FFCP PHASE1:Hg19::chr11:915207..915220,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=66005 | |EntrezGene=66005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28474 | |HGNC=28474 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWS9,E9PRL3 | |UniProt=Q9BWS9,E9PRL3 | ||
|association_with_transcript=-149bp_to_ENST00000449825,ENST00000533056,NM_001142675,uc010qww.1_5end | |association_with_transcript=-149bp_to_ENST00000449825,ENST00000533056,NM_001142675,uc010qww.1_5end | ||
|cluster_id=chr11:915207..915220,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_5_at_CHID1_5end | |description=CAGE_peak_5_at_CHID1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000453!1.24e-15!5;CL:0002619!8.47e-15!3;CL:0000990!5.68e-13!8;CL:0000451!1.49e-10!10;CL:0000767!8.06e-07!3 | |ontology_enrichment_celltype=CL:0000453!1.24e-15!5;CL:0002619!8.47e-15!3;CL:0000990!5.68e-13!8;CL:0000451!1.49e-10!10;CL:0000767!8.06e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000453;9.69e-37;5!CL:0002619;3.80e-27;3!CL:0000990;8.88e-21;8!CL:0000451;3.89e-17;10!CL:0000182;1.54e-07;12 | |ontology_enrichment_celltype_v019=CL:0000453;9.69e-37;5!CL:0002619;3.80e-27;3!CL:0000990;8.88e-21;8!CL:0000451;3.89e-17;10!CL:0000182;1.54e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.70e-37,5;CL:0002619,3.11e-27,3;CL:0000990,8.88e-21,8;CL:0000451,3.90e-17,10;CL:0000182,1.52e-07,12 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.90e-19!115;UBERON:0002106!6.37e-07!3;UBERON:0004854!6.37e-07!3;UBERON:0009034!6.37e-07!3;UBERON:0002095!6.37e-07!3;UBERON:0004782!6.37e-07!3;UBERON:0003281!6.37e-07!3;UBERON:0009664!6.37e-07!3;UBERON:0002296!6.37e-07!3;UBERON:0005602!6.37e-07!3;UBERON:0001179!6.37e-07!3;UBERON:0006293!6.37e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!2.90e-19!115;UBERON:0002106!6.37e-07!3;UBERON:0004854!6.37e-07!3;UBERON:0009034!6.37e-07!3;UBERON:0002095!6.37e-07!3;UBERON:0004782!6.37e-07!3;UBERON:0003281!6.37e-07!3;UBERON:0009664!6.37e-07!3;UBERON:0002296!6.37e-07!3;UBERON:0005602!6.37e-07!3;UBERON:0001179!6.37e-07!3;UBERON:0006293!6.37e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.80e-10;19!UBERON:0006925;4.80e-10;19!UBERON:0002423;8.92e-08;25 | |ontology_enrichment_uberon_v019=UBERON:0002107;4.80e-10;19!UBERON:0006925;4.80e-10;19!UBERON:0002423;8.92e-08;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.72e-10,19;UBERON:0006925,4.72e-10,19;UBERON:0008836,4.72e-10,19;UBERON:0008835,9.18e-09,22;UBERON:0003894,9.18e-09,22;UBERON:0009854,2.08e-08,23;UBERON:0007499,8.82e-08,25;UBERON:0009497,8.82e-08,25;UBERON:0000015,8.82e-08,25;UBERON:0002423,8.82e-08,25;UBERON:0006235,8.82e-08,25;UBERON:0004161,8.82e-08,25;UBERON:0009856,1.67e-07,26 | |||
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| ||
|short_description=p5@CHID1 | |short_description=p5@CHID1 | ||
}} | }} |
Latest revision as of 01:20, 25 September 2015
Short description: | p5@CHID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHID1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -149bp_to_ENST00000449825, ENST00000533056, NM_001142675, uc010qww.1_5end |
EntrezGene: | CHID1 |
HGNC: | 28474 |
UniProt: | Q9BWS9E9PRL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 9.70e-37 | 5 |
adult endothelial progenitor cell | 3.11e-27 | 3 |
conventional dendritic cell | 8.88e-21 | 8 |
dendritic cell | 3.90e-17 | 10 |
hepatocyte | 1.52e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.72e-10 | 19 |
digestive gland | 4.72e-10 | 19 |
liver bud | 4.72e-10 | 19 |
hepatic diverticulum | 9.18e-09 | 22 |
liver primordium | 9.18e-09 | 22 |
digestive tract diverticulum | 2.08e-08 | 23 |
epithelial sac | 8.82e-08 | 25 |
epithelium of foregut-midgut junction | 8.82e-08 | 25 |
anatomical boundary | 8.82e-08 | 25 |
hepatobiliary system | 8.82e-08 | 25 |
foregut-midgut junction | 8.82e-08 | 25 |
septum transversum | 8.82e-08 | 25 |
sac | 1.67e-07 | 26 |