FFCP PHASE1:Hg19::chr11:68458387..68458424,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51083 | |EntrezGene=51083 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4114 | |HGNC=4114 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2S1 | |UniProt=Q9Y2S1 | ||
|association_with_transcript=461bp_to_AF077047_5end | |association_with_transcript=461bp_to_AF077047_5end | ||
|cluster_id=chr11:68458387..68458424,+ | |||
|coexpression_cluster_id=C196 | |coexpression_cluster_id=C196 | ||
|description=CAGE_peak_3_at_GAL_5end | |description=CAGE_peak_3_at_GAL_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000039!4.40e-11!7;CL:0000586!4.40e-11!7;CL:0000235!1.41e-09!10;CL:0000066!8.45e-09!254;CL:0002322!1.10e-07!5;CL:0002150!4.47e-07!3;CL:0000861!4.47e-07!3 | |ontology_enrichment_celltype=CL:0000039!4.40e-11!7;CL:0000586!4.40e-11!7;CL:0000235!1.41e-09!10;CL:0000066!8.45e-09!254;CL:0002322!1.10e-07!5;CL:0002150!4.47e-07!3;CL:0000861!4.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.05e-25;7!CL:0000586;1.05e-25;7!CL:0000540;1.48e-17;6!CL:0000404;1.48e-17;6!CL:0002144;1.42e-15;3!CL:0002322;1.01e-09;5!CL:0002321;3.28e-07;15 | |ontology_enrichment_celltype_v019=CL:0000039;1.05e-25;7!CL:0000586;1.05e-25;7!CL:0000540;1.48e-17;6!CL:0000404;1.48e-17;6!CL:0002144;1.42e-15;3!CL:0002322;1.01e-09;5!CL:0002321;3.28e-07;15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.05e-25,7;CL:0000586,1.05e-25,7;CL:0000540,1.09e-17,6;CL:0000031,1.09e-17,6;CL:0000404,1.09e-17,6;CL:0002144,1.42e-15,3;CL:0000047,2.03e-13,8;CL:0002322,1.21e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.27e-18;10!UBERON:0005564;4.27e-18;10!CL:0000031;1.48e-17;6 | |ontology_enrichment_development_v019=UBERON:0009117;4.27e-18;10!UBERON:0005564;4.27e-18;10!CL:0000031;1.48e-17;6 | ||
|ontology_enrichment_disease=DOID:3095!1.29e-11!22;DOID:2994!1.29e-11!22;DOID:0050687!8.92e-11!143;DOID:305!9.49e-10!106;DOID:162!1.19e-07!235;DOID:14566!2.88e-07!239 | |ontology_enrichment_disease=DOID:3095!1.29e-11!22;DOID:2994!1.29e-11!22;DOID:0050687!8.92e-11!143;DOID:305!9.49e-10!106;DOID:162!1.19e-07!235;DOID:14566!2.88e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3095;1.21e-12;22!DOID:2994;1.21e-12;22 | |ontology_enrichment_disease_v019=DOID:3095;1.21e-12;22!DOID:2994;1.21e-12;22 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,1.18e-12,22;DOID:2994,1.18e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.02e-15!9;UBERON:0003101!3.01e-08!22;UBERON:0000079!3.01e-08!22;UBERON:0000473!2.04e-07!8 | |ontology_enrichment_uberon=UBERON:0001737!4.02e-15!9;UBERON:0003101!3.01e-08!22;UBERON:0000079!3.01e-08!22;UBERON:0000473!2.04e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.54e-22;8!UBERON:0003135;1.77e-16;11!UBERON:0010523;1.42e-15;3!UBERON:0001915;1.42e-15;3!UBERON:0001982;1.42e-15;3!UBERON:0003101;1.21e-12;22!UBERON:0000079;1.21e-12;22!UBERON:0000991;9.68e-09;21 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.54e-22;8!UBERON:0003135;1.77e-16;11!UBERON:0010523;1.42e-15;3!UBERON:0001915;1.42e-15;3!UBERON:0001982;1.42e-15;3!UBERON:0003101;1.21e-12;22!UBERON:0000079;1.21e-12;22!UBERON:0000991;9.68e-09;21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.55e-22,8;UBERON:0003135,1.77e-16,11;UBERON:0010523,1.42e-15,3;UBERON:0001915,1.42e-15,3;UBERON:0001982,1.42e-15,3;UBERON:0003101,1.21e-12,22;UBERON:0000079,1.21e-12,22;UBERON:0000991,9.69e-09,21;UBERON:0009196,9.69e-09,21;UBERON:0009117,9.69e-09,21;UBERON:0005564,9.69e-09,21;UBERON:0004176,2.37e-08,22 | |||
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| ||
|short_description=p3@GAL | |short_description=p3@GAL | ||
}} | }} |
Latest revision as of 20:27, 19 September 2015
Short description: | p3@GAL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAL_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | 461bp_to_AF077047_5end |
EntrezGene: | GAL |
HGNC: | 4114 |
UniProt: | Q9Y2S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.05e-25 | 7 |
germ cell | 1.05e-25 | 7 |
neuron | 1.09e-17 | 6 |
neuroblast | 1.09e-17 | 6 |
electrically signaling cell | 1.09e-17 | 6 |
capillary endothelial cell | 1.42e-15 | 3 |
neuronal stem cell | 2.03e-13 | 8 |
embryonic stem cell | 1.21e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.55e-22 | 8 |
male reproductive organ | 1.77e-16 | 11 |
microcirculatory vessel | 1.42e-15 | 3 |
endothelium of capillary | 1.42e-15 | 3 |
capillary | 1.42e-15 | 3 |
male organism | 1.21e-12 | 22 |
male reproductive system | 1.21e-12 | 22 |
gonad | 9.69e-09 | 21 |
indifferent external genitalia | 9.69e-09 | 21 |
indifferent gonad | 9.69e-09 | 21 |
gonad primordium | 9.69e-09 | 21 |
external genitalia | 2.37e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.18e-12 | 22 |
germ cell cancer | 1.18e-12 | 22 |