FFCP PHASE1:Hg19::chr11:84019133..84019135,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:84019133..84019135,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr11:84019133..84019135,- | |description=CAGE_peak_at_chr11:84019133..84019135,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000054;5.96e-34;2!CL:0000137;5.96e-34;2!CL:0000092;5.96e-34;2!CL:0002092;6.34e-08;10 | |ontology_enrichment_celltype_v019=CL:0000054;5.96e-34;2!CL:0000137;5.96e-34;2!CL:0000092;5.96e-34;2!CL:0002092;6.34e-08;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.05e-34,2;CL:0000137,7.05e-34,2;CL:0000092,7.05e-34,2;CL:0002092,6.56e-08,10;CL:0000062,2.63e-07,11;CL:0000375,2.63e-07,11;CL:0000335,2.63e-07,11 | |||
|ontology_enrichment_development_v019=UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10!CL:0000335;2.55e-07;11 | |ontology_enrichment_development_v019=UBERON:0003918;5.73e-08;10!UBERON:0007687;5.73e-08;10!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10!CL:0000335;2.55e-07;11 | ||
|ontology_enrichment_disease=DOID:0060085!8.14e-11!1;DOID:3165!8.14e-11!1;DOID:0060121!8.14e-11!1;DOID:2438!8.14e-11!1;DOID:4418!8.14e-11!1;DOID:3111!2.50e-10!1;DOID:3603!2.50e-10!1 | |ontology_enrichment_disease=DOID:0060085!8.14e-11!1;DOID:3165!8.14e-11!1;DOID:0060121!8.14e-11!1;DOID:2438!8.14e-11!1;DOID:4418!8.14e-11!1;DOID:3111!2.50e-10!1;DOID:3603!2.50e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:0060085;3.34e-66;1!DOID:3165;3.34e-66;1!DOID:0060121;3.34e-66;1!DOID:2438;3.34e-66;1!DOID:4418;3.34e-66;1!DOID:200;5.96e-34;2!DOID:4305;5.96e-34;2!DOID:0060072;9.45e-18;4!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6 | |ontology_enrichment_disease_v019=DOID:0060085;3.34e-66;1!DOID:3165;3.34e-66;1!DOID:0060121;3.34e-66;1!DOID:2438;3.34e-66;1!DOID:4418;3.34e-66;1!DOID:200;5.96e-34;2!DOID:4305;5.96e-34;2!DOID:0060072;9.45e-18;4!DOID:201;2.59e-12;6!DOID:0060100;2.59e-12;6 | ||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.66e-66,1;DOID:3165,4.66e-66,1;DOID:0060121,4.66e-66,1;DOID:2438,4.66e-66,1;DOID:4418,4.66e-66,1;DOID:200,7.05e-34,2;DOID:4305,7.05e-34,2;DOID:0060072,1.03e-17,4;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0006331!5.81e-13!3;UBERON:0000988!1.00e-12!3;UBERON:0002298!1.31e-10!8;UBERON:0002038!1.89e-10!1;UBERON:0009661!1.89e-10!1 | |ontology_enrichment_uberon=UBERON:0006331!5.81e-13!3;UBERON:0000988!1.00e-12!3;UBERON:0002298!1.31e-10!8;UBERON:0002038!1.89e-10!1;UBERON:0009661!1.89e-10!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0000014;9.45e-18;4!UBERON:0000473;1.41e-09;8!UBERON:0003135;2.55e-07;11!UBERON:0002371;8.14e-07;12 | |ontology_enrichment_uberon_v019=UBERON:0000014;9.45e-18;4!UBERON:0000473;1.41e-09;8!UBERON:0003135;2.55e-07;11!UBERON:0002371;8.14e-07;12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,1.03e-17,4;UBERON:0000473,1.35e-09,8;UBERON:0003135,2.47e-07,11 | |||
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|short_description=p@chr11:84019133..84019135,- | |short_description=p@chr11:84019133..84019135,- | ||
}} | }} |
Latest revision as of 03:07, 24 July 2015
Short description: | p@chr11:84019133..84019135, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:84019133..84019135, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.05e-34 | 2 |
osteocyte | 7.05e-34 | 2 |
osteoclast | 7.05e-34 | 2 |
bone marrow cell | 6.56e-08 | 10 |
osteoblast | 2.63e-07 | 11 |
osteoprogenitor cell | 2.63e-07 | 11 |
mesenchyme condensation cell | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 1.03e-17 | 4 |
testis | 1.35e-09 | 8 |
male reproductive organ | 2.47e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.66e-66 | 1 |
skin benign neoplasm | 4.66e-66 | 1 |
integumentary system benign neoplasm | 4.66e-66 | 1 |
dermis tumor | 4.66e-66 | 1 |
cutaneous fibrous histiocytoma | 4.66e-66 | 1 |
giant cell tumor | 7.05e-34 | 2 |
bone giant cell tumor | 7.05e-34 | 2 |
benign neoplasm | 1.03e-17 | 4 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |