FFCP PHASE1:Hg19::chr3:24206665..24206674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7068 | |EntrezGene=7068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11799 | |HGNC=11799 | ||
|TSSclassifier=strong | |||
|UniProt=P10828 | |UniProt=P10828 | ||
|association_with_transcript=275bp_to_X74497_5end | |association_with_transcript=275bp_to_X74497_5end | ||
|cluster_id=chr3:24206665..24206674,- | |||
|coexpression_cluster_id=C126 | |coexpression_cluster_id=C126 | ||
|description=CAGE_peak_21_at_THRB_5end | |description=CAGE_peak_21_at_THRB_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!4.87e-46!3;CL:0002535!4.02e-09!2 | |ontology_enrichment_celltype=CL:0002541!4.87e-46!3;CL:0002535!4.02e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002535;5.15e-21;2 | |ontology_enrichment_celltype_v019=CL:0002535;5.15e-21;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002535,4.66e-21,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5409;3.26e-11;4!DOID:4362;3.10e-09;5!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | |ontology_enrichment_disease_v019=DOID:5409;3.26e-11;4!DOID:4362;3.10e-09;5!DOID:1325;5.86e-07;7!DOID:3904;5.86e-07;7 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,3.79e-11,4;DOID:4362,2.97e-09,5;DOID:1325,6.39e-07,7;DOID:3904,6.39e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000476!4.87e-46!3;UBERON:0000920!4.87e-46!3;UBERON:0000007!5.37e-32!2;UBERON:0003124!3.44e-20!7;UBERON:0003296!1.53e-16!4;UBERON:0010133!1.53e-16!4;UBERON:0002022!3.07e-16!1;UBERON:0005631!2.03e-10!14;UBERON:0000158!2.03e-10!14;UBERON:0001894!7.31e-10!7;UBERON:0006222!7.31e-10!7;UBERON:0006955!4.02e-09!2;UBERON:0004801!4.02e-09!2;UBERON:0002780!4.38e-09!41;UBERON:0001890!4.38e-09!41;UBERON:0006240!4.38e-09!41;UBERON:0003080!7.13e-09!42;UBERON:0003056!1.37e-08!61;UBERON:0001950!5.01e-07!20 | |ontology_enrichment_uberon=UBERON:0000476!4.87e-46!3;UBERON:0000920!4.87e-46!3;UBERON:0000007!5.37e-32!2;UBERON:0003124!3.44e-20!7;UBERON:0003296!1.53e-16!4;UBERON:0010133!1.53e-16!4;UBERON:0002022!3.07e-16!1;UBERON:0005631!2.03e-10!14;UBERON:0000158!2.03e-10!14;UBERON:0001894!7.31e-10!7;UBERON:0006222!7.31e-10!7;UBERON:0006955!4.02e-09!2;UBERON:0004801!4.02e-09!2;UBERON:0002780!4.38e-09!41;UBERON:0001890!4.38e-09!41;UBERON:0006240!4.38e-09!41;UBERON:0003080!7.13e-09!42;UBERON:0003056!1.37e-08!61;UBERON:0001950!5.01e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;5.21e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0006955;5.15e-21;2!UBERON:0004801;5.15e-21;2!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6 | |ontology_enrichment_uberon_v019=UBERON:0000007;5.21e-79;2!UBERON:0003296;3.31e-40;4!UBERON:0010133;3.31e-40;4!UBERON:0001894;1.61e-23;7!UBERON:0006955;5.15e-21;2!UBERON:0004801;5.15e-21;2!UBERON:0000002;6.55e-08;6!UBERON:0001560;6.55e-08;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,3.49e-79,2;UBERON:0003296,2.71e-40,4;UBERON:0010133,2.71e-40,4;UBERON:0001894,1.44e-23,7;UBERON:0006222,1.44e-23,7;UBERON:0006955,4.66e-21,2;UBERON:0004801,4.66e-21,2;UBERON:0000002,6.34e-08,6;UBERON:0001560,6.34e-08,6 | |||
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|short_description=p21@THRB | |short_description=p21@THRB | ||
}} | }} |
Latest revision as of 20:06, 17 September 2015
Short description: | p21@THRB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_THRB_5end |
Coexpression cluster: | C126_gastrointestinal_argyrophil_smallcell_merkel_bile_insula_brain |
Association with transcript: | 275bp_to_X74497_5end |
EntrezGene: | THRB |
HGNC: | 11799 |
UniProt: | P10828 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 4.66e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 3.49e-79 | 2 |
gland of diencephalon | 2.71e-40 | 4 |
neuroendocrine gland | 2.71e-40 | 4 |
diencephalon | 1.44e-23 | 7 |
future diencephalon | 1.44e-23 | 7 |
uterine epithelium | 4.66e-21 | 2 |
cervix epithelium | 4.66e-21 | 2 |
uterine cervix | 6.34e-08 | 6 |
neck of organ | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 3.79e-11 | 4 |
cervical cancer | 2.97e-09 | 5 |
bronchus cancer | 6.39e-07 | 7 |
bronchogenic carcinoma | 6.39e-07 | 7 |