FFCP PHASE1:Hg19::chr11:59824099..59824106,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=932 | |EntrezGene=932 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7317 | |HGNC=7317 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTP8,Q96HJ5 | |UniProt=A8MTP8,Q96HJ5 | ||
|association_with_transcript=0bp_to_ENST00000358152,ENST00000528298,NM_001031666,NM_001031809,NM_006138,uc001nom.2,uc001non.2,uc001noo.2_5end | |association_with_transcript=0bp_to_ENST00000358152,ENST00000528298,NM_001031666,NM_001031809,NM_006138,uc001nom.2,uc001non.2,uc001noo.2_5end | ||
|cluster_id=chr11:59824099..59824106,+ | |||
|coexpression_cluster_id=C3166 | |coexpression_cluster_id=C3166 | ||
|description=CAGE_peak_3_at_MS4A3_5end | |description=CAGE_peak_3_at_MS4A3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000763!7.21e-26!112;CL:0000049!7.21e-26!112;CL:0000037!3.68e-18!172;CL:0000566!3.68e-18!172;CL:0000988!7.32e-17!182;CL:0002032!6.36e-16!165;CL:0000837!6.36e-16!165;CL:0002274!2.55e-10!5;CL:0000457!2.55e-10!5;CL:0002191!2.55e-10!5;CL:0000097!2.55e-10!5;CL:0000831!2.55e-10!5;CL:0002028!2.55e-10!5;CL:0001024!3.78e-07!1 | |ontology_enrichment_celltype=CL:0000763!7.21e-26!112;CL:0000049!7.21e-26!112;CL:0000037!3.68e-18!172;CL:0000566!3.68e-18!172;CL:0000988!7.32e-17!182;CL:0002032!6.36e-16!165;CL:0000837!6.36e-16!165;CL:0002274!2.55e-10!5;CL:0000457!2.55e-10!5;CL:0002191!2.55e-10!5;CL:0000097!2.55e-10!5;CL:0000831!2.55e-10!5;CL:0002028!2.55e-10!5;CL:0001024!3.78e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000037;1.61e-14;1!CL:0001024;1.61e-14;1!CL:0000771;8.60e-08;2 | |ontology_enrichment_celltype_v019=CL:0000037;1.61e-14;1!CL:0001024;1.61e-14;1!CL:0000771;8.60e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.84e-14,1;CL:0000763,4.03e-11,108;CL:0000049,4.03e-11,108;CL:0000037,2.98e-08,168;CL:0000771,8.60e-08,2;CL:0000988,9.15e-08,177;CL:0002032,4.34e-07,161;CL:0000837,4.34e-07,161 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:8692!6.27e-62!31;DOID:1240!2.22e-48!39;DOID:2531!5.07e-36!51;DOID:0060083!5.07e-36!51;DOID:1036!3.65e-11!8;DOID:0050686!1.03e-10!137;DOID:225!3.36e-07!1;DOID:9119!6.76e-07!1;DOID:8552!8.49e-07!1 | |ontology_enrichment_disease=DOID:8692!6.27e-62!31;DOID:1240!2.22e-48!39;DOID:2531!5.07e-36!51;DOID:0060083!5.07e-36!51;DOID:1036!3.65e-11!8;DOID:0050686!1.03e-10!137;DOID:225!3.36e-07!1;DOID:9119!6.76e-07!1;DOID:8552!8.49e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.24e-33;31!DOID:1240;2.52e-22;39!DOID:225;1.61e-14;1!DOID:2531;1.67e-14;51!DOID:0060083;1.67e-14;51!DOID:74;6.57e-08;2 | |ontology_enrichment_disease_v019=DOID:8692;1.24e-33;31!DOID:1240;2.52e-22;39!DOID:225;1.61e-14;1!DOID:2531;1.67e-14;51!DOID:0060083;1.67e-14;51!DOID:74;6.57e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,6.14e-34,31;DOID:1240,8.18e-27,39;DOID:2531,2.64e-20,51;DOID:0060083,2.64e-20,51;DOID:225,1.41e-14,1;DOID:74,6.15e-08,2;DOID:0050686,6.96e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.714695326373367,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,4.54371697741767,0,0,0.481764225311099,2.62339619348362,0,2.74804275804612,8.90998216494528,7.82866377623456,8.34245708559543,3.32159762183469,0,0,0.811367035427949,0.66614393599564,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7661645152181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.225595660617181,0.19606253431774,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77398497204766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,3.95076127162616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0.207328115540772,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.714695326373367,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0.228234679033192,4.54371697741767,0,0,0.481764225311099,2.62339619348362,0,2.74804275804612,8.90998216494528,7.82866377623456,8.34245708559543,3.32159762183469,0,0,0.811367035427949,0.66614393599564,2.81974010175699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7661645152181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332423363800313,0.225595660617181,0.19606253431774,0,0,0.635746315921515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77398497204766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129177819672012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@MS4A3 | |short_description=p3@MS4A3 | ||
}} | }} |
Latest revision as of 12:50, 18 September 2015
Short description: | p3@MS4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MS4A3_5end |
Coexpression cluster: | C3166_acute_biphenotypic_Basophils_myelodysplastic_CD34_CD133_leukemia |
Association with transcript: | 0bp_to_ENST00000358152, ENST00000528298, NM_001031666, NM_001031809, NM_006138, uc001nom.2, uc001non.2, uc001noo.2_5end |
EntrezGene: | MS4A3 |
HGNC: | 7317 |
UniProt: | A8MTP8Q96HJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.84e-14 | 1 |
myeloid cell | 4.03e-11 | 108 |
common myeloid progenitor | 4.03e-11 | 108 |
hematopoietic stem cell | 2.98e-08 | 168 |
eosinophil | 8.60e-08 | 2 |
hematopoietic cell | 9.15e-08 | 177 |
hematopoietic oligopotent progenitor cell | 4.34e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.34e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 6.14e-34 | 31 |
leukemia | 8.18e-27 | 39 |
hematologic cancer | 2.64e-20 | 51 |
immune system cancer | 2.64e-20 | 51 |
syndrome | 1.41e-14 | 1 |
hematopoietic system disease | 6.15e-08 | 2 |
organ system cancer | 6.96e-07 | 137 |