FFCP PHASE1:Hg19::chr22:38539487..38539506,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:38539487..38539506,-
|short_description=p6@PLA2G6
|description=CAGE_peak_6_at_PLA2G6_5end
|association_with_transcript=0bp_to_ENST00000498338_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8398 | |EntrezGene=8398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9039 | |HGNC=9039 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000498338_5end | |||
|cluster_id=chr22:38539487..38539506,- | |||
|coexpression_cluster_id=C4100 | |||
|description=CAGE_peak_6_at_PLA2G6_5end | |||
|id=chr22:38539487..38539506,- | |||
|ontology_enrichment_celltype=CL:0000037!4.33e-17!172;CL:0000566!4.33e-17!172;CL:0000988!1.47e-15!182;CL:0000763!5.56e-15!112;CL:0000049!5.56e-15!112;CL:0002032!7.58e-15!165;CL:0000837!7.58e-15!165;CL:0000623!5.74e-10!3;CL:0000825!5.74e-10!3;CL:0000767!1.08e-09!3;CL:0000842!2.18e-09!3;CL:0000738!2.39e-09!140;CL:0000224!4.06e-07!4;CL:0000766!9.34e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000623;3.26e-31;3!CL:0000767;2.02e-30;3!CL:0000094;3.44e-20;8!CL:0000081;9.23e-15;11!CL:0000226;5.39e-14;3!CL:0000842;5.39e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.27e-31,3;CL:0000825,3.27e-31,3;CL:0000767,3.03e-30,3;CL:0000094,4.00e-20,8;CL:0000081,1.03e-14,11;CL:0000037,1.41e-14,168;CL:0000226,8.57e-14,3;CL:0000842,8.57e-14,3;CL:0000988,1.04e-13,177;CL:0002032,1.23e-11,161;CL:0000837,1.23e-11,161;CL:0000763,1.74e-09,108;CL:0000049,1.74e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.88e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.48e-14;31!DOID:9119;9.57e-12;1!DOID:8552;1.60e-11;1!DOID:1240;1.46e-08;39!DOID:2531;4.80e-07;51!DOID:0060083;4.80e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.87e-15,31;DOID:1240,5.36e-12,39;DOID:9119,8.62e-12,1;DOID:8552,1.78e-11,1;DOID:2531,5.22e-09,51;DOID:0060083,5.22e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!4.20e-14!15;UBERON:0000179!4.20e-14!15;UBERON:0000463!4.20e-14!15;UBERON:0002390!9.19e-13!102;UBERON:0003061!9.19e-13!102;UBERON:0002193!5.33e-12!112;UBERON:0004177!8.11e-09!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.85e-16;15!UBERON:0000179;2.85e-16;15!UBERON:0000463;2.85e-16;15!UBERON:0002390;1.49e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.86e-16,15;UBERON:0000179,2.86e-16,15;UBERON:0000463,2.86e-16,15 | |||
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| ||
|short_description=p6@PLA2G6 | |||
}} | }} |
Latest revision as of 07:28, 20 September 2015
Short description: | p6@PLA2G6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PLA2G6_5end |
Coexpression cluster: | C4100_chronic_Basophils_acute_Natural_Whole_CD34_leukemia |
Association with transcript: | 0bp_to_ENST00000498338_5end |
EntrezGene: | PLA2G6 |
HGNC: | 9039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.27e-31 | 3 |
pro-NK cell | 3.27e-31 | 3 |
basophil | 3.03e-30 | 3 |
granulocyte | 4.00e-20 | 8 |
blood cell | 1.03e-14 | 11 |
hematopoietic stem cell | 1.41e-14 | 168 |
single nucleate cell | 8.57e-14 | 3 |
mononuclear cell | 8.57e-14 | 3 |
hematopoietic cell | 1.04e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.23e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-11 | 161 |
myeloid cell | 1.74e-09 | 108 |
common myeloid progenitor | 1.74e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 2.86e-16 | 15 |
haemolymphatic fluid | 2.86e-16 | 15 |
organism substance | 2.86e-16 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.87e-15 | 31 |
leukemia | 5.36e-12 | 39 |
acute myeloid leukemia | 8.62e-12 | 1 |
chronic myeloid leukemia | 1.78e-11 | 1 |
hematologic cancer | 5.22e-09 | 51 |
immune system cancer | 5.22e-09 | 51 |