61e-38 | 25 |
foregut-midgut junction | 1.61e-38 | 25 |
septum transversum | 1.61e-38 | 25 |
sac | 4.86e-37 | 26 |
exocrine gland | 4.59e-31 | 31 |
exocrine system | 4.59e-31 | 31 |
endocrine gland | 1.64e-27 | 35 |
endocrine system | 2.22e-21 | 45 |
gut epithelium | 8.53e-18 | 54 |
abdomen element | 8.53e-18 | 54 |
abdominal segment element | 8.53e-18 | 54 |
gland | 2.83e-16 | 59 |
abdominal segment of trunk | 5.33e-16 | 60 |
abdomen | 5.33e-16 | 60 |
endo-epithelium | 1.19e-11 | 82 |
subdivision of trunk | 5.57e-11 | 112 |
foregut | 5.75e-11 | 87 |
trunk region element | 2.08e-09 | 101 |
epithelial tube | 4.45e-08 | 117 |
subdivision of digestive tract | 6.16e-08 | 118 |
trunk mesenchyme | 9.84e-08 | 122 |