FFCP PHASE1:Hg19::chr11:116694009..116694029,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337 | |EntrezGene=337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=602 | |HGNC=602 | ||
|TSSclassifier=strong | |||
|UniProt=P06727 | |UniProt=P06727 | ||
|association_with_transcript=0bp_to_ENST00000357780,NM_000482,uc001pps.1_5end | |association_with_transcript=0bp_to_ENST00000357780,NM_000482,uc001pps.1_5end | ||
|cluster_id=chr11:116694009..116694029,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_1_at_APOA4_5end | |description=CAGE_peak_1_at_APOA4_5end | ||
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|ontology_enrichment_celltype=CL:0000181!1.19e-13!12;CL:0000417!1.19e-13!12;CL:0000668!1.19e-13!12;CL:0000414!1.19e-13!12;CL:0000412!1.19e-13!12;CL:0000182!1.19e-13!12;CL:0002322!1.52e-11!5 | |ontology_enrichment_celltype=CL:0000181!1.19e-13!12;CL:0000417!1.19e-13!12;CL:0000668!1.19e-13!12;CL:0000414!1.19e-13!12;CL:0000412!1.19e-13!12;CL:0000182!1.19e-13!12;CL:0002322!1.52e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.78e-19;12!CL:0002322;1.84e-12;5!CL:0002563;2.06e-07;4 | |ontology_enrichment_celltype_v019=CL:0000182;8.78e-19;12!CL:0002322;1.84e-12;5!CL:0002563;2.06e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.81e-19,12;CL:0002322,1.84e-12,5;CL:0000223,1.52e-07,58;CL:0002563,2.00e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.45e-14;11!UBERON:0009497;2.69e-12;13!UBERON:0000358;7.97e-08;1!UBERON:0010115;1.69e-07;1!UBERON:0003104;3.22e-07;31 | |ontology_enrichment_development_v019=UBERON:0004161;1.45e-14;11!UBERON:0009497;2.69e-12;13!UBERON:0000358;7.97e-08;1!UBERON:0010115;1.69e-07;1!UBERON:0003104;3.22e-07;31 | ||
|ontology_enrichment_disease=DOID:114!9.23e-08!2 | |ontology_enrichment_disease=DOID:114!9.23e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:178;1.26e-07;1!DOID:326;1.26e-07;1!DOID:3978;1.26e-07;1!DOID:3394;1.26e-07;1!DOID:5844;1.26e-07;1 | |ontology_enrichment_disease_v019=DOID:178;1.26e-07;1!DOID:326;1.26e-07;1!DOID:3978;1.26e-07;1!DOID:3394;1.26e-07;1!DOID:5844;1.26e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:178,1.26e-07,1;DOID:326,1.26e-07,1;DOID:3978,1.26e-07,1;DOID:3394,1.26e-07,1;DOID:5844,1.26e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005057!9.21e-20!26;UBERON:0004921!1.51e-16!129;UBERON:0004185!1.51e-16!129;UBERON:0002368!5.11e-16!35;UBERON:0001007!7.78e-16!155;UBERON:0001555!7.78e-16!155;UBERON:0007026!7.78e-16!155;UBERON:0003929!2.28e-14!54;UBERON:0004119!7.33e-14!169;UBERON:0000925!7.33e-14!169;UBERON:0006595!7.33e-14!169;UBERON:0002107!9.85e-14!19;UBERON:0006925!9.85e-14!19;UBERON:0008836!9.85e-14!19;UBERON:0000949!9.91e-12!45;UBERON:0005409!1.02e-11!35;UBERON:0008835!1.29e-11!22;UBERON:0003894!1.29e-11!22;UBERON:0002530!4.70e-11!59;UBERON:0009854!4.92e-11!23;UBERON:0007499!5.19e-10!25;UBERON:0009497!5.19e-10!25;UBERON:0000015!5.19e-10!25;UBERON:0002423!5.19e-10!25;UBERON:0006235!5.19e-10!25;UBERON:0004161!5.19e-10!25;UBERON:0009856!1.47e-09!26;UBERON:0002365!1.63e-09!31;UBERON:0002330!1.63e-09!31;UBERON:0005911!3.45e-09!82;UBERON:0001041!5.38e-09!98;UBERON:0000160!5.99e-09!27;UBERON:0000077!3.40e-08!130;UBERON:0000059!6.54e-08!11;UBERON:0005172!1.01e-07!55;UBERON:0005173!1.01e-07!55;UBERON:0004177!1.17e-07!7;UBERON:0003127!1.76e-07!2;UBERON:0008814!4.24e-07!15;UBERON:0009722!4.66e-07!11;UBERON:0007690!4.66e-07!11 | |ontology_enrichment_uberon=UBERON:0005057!9.21e-20!26;UBERON:0004921!1.51e-16!129;UBERON:0004185!1.51e-16!129;UBERON:0002368!5.11e-16!35;UBERON:0001007!7.78e-16!155;UBERON:0001555!7.78e-16!155;UBERON:0007026!7.78e-16!155;UBERON:0003929!2.28e-14!54;UBERON:0004119!7.33e-14!169;UBERON:0000925!7.33e-14!169;UBERON:0006595!7.33e-14!169;UBERON:0002107!9.85e-14!19;UBERON:0006925!9.85e-14!19;UBERON:0008836!9.85e-14!19;UBERON:0000949!9.91e-12!45;UBERON:0005409!1.02e-11!35;UBERON:0008835!1.29e-11!22;UBERON:0003894!1.29e-11!22;UBERON:0002530!4.70e-11!59;UBERON:0009854!4.92e-11!23;UBERON:0007499!5.19e-10!25;UBERON:0009497!5.19e-10!25;UBERON:0000015!5.19e-10!25;UBERON:0002423!5.19e-10!25;UBERON:0006235!5.19e-10!25;UBERON:0004161!5.19e-10!25;UBERON:0009856!1.47e-09!26;UBERON:0002365!1.63e-09!31;UBERON:0002330!1.63e-09!31;UBERON:0005911!3.45e-09!82;UBERON:0001041!5.38e-09!98;UBERON:0000160!5.99e-09!27;UBERON:0000077!3.40e-08!130;UBERON:0000059!6.54e-08!11;UBERON:0005172!1.01e-07!55;UBERON:0005173!1.01e-07!55;UBERON:0004177!1.17e-07!7;UBERON:0003127!1.76e-07!2;UBERON:0008814!4.24e-07!15;UBERON:0009722!4.66e-07!11;UBERON:0007690!4.66e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.71e-21;19!UBERON:0006925;9.71e-21;19!UBERON:0005409;1.33e-17;22!UBERON:0000160;1.57e-17;17!UBERON:0002423;1.71e-15;25!UBERON:0002108;5.42e-13;4!UBERON:0002365;7.58e-12;31!UBERON:0002330;7.58e-12;31!UBERON:0000922;3.43e-11;49!UBERON:0004921;7.49e-11;33!UBERON:0002368;1.54e-10;33!UBERON:0001007;5.42e-09;81!UBERON:0007029;1.04e-07;1!UBERON:0002363;1.69e-07;1!UBERON:0001242;2.06e-07;4!UBERON:0001262;2.06e-07;4!UBERON:0004786;2.06e-07;4!UBERON:0004808;2.06e-07;4!UBERON:0001277;2.06e-07;4!UBERON:0000949;2.25e-07;43!UBERON:0001155;3.50e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002107;9.71e-21;19!UBERON:0006925;9.71e-21;19!UBERON:0005409;1.33e-17;22!UBERON:0000160;1.57e-17;17!UBERON:0002423;1.71e-15;25!UBERON:0002108;5.42e-13;4!UBERON:0002365;7.58e-12;31!UBERON:0002330;7.58e-12;31!UBERON:0000922;3.43e-11;49!UBERON:0004921;7.49e-11;33!UBERON:0002368;1.54e-10;33!UBERON:0001007;5.42e-09;81!UBERON:0007029;1.04e-07;1!UBERON:0002363;1.69e-07;1!UBERON:0001242;2.06e-07;4!UBERON:0001262;2.06e-07;4!UBERON:0004786;2.06e-07;4!UBERON:0004808;2.06e-07;4!UBERON:0001277;2.06e-07;4!UBERON:0000949;2.25e-07;43!UBERON:0001155;3.50e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.07e-20,19;UBERON:0006925,1.07e-20,19;UBERON:0008836,1.07e-20,19;UBERON:0008835,1.00e-17,22;UBERON:0003894,1.00e-17,22;UBERON:0000160,1.53e-17,17;UBERON:0009854,6.63e-17,23;UBERON:0007499,1.84e-15,25;UBERON:0009497,1.84e-15,25;UBERON:0000015,1.84e-15,25;UBERON:0002423,1.84e-15,25;UBERON:0006235,1.84e-15,25;UBERON:0004161,1.84e-15,25;UBERON:0005409,1.92e-15,25;UBERON:0009856,7.99e-15,26;UBERON:0004921,3.37e-14,118;UBERON:0002108,5.42e-13,4;UBERON:0003929,1.70e-12,54;UBERON:0002365,3.00e-12,31;UBERON:0002330,3.00e-12,31;UBERON:0001007,6.71e-11,145;UBERON:0001555,6.71e-11,145;UBERON:0007026,6.71e-11,145;UBERON:0002368,1.02e-10,35;UBERON:0004119,1.51e-09,160;UBERON:0000925,1.51e-09,160;UBERON:0006595,1.51e-09,160;UBERON:0011216,1.64e-08,223;UBERON:0000949,4.38e-08,45;UBERON:0007029,1.04e-07,1;UBERON:0002363,1.44e-07,1;UBERON:0007645,1.44e-07,1;UBERON:0007647,1.44e-07,1;UBERON:0010115,1.44e-07,1;UBERON:0005911,1.46e-07,82;UBERON:0002530,1.84e-07,59;UBERON:0001242,2.00e-07,4;UBERON:0001262,2.00e-07,4;UBERON:0004786,2.00e-07,4;UBERON:0004808,2.00e-07,4;UBERON:0001277,2.00e-07,4;UBERON:0001155,3.43e-07,9 | |||
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|short_description=p1@APOA4 | |short_description=p1@APOA4 | ||
}} | }} |
Latest revision as of 19:20, 15 September 2015
Short description: | p1@APOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOA4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000357780, NM_000482, uc001pps.1_5end |
EntrezGene: | APOA4 |
HGNC: | 602 |
UniProt: | P06727 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.81e-19 | 12 |
embryonic stem cell | 1.84e-12 | 5 |
endodermal cell | 1.52e-07 | 58 |
intestinal epithelial cell | 2.00e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 1.26e-07 | 1 |
ischemia | 1.26e-07 | 1 |
extrinsic cardiomyopathy | 1.26e-07 | 1 |
myocardial ischemia | 1.26e-07 | 1 |
myocardial infarction | 1.26e-07 | 1 |