FFCP PHASE1:Hg19::chr21:31768348..31768356,+: Difference between revisions
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|id=chr21:31768348..31768356,+
|short_description=p1@KRTAP13-1
|description=CAGE_peak_1_at_KRTAP13-1_5end
|association_with_transcript=-35bp_to_ENST00000355459,NM_1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140258 | |EntrezGene=140258 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18924 | |HGNC=18924 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUC0 | |UniProt=Q8IUC0 | ||
|association_with_transcript=-35bp_to_ENST00000355459,NM_181599,uc002yoa.2_5end | |||
|cluster_id=chr21:31768348..31768356,+ | |||
|coexpression_cluster_id=C197 | |||
|description=CAGE_peak_1_at_KRTAP13-1_5end | |||
|id=chr21:31768348..31768356,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;4.32e-26;2!UBERON:0010056;4.32e-26;2 | |||
|ontology_enrichment_disease=DOID:4362!5.08e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:4362;2.94e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.94e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0001723!1.01e-38!3;UBERON:0001033!1.01e-38!3;UBERON:0010056!1.01e-38!3;UBERON:0007029!1.33e-29!1;UBERON:0001042!4.28e-26!10;UBERON:0009145!4.28e-26!10;UBERON:0006562!8.35e-24!11;UBERON:0008814!1.10e-17!15;UBERON:0001557!3.96e-14!19;UBERON:0000014!1.96e-08!4;UBERON:0002370!2.61e-08!4;UBERON:0005058!2.61e-08!4;UBERON:0009113!2.61e-08!4;UBERON:0003295!2.61e-08!4;UBERON:0005562!2.61e-08!4;UBERON:0000078!2.60e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;3.35e-66;3!UBERON:0001033;3.35e-66;3!UBERON:0007029;3.99e-50;1!UBERON:0000014;1.13e-13;4!UBERON:0000020;1.12e-09;23!UBERON:0000002;1.32e-09;6!UBERON:0001560;1.32e-09;6!UBERON:0001032;2.56e-09;24!UBERON:0004456;2.56e-09;24!UBERON:0000165;3.92e-08;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.35e-66,3;UBERON:0001033,3.35e-66,3;UBERON:0010056,3.35e-66,3;UBERON:0007029,3.99e-50,1;UBERON:0001042,8.54e-21,10;UBERON:0009145,8.54e-21,10;UBERON:0006562,5.14e-19,11;UBERON:0000014,1.13e-13,4;UBERON:0008814,4.55e-12,18;UBERON:0001557,1.72e-11,19;UBERON:0000166,4.53e-10,22;UBERON:0000002,1.32e-09,6;UBERON:0001560,1.32e-09,6;UBERON:0000020,2.56e-09,24;UBERON:0001032,2.56e-09,24;UBERON:0004456,2.56e-09,24;UBERON:0000165,6.91e-08,29;UBERON:0000930,6.91e-08,29 | |||
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|short_description=p1@KRTAP13-1 | |||
}} | }} |
Latest revision as of 02:03, 18 September 2015
Short description: | p1@KRTAP13-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP13-1_5end |
Coexpression cluster: | C197_tongue_esophagus_tonsil_salivary_cervix_nasal_Gingival |
Association with transcript: | -35bp_to_ENST00000355459, NM_181599, uc002yoa.2_5end |
EntrezGene: | KRTAP13-1 |
HGNC: | 18924 |
UniProt: | Q8IUC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 3.35e-66 | 3 |
gustatory system | 3.35e-66 | 3 |
future tongue | 3.35e-66 | 3 |
surface | 3.99e-50 | 1 |
chordate pharynx | 8.54e-21 | 10 |
pharyngeal region of foregut | 8.54e-21 | 10 |
pharynx | 5.14e-19 | 11 |
zone of skin | 1.13e-13 | 4 |
pharyngeal arch system | 4.55e-12 | 18 |
upper respiratory tract | 1.72e-11 | 19 |
oral opening | 4.53e-10 | 22 |
uterine cervix | 1.32e-09 | 6 |
neck of organ | 1.32e-09 | 6 |
sense organ | 2.56e-09 | 24 |
sensory system | 2.56e-09 | 24 |
entire sense organ system | 2.56e-09 | 24 |
mouth | 6.91e-08 | 29 |
stomodeum | 6.91e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 2.94e-11 | 5 |