FFCP PHASE1:Hg19::chr6:7541845..7541878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1832 | |EntrezGene=1832 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3052 | |HGNC=3052 | ||
|TSSclassifier=strong | |||
|UniProt=P15924 | |UniProt=P15924 | ||
|association_with_transcript=0bp_to_ENST00000418664,NM_001008844,NM_004415,uc003mxp.1,uc003mxq.1_5end | |association_with_transcript=0bp_to_ENST00000418664,NM_001008844,NM_004415,uc003mxp.1,uc003mxq.1_5end | ||
|cluster_id=chr6:7541845..7541878,+ | |||
|coexpression_cluster_id=C4626 | |coexpression_cluster_id=C4626 | ||
|description=CAGE_peak_2_at_DSP_5end | |description=CAGE_peak_2_at_DSP_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.13e-34!254;CL:0000223!4.62e-19!59;CL:0002076!8.75e-17!43;CL:0002251!4.74e-09!21;CL:0002368!5.67e-07!13 | |ontology_enrichment_celltype=CL:0000066!1.13e-34!254;CL:0000223!4.62e-19!59;CL:0002076!8.75e-17!43;CL:0002251!4.74e-09!21;CL:0002368!5.67e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.06e-13;42!CL:0002251;6.74e-10;20!CL:0002368;2.36e-07;13 | |ontology_enrichment_celltype_v019=CL:0002076;1.06e-13;42!CL:0002251;6.74e-10;20!CL:0002368;2.36e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.94e-36,253;CL:0000223,6.06e-21,58;CL:0002076,2.58e-18,42;CL:0002251,6.59e-10,20;CL:0002368,2.32e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;3.10e-11;58!UBERON:0006595;1.64e-08;86 | |ontology_enrichment_development_v019=CL:0000223;3.10e-11;58!UBERON:0006595;1.64e-08;86 | ||
|ontology_enrichment_disease=DOID:305!1.11e-21!106;DOID:0050687!3.73e-14!143;DOID:299!1.90e-07!25 | |ontology_enrichment_disease=DOID:305!1.11e-21!106;DOID:0050687!3.73e-14!143;DOID:299!1.90e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:305;9.31e-08;106!DOID:299;1.04e-07;25!DOID:1749;9.52e-07;14 | |ontology_enrichment_disease_v019=DOID:305;9.31e-08;106!DOID:299;1.04e-07;25!DOID:1749;9.52e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.74e-23,106;DOID:0050687,1.68e-15,143;DOID:299,9.46e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.02e-22!169;UBERON:0000925!1.02e-22!169;UBERON:0006595!1.02e-22!169;UBERON:0001007!3.89e-18!155;UBERON:0001555!3.89e-18!155;UBERON:0007026!3.89e-18!155;UBERON:0004921!1.25e-16!129;UBERON:0004185!1.25e-16!129;UBERON:0000077!3.66e-16!130;UBERON:0000062!3.00e-15!511;UBERON:0000466!2.14e-14!126;UBERON:0000468!4.35e-14!659;UBERON:0001041!2.06e-13!98;UBERON:0001004!1.72e-12!72;UBERON:0000464!2.73e-12!104;UBERON:0000481!1.38e-11!347;UBERON:0000064!1.38e-11!219;UBERON:0000475!2.20e-11!365;UBERON:0001048!2.48e-11!168;UBERON:0009569!1.08e-10!113;UBERON:0000467!1.68e-10!625;UBERON:0000480!2.77e-10!626;UBERON:0005911!3.21e-10!82;UBERON:0003104!4.42e-10!238;UBERON:0009142!4.42e-10!238;UBERON:0000065!3.49e-09!53;UBERON:0005177!3.19e-08!107;UBERON:0002553!3.99e-08!70;UBERON:0000922!2.47e-07!612;UBERON:0008947!3.11e-07!38;UBERON:0003258!3.11e-07!38;UBERON:0004923!6.00e-07!57;UBERON:0005631!7.99e-07!14;UBERON:0000158!7.99e-07!14;UBERON:0002365!8.10e-07!31;UBERON:0002330!8.10e-07!31;UBERON:0002530!8.20e-07!59;UBERON:0000915!9.15e-07!52 | |ontology_enrichment_uberon=UBERON:0004119!1.02e-22!169;UBERON:0000925!1.02e-22!169;UBERON:0006595!1.02e-22!169;UBERON:0001007!3.89e-18!155;UBERON:0001555!3.89e-18!155;UBERON:0007026!3.89e-18!155;UBERON:0004921!1.25e-16!129;UBERON:0004185!1.25e-16!129;UBERON:0000077!3.66e-16!130;UBERON:0000062!3.00e-15!511;UBERON:0000466!2.14e-14!126;UBERON:0000468!4.35e-14!659;UBERON:0001041!2.06e-13!98;UBERON:0001004!1.72e-12!72;UBERON:0000464!2.73e-12!104;UBERON:0000481!1.38e-11!347;UBERON:0000064!1.38e-11!219;UBERON:0000475!2.20e-11!365;UBERON:0001048!2.48e-11!168;UBERON:0009569!1.08e-10!113;UBERON:0000467!1.68e-10!625;UBERON:0000480!2.77e-10!626;UBERON:0005911!3.21e-10!82;UBERON:0003104!4.42e-10!238;UBERON:0009142!4.42e-10!238;UBERON:0000065!3.49e-09!53;UBERON:0005177!3.19e-08!107;UBERON:0002553!3.99e-08!70;UBERON:0000922!2.47e-07!612;UBERON:0008947!3.11e-07!38;UBERON:0003258!3.11e-07!38;UBERON:0004923!6.00e-07!57;UBERON:0005631!7.99e-07!14;UBERON:0000158!7.99e-07!14;UBERON:0002365!8.10e-07!31;UBERON:0002330!8.10e-07!31;UBERON:0002530!8.20e-07!59;UBERON:0000915!9.15e-07!52 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;1.20e-08;33!UBERON:0002365;1.42e-07;31!UBERON:0002330;1.42e-07;31!UBERON:0000065;4.87e-07;44 | |ontology_enrichment_uberon_v019=UBERON:0004921;1.20e-08;33!UBERON:0002365;1.42e-07;31!UBERON:0002330;1.42e-07;31!UBERON:0000065;4.87e-07;44 | ||
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|phase1_expression=36.3356758541113,15.8434387679328,12.2630331563495,22.0161256376887,3.5756887554183,8.72338524100369,0,0.631719873426831,0.261185628199839,10.8122932060664,24.423040879035,30.5817920982241,32.4433383220998,0.123766352960047,0,1.34465029290355,0,1.46062018077475,0.487932798790507,0.123121058076788,0,0.313454721478088,0.85870796139317,0.547497700291537,2.76193807108566,0,0,0,0,0,2.16742572642506,57.9235371421724,56.626712730311,48.0680213216824,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,19.3727840842678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76171156811282,3.44045905312706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,0,1.00267582127178,0.579386075843295,0,0.973269740605272,1.98523116044542,5.5432349365641,3.24988707064566,4.84622579341537,62.6587895863173,120.134159462155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,1.67360306382335,2.41697590265488,3.04108842287405,11.2268546472158,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,74.5720829163734,35.7819805220629,3.03913227994991,5.56118559415519,1.14734648299525,0,7.28880880184999,26.6872489324262,17.5133959376184,0,0.269421344139376,0.163461903113459,1.36221684880438,6.91411109375999,0,0.624320153660641,2.2818872861778,0,0.352303495931295,0.971237666208789,0,0,0,0,0,3.21447008062124,0,0,0,0,0,4.38977620880838,5.21029252858333,7.06118876861005,1.58805056424029,14.7099501264867,2.98980344345994,3.17897851739343,22.2067411102458,3.40073346486848,21.3841648237872,6.14185625894246,17.5527385530917,7.69752340773469,29.7871853608055,4.05019554026117,4.52608959092673,20.5905563659636,6.64963848302426,4.23901480776219,100.882165351241,97.370365050928,99.2343900045953,10.4897387271452,10.6023814657188,16.0347641159935,18.2443456827052,20.4379889209259,14.964071722109,6.25798129319264,3.21620469096443,0,1.85747171212792,3.60939740834793,18.8107812063352,20.5673321895284,19.0398713607951,17.9779175553802,18.5197527478545,18.9816495288877,19.1460457587433,20.995696768412,21.9305879459443,0,4.20725321410337,1.2347220339942,0,41.8291614912042,44.2272247504932,50.8079319746008,0,46.4896297692969,2.05881372358231,231.353601641383,50.5807889659288,72.3808601363742,142.95655932477,0,0,1.44331342025273,1.97081688457631,21.0161562682121,2.16549671641611,0.925971025153221,5.70762456703795,50.5730814693936,42.9243081047436,0,0.936017060556951,1.33768046059855,44.9922403136529,72.2323151255096,61.1050669114686,75.6769516839068,69.4615113048369,54.0569577622948,0,0,1.24396869324463,1.29707958075265,1.38866676769018,0.380987365753014,0.381988425558278,0,5.13217338068116,0,0,0.285826432630578,1.79409734952577,2.61576041299968,2.933531432838,11.5051827024422,0,0,13.0309677126587,11.4408180602503,0,1.41849132023278,0.266422179016099,0,0,0,0,0,0,4.52159065589379,4.35766729300147,6.19832545328754,0,0.502257091432126,0,65.1779606937105,28.7154839585285,9.98458335285029,13.1750989067497,1.84928690295345,11.2808406841134,0,0.197030760201927,0,0.128343036279748,0,0,0,0.502548796003046,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,22.0449113222656,19.9840467452821,23.3399574250223,17.4540708339143,6.62081419400982,11.3703752027992,6.2083842775503,27.8974751384883,12.1683651237524,0,0.783204629850962,1.02943027143257,0.620304078368662,0.431428401637234,0.106727557803444,44.2566254311539,19.9722527412596,29.6342487463087,39.2010336353667,110.185696820829,17.4009258548506,12.5576366270587,14.8395102229344,23.9672342503975,5.93672265779964,2.62156479464514,5.50441348470694,0.9033987161519,0,1.16210378459959,53.419876719497,78.3980298885844,112.522968479665,0,0,0.131124414959424,20.3039825808335,37.3524384956412,16.471345152714,7.30696123266303,27.4434235121477,0,0.170093705276516,13.8186186305369,12.3381802152231,7.31555381368403,15.0506932156456,13.253566198342,16.6215201785745,9.40273969833149,0,0,3.59030175162945,4.26419039409617,5.20605431462885,47.6049473812477,0.0915694648183434,0,80.9714408574603,66.9562053417617,0,0.386682873168488,0,0.307007349452259,0.551346289938122,0,0.290033387828457,0.340906509664404,2.58192903375538,87.2704353105964,133.572096818749,118.552209907469,138.080370867826,1.39453664789186,5.66662224295152,0,0,5.32306030317022,0,0.37064843820784,11.4499909393593,2.232950216158,0.632758849437452,0.38126038784765,0,0.855877976067841,0,0.78494864019923,0,0.274537029736055,0,3.63928466831969,1.58510321173008,0.421258456238981,0,2.43713489631284,0,0.409499734223957,0,1.13008116620243,2.2054613741845,1.99031692572366,3.06915619677634,0,0,1.82619339266434,2.16876448669825,1.12678241012897,0.143411352204052,0.0982490410131212,2.49669736036875,0,0.633322905892992,1.64647446479951,0,0,55.9050474935225,52.9538797673272,46.8231234903687,46.7894689860592,27.1218384782875,72.442734537079,105.979806695265,120.604785108654,0,0,0,0,0,0,0,0,59.2873594757476,0,91.1549603449438,0,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| ||
|short_description=p2@DSP | |short_description=p2@DSP | ||
}} | }} |
Latest revision as of 18:49, 19 September 2015
Short description: | p2@DSP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DSP_5end |
Coexpression cluster: | C4626_salivary_amniotic_choriocarcinoma_Keratinocyte_maxillary_cervical_esophagus |
Association with transcript: | 0bp_to_ENST00000418664, NM_001008844, NM_004415, uc003mxp.1, uc003mxq.1_5end |
EntrezGene: | DSP |
HGNC: | 3052 |
UniProt: | P15924 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.94e-36 | 253 |
endodermal cell | 6.06e-21 | 58 |
endo-epithelial cell | 2.58e-18 | 42 |
epithelial cell of alimentary canal | 6.59e-10 | 20 |
respiratory epithelial cell | 2.32e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.80e-25 | 160 |
endoderm | 5.80e-25 | 160 |
presumptive endoderm | 5.80e-25 | 160 |
digestive system | 2.54e-20 | 145 |
digestive tract | 2.54e-20 | 145 |
primitive gut | 2.54e-20 | 145 |
subdivision of digestive tract | 2.70e-18 | 118 |
foregut | 4.93e-15 | 87 |
respiratory system | 1.81e-13 | 74 |
subdivision of trunk | 7.00e-12 | 112 |
endo-epithelium | 2.45e-11 | 82 |
primordium | 4.41e-11 | 160 |
respiratory tract | 1.23e-09 | 54 |
trunk region element | 1.46e-09 | 101 |
respiratory primordium | 8.65e-08 | 38 |
endoderm of foregut | 8.65e-08 | 38 |
exocrine gland | 1.09e-07 | 31 |
exocrine system | 1.09e-07 | 31 |
gland | 1.12e-07 | 59 |
extraembryonic membrane | 3.35e-07 | 14 |
membranous layer | 3.35e-07 | 14 |
segment of respiratory tract | 6.11e-07 | 47 |
thoracic segment of trunk | 6.76e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.74e-23 | 106 |
cell type cancer | 1.68e-15 | 143 |
adenocarcinoma | 9.46e-08 | 25 |